RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 DNAH3Q8TD57 4116 aa6.54□□□□□ -1.36
DDX54-202ENST00000314045 DNAH2Q9P225 4427 aa6.54□□□□□ -1.36
DDX54-202ENST00000314045 NDUFAF8A1L188 74 aa6.51□□□□□ -1.37
DDX54-202ENST00000314045 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
DDX54-202ENST00000314045 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
DDX54-202ENST00000314045 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
DDX54-202ENST00000314045 RYR1P21817 5038 aa6.48□□□□□ -1.37
DDX54-202ENST00000314045 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
DDX54-202ENST00000314045 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
DDX54-202ENST00000314045 CMYA5Q8N3K9 4069 aa6.44□□□□□ -1.38
DDX54-202ENST00000314045 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
DDX54-202ENST00000314045 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
DDX54-202ENST00000314045 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
DDX54-202ENST00000314045 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
DDX54-202ENST00000314045 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
DDX54-202ENST00000314045 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
DDX54-202ENST00000314045 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
DDX54-202ENST00000314045 RYR3Q15413 4870 aa6.37□□□□□ -1.39
DDX54-202ENST00000314045 LYSTQ99698 3801 aa6.36□□□□□ -1.39
DDX54-202ENST00000314045 DNAH8Q96JB1 4490 aa6.35□□□□□ -1.39
DDX54-202ENST00000314045 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.39
DDX54-202ENST00000314045 SACSQ9NZJ4 4579 aa6.34□□□□□ -1.4
DDX54-202ENST00000314045 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
DDX54-202ENST00000314045 APOBP04114 4563 aaKnown RBP6.25□□□□□ -1.41
DDX54-202ENST00000314045 RYR2Q92736 4967 aa6.24□□□□□ -1.41
DDX54-202ENST00000314045 VPS13BQ7Z7G8 4022 aa6.23□□□□□ -1.41
DDX54-202ENST00000314045 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
DDX54-202ENST00000314045 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
DDX54-202ENST00000314045 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
DDX54-202ENST00000314045 HYDINQ4G0P3 5121 aa6.18□□□□□ -1.42
DDX54-202ENST00000314045 DNAH7Q8WXX0 4024 aa6.18□□□□□ -1.42
DDX54-202ENST00000314045 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
DDX54-202ENST00000314045 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
DDX54-202ENST00000314045 DNAH6Q9C0G6 4158 aa6.17□□□□□ -1.42
DDX54-202ENST00000314045 HECTD4Q9Y4D8 3996 aa6.11□□□□□ -1.43
DDX54-202ENST00000314045 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
DDX54-202ENST00000314045 HERC2O95714 4834 aa6.07□□□□□ -1.44
DDX54-202ENST00000314045 KMT2CQ8NEZ4 4911 aaKnown RBP6.06□□□□□ -1.44
DDX54-202ENST00000314045 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
DDX54-202ENST00000314045 PKHD1P08F94 4074 aa6.04□□□□□ -1.44
DDX54-202ENST00000314045 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
DDX54-202ENST00000314045 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
DDX54-202ENST00000314045 MT1HP80294 61 aa5.94□□□□□ -1.46
DDX54-202ENST00000314045 HSPG2P98160 4391 aa5.93□□□□□ -1.46
DDX54-202ENST00000314045 PKD1P98161 4303 aa5.89□□□□□ -1.47
DDX54-202ENST00000314045 LRP2P98164 4655 aa5.87□□□□□ -1.47
DDX54-202ENST00000314045 MT2AP02795 61 aa5.83□□□□□ -1.48
DDX54-202ENST00000314045 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
DDX54-202ENST00000314045 EPPK1P58107 5090 aaKnown RBP5.77□□□□□ -1.49
DDX54-202ENST00000314045 MT1FP04733 61 aa5.74□□□□□ -1.49
DDX54-202ENST00000314045 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
DDX54-202ENST00000314045 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
DDX54-202ENST00000314045 HERC1Q15751 4861 aa5.66□□□□□ -1.5
DDX54-202ENST00000314045 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.5
DDX54-202ENST00000314045 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
DDX54-202ENST00000314045 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
DDX54-202ENST00000314045 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
DDX54-202ENST00000314045 LPAP08519 4548 aa5.57□□□□□ -1.52
DDX54-202ENST00000314045 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
DDX54-202ENST00000314045 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
DDX54-202ENST00000314045 TNXBP22105 4242 aa5.5□□□□□ -1.53
DDX54-202ENST00000314045 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.53
DDX54-202ENST00000314045 PKHD1L1Q86WI1 4243 aa5.45□□□□□ -1.54
DDX54-202ENST00000314045 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
DDX54-202ENST00000314045 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
DDX54-202ENST00000314045 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
DDX54-202ENST00000314045 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
DDX54-202ENST00000314045 MT1BP07438 61 aa5.32□□□□□ -1.56
DDX54-202ENST00000314045 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
DDX54-202ENST00000314045 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
DDX54-202ENST00000314045 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
DDX54-202ENST00000314045 RNF213Q63HN8 5207 aa5.25□□□□□ -1.57
DDX54-202ENST00000314045 MT1XP80297 61 aa5.25□□□□□ -1.57
DDX54-202ENST00000314045 UBR4Q5T4S7 5183 aa5.22□□□□□ -1.57
DDX54-202ENST00000314045 FLGP20930 4061 aaPredicted RBP5.22□□□□□ -1.57
DDX54-202ENST00000314045 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
DDX54-202ENST00000314045 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
DDX54-202ENST00000314045 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
DDX54-202ENST00000314045 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
DDX54-202ENST00000314045 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
DDX54-202ENST00000314045 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
DDX54-202ENST00000314045 LCE2BO14633 110 aa5.12□□□□□ -1.59
DDX54-202ENST00000314045 MUC2Q02817 5179 aa5.08□□□□□ -1.6
DDX54-202ENST00000314045 LCE2AQ5TA79 106 aaPredicted RBP5.04□□□□□ -1.6
DDX54-202ENST00000314045 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
DDX54-202ENST00000314045 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
DDX54-202ENST00000314045 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
DDX54-202ENST00000314045 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
DDX54-202ENST00000314045 INE1O15225 51 aa4.99□□□□□ -1.61
DDX54-202ENST00000314045 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
DDX54-202ENST00000314045 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
DDX54-202ENST00000314045 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
DDX54-202ENST00000314045 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
DDX54-202ENST00000314045 SPRR2EP22531 72 aa4.8□□□□□ -1.64
DDX54-202ENST00000314045 SPRR2BP35325 72 aa4.8□□□□□ -1.64
DDX54-202ENST00000314045 SPRR2AP35326 72 aa4.8□□□□□ -1.64
DDX54-202ENST00000314045 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
DDX54-202ENST00000314045 MT1GP13640 62 aa4.76□□□□□ -1.65
DDX54-202ENST00000314045 LCE2DQ5TA82 110 aaPredicted RBP4.73□□□□□ -1.65
DDX54-202ENST00000314045 MT1EP04732 61 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms