RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
LRRFIP1-203ENST00000308482 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.22
LRRFIP1-203ENST00000308482 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
LRRFIP1-203ENST00000308482 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
LRRFIP1-203ENST00000308482 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
LRRFIP1-203ENST00000308482 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
LRRFIP1-203ENST00000308482 HSPG2P98160 4391 aa7.39□□□□□ -1.23
LRRFIP1-203ENST00000308482 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
LRRFIP1-203ENST00000308482 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
LRRFIP1-203ENST00000308482 FAT3Q8TDW7 4589 aa7.35□□□□□ -1.23
LRRFIP1-203ENST00000308482 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
LRRFIP1-203ENST00000308482 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
LRRFIP1-203ENST00000308482 S4R3F8 94 aa7.31□□□□□ -1.24
LRRFIP1-203ENST00000308482 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
LRRFIP1-203ENST00000308482 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
LRRFIP1-203ENST00000308482 TNXBP22105 4242 aa7.25□□□□□ -1.25
LRRFIP1-203ENST00000308482 XP32Q5T750 250 aa7.22□□□□□ -1.25
LRRFIP1-203ENST00000308482 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
LRRFIP1-203ENST00000308482 LPAP08519 4548 aa7.17□□□□□ -1.26
LRRFIP1-203ENST00000308482 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
LRRFIP1-203ENST00000308482 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
LRRFIP1-203ENST00000308482 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.27
LRRFIP1-203ENST00000308482 RYR2Q92736 4967 aa7.08□□□□□ -1.28
LRRFIP1-203ENST00000308482 Q5VSD8 79 aa7.03□□□□□ -1.28
LRRFIP1-203ENST00000308482 A0A0A0MQY5 61 aa7.03□□□□□ -1.28
LRRFIP1-203ENST00000308482 LRP2P98164 4655 aa7.02□□□□□ -1.29
LRRFIP1-203ENST00000308482 KRTAP17-1Q9BYP8 105 aa6.97□□□□□ -1.29
LRRFIP1-203ENST00000308482 M0QZ58 72 aa6.97□□□□□ -1.29
LRRFIP1-203ENST00000308482 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
LRRFIP1-203ENST00000308482 RYR1P21817 5038 aa6.86□□□□□ -1.31
LRRFIP1-203ENST00000308482 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.31
LRRFIP1-203ENST00000308482 R4GN34 69 aa6.83□□□□□ -1.32
LRRFIP1-203ENST00000308482 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
LRRFIP1-203ENST00000308482 RYR3Q15413 4870 aa6.78□□□□□ -1.32
LRRFIP1-203ENST00000308482 ABCA13Q86UQ4 5058 aa6.75□□□□□ -1.33
LRRFIP1-203ENST00000308482 PLAC4Q8WY50 150 aa6.73□□□□□ -1.33
LRRFIP1-203ENST00000308482 MUC17Q685J3 4493 aa6.61□□□□□ -1.35
LRRFIP1-203ENST00000308482 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
LRRFIP1-203ENST00000308482 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
LRRFIP1-203ENST00000308482 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
LRRFIP1-203ENST00000308482 BIRC6Q9NR09 4857 aa6.51□□□□□ -1.37
LRRFIP1-203ENST00000308482 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
LRRFIP1-203ENST00000308482 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
LRRFIP1-203ENST00000308482 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
LRRFIP1-203ENST00000308482 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
LRRFIP1-203ENST00000308482 MUC2Q02817 5179 aa6.44□□□□□ -1.38
LRRFIP1-203ENST00000308482 KRTAP19-2Q3LHN2 52 aa6.43□□□□□ -1.38
LRRFIP1-203ENST00000308482 J3QL48 77 aa6.37□□□□□ -1.39
LRRFIP1-203ENST00000308482 HERC2O95714 4834 aa6.34□□□□□ -1.39
LRRFIP1-203ENST00000308482 TNP1P09430 55 aa6.26□□□□□ -1.41
LRRFIP1-203ENST00000308482 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
LRRFIP1-203ENST00000308482 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
LRRFIP1-203ENST00000308482 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
LRRFIP1-203ENST00000308482 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
LRRFIP1-203ENST00000308482 FAT4Q6V0I7 4981 aa6.1□□□□□ -1.43
LRRFIP1-203ENST00000308482 HERC1Q15751 4861 aa6.08□□□□□ -1.44
LRRFIP1-203ENST00000308482 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
LRRFIP1-203ENST00000308482 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
LRRFIP1-203ENST00000308482 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
LRRFIP1-203ENST00000308482 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
LRRFIP1-203ENST00000308482 M0R2T5 61 aa5.84□□□□□ -1.47
LRRFIP1-203ENST00000308482 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
LRRFIP1-203ENST00000308482 RNF213Q63HN8 5207 aa5.79□□□□□ -1.48
LRRFIP1-203ENST00000308482 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
LRRFIP1-203ENST00000308482 MT1FP04733 61 aa5.78□□□□□ -1.48
LRRFIP1-203ENST00000308482 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
LRRFIP1-203ENST00000308482 MT1HP80294 61 aa5.74□□□□□ -1.49
LRRFIP1-203ENST00000308482 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
LRRFIP1-203ENST00000308482 MT2AP02795 61 aa5.73□□□□□ -1.49
LRRFIP1-203ENST00000308482 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
LRRFIP1-203ENST00000308482 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
LRRFIP1-203ENST00000308482 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
LRRFIP1-203ENST00000308482 MT1XP80297 61 aa5.65□□□□□ -1.