RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 FAM236BA0A1B0GV22 79 aa6.54□□□□□ -1.36
PPP1CA-201ENST00000312989 H0Y9P7 68 aa6.53□□□□□ -1.36
PPP1CA-201ENST00000312989 KLKP1Q107X0 134 aa6.51□□□□□ -1.37
PPP1CA-201ENST00000312989 J3QR89 54 aa6.5□□□□□ -1.37
PPP1CA-201ENST00000312989 ATOX1O00244 68 aa6.49□□□□□ -1.37
PPP1CA-201ENST00000312989 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
PPP1CA-201ENST00000312989 Q5VV11 94 aa6.46□□□□□ -1.37
PPP1CA-201ENST00000312989 K7ERU9 68 aa6.43□□□□□ -1.38
PPP1CA-201ENST00000312989 KRTAP6-3Q3LI67 103 aa6.43□□□□□ -1.38
PPP1CA-201ENST00000312989 LINC00208Q96KT6 92 aa6.42□□□□□ -1.38
PPP1CA-201ENST00000312989 H0YAA0 97 aa6.41□□□□□ -1.38
PPP1CA-201ENST00000312989 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
PPP1CA-201ENST00000312989 NEBP20929 6669 aa6.39□□□□□ -1.39
PPP1CA-201ENST00000312989 A6NN06 94 aa6.39□□□□□ -1.39
PPP1CA-201ENST00000312989 A8MUN3 132 aa6.39□□□□□ -1.39
PPP1CA-201ENST00000312989 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
PPP1CA-201ENST00000312989 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
PPP1CA-201ENST00000312989 NDUFC1O43677 76 aa6.36□□□□□ -1.39
PPP1CA-201ENST00000312989 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
PPP1CA-201ENST00000312989 MP68P56378 58 aa6.33□□□□□ -1.4
PPP1CA-201ENST00000312989 H3BPC8 53 aa6.29□□□□□ -1.4
PPP1CA-201ENST00000312989 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
PPP1CA-201ENST00000312989 DMAC1Q96GE9 116 aa6.27□□□□□ -1.41
PPP1CA-201ENST00000312989 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
PPP1CA-201ENST00000312989 KMT2DO14686 5537 aa6.23□□□□□ -1.41
PPP1CA-201ENST00000312989 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
PPP1CA-201ENST00000312989 P0C880 135 aa6.22□□□□□ -1.41
PPP1CA-201ENST00000312989 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
PPP1CA-201ENST00000312989 SCGB1A1P11684 91 aa6.18□□□□□ -1.42
PPP1CA-201ENST00000312989 MT1XP80297 61 aa6.18□□□□□ -1.42
PPP1CA-201ENST00000312989 TRAV7A0A075B6U4 112 aa6.1□□□□□ -1.43
PPP1CA-201ENST00000312989 R4GN34 69 aa6.08□□□□□ -1.44
PPP1CA-201ENST00000312989 M0QZ58 72 aa6.06□□□□□ -1.44
PPP1CA-201ENST00000312989 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
PPP1CA-201ENST00000312989 SMIM20Q8N5G0 67 aa6.06□□□□□ -1.44
PPP1CA-201ENST00000312989 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
PPP1CA-201ENST00000312989 ACYP2P14621 99 aa6.02□□□□□ -1.45
PPP1CA-201ENST00000312989 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
PPP1CA-201ENST00000312989 KRTAP12-2P59991 146 aa6□□□□□ -1.45
PPP1CA-201ENST00000312989 SNURFQ9Y675 71 aa5.99□□□□□ -1.45
PPP1CA-201ENST00000312989 SERP2Q8N6R1 65 aa5.96□□□□□ -1.45
PPP1CA-201ENST00000312989 LINC01554Q52M75 96 aa5.94□□□□□ -1.46
PPP1CA-201ENST00000312989 SPANXA2-OT1Q8N9U9 137 aa5.93□□□□□ -1.46
PPP1CA-201ENST00000312989 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
PPP1CA-201ENST00000312989 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
PPP1CA-201ENST00000312989 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
PPP1CA-201ENST00000312989 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.47
PPP1CA-201ENST00000312989 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
PPP1CA-201ENST00000312989 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
PPP1CA-201ENST00000312989 SPTSSBQ8NFR3 76 aa5.89□□□□□ -1.47
PPP1CA-201ENST00000312989 COX7CP15954 63 aa5.88□□□□□ -1.47
PPP1CA-201ENST00000312989 CHKB-CPT1BH3BT56 60 aa5.87□□□□□ -1.47
PPP1CA-201ENST00000312989 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
PPP1CA-201ENST00000312989 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
PPP1CA-201ENST00000312989 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
PPP1CA-201ENST00000312989 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
PPP1CA-201ENST00000312989 SPRR2EP22531 72 aa5.81□□□□□ -1.48
PPP1CA-201ENST00000312989 SPRR2BP35325 72 aa5.81□□□□□ -1.48
PPP1CA-201ENST00000312989 SPRR2AP35326 72 aa5.81□□□□□ -1.48
PPP1CA-201ENST00000312989 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
PPP1CA-201ENST00000312989 COA5Q86WW8 74 aa5.75□□□□□ -1.49
PPP1CA-201ENST00000312989 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
PPP1CA-201ENST00000312989 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
PPP1CA-201ENST00000312989 H7BZZ5 65 aa5.72□□□□□ -1.49
PPP1CA-201ENST00000312989 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
PPP1CA-201ENST00000312989 SPRR2DP22532 72 aa5.62□□□□□ -1.51
PPP1CA-201ENST00000312989 PCP4P48539 62 aa5.57□□□□□ -1.52
PPP1CA-201ENST00000312989 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
PPP1CA-201ENST00000312989 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
PPP1CA-201ENST00000312989 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
PPP1CA-201ENST00000312989 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
PPP1CA-201ENST00000312989 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
PPP1CA-201ENST00000312989 A0A0D9SG42 100 aa5.54□□□□□ -1.52
PPP1CA-201ENST00000312989 A0A1B0GU33 70 aa5.53□□□□□ -1.52
PPP1CA-201ENST00000312989 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
PPP1CA-201ENST00000312989 TMEM258P61165 79 aa5.53□□□□□ -1.52
PPP1CA-201ENST00000312989 SERP1Q9Y6X1 66 aa5.53□□□□□ -1.52
PPP1CA-201ENST00000312989 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
PPP1CA-201ENST00000312989 SEC61GP60059 68 aa5.51□□□□□ -1.53
PPP1CA-201ENST00000312989 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
PPP1CA-201ENST00000312989 MT1EP04732 61 aa5.47□□□□□ -1.53
PPP1CA-201ENST00000312989 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
PPP1CA-201ENST00000312989 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
PPP1CA-201ENST00000312989 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
PPP1CA-201ENST00000312989 A0A1B0GU69 56 aa5.39□□□□□ -1.55
PPP1CA-201ENST00000312989 A8MU10 97 aa5.39□□□□□ -1.55
PPP1CA-201ENST00000312989 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
PPP1CA-201ENST00000312989 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
PPP1CA-201ENST00000312989 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
PPP1CA-201ENST00000312989 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
PPP1CA-201ENST00000312989 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
PPP1CA-201ENST00000312989 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
PPP1CA-201ENST00000312989 MT1GP13640 62 aa5.24□□□□□ -1.57
PPP1CA-201ENST00000312989 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
PPP1CA-201ENST00000312989 MT1LQ93083 61 aa5.22□□□□□ -1.57
PPP1CA-201ENST00000312989 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
PPP1CA-201ENST00000312989 MT1MQ8N339 61 aa5.19□□□□□ -1.58
PPP1CA-201ENST00000312989 Q1T7F1 81 aa5.17□□□□□ -1.58
PPP1CA-201ENST00000312989 V9GYY9 64 aa5.16□□□□□ -1.58
PPP1CA-201ENST00000312989 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms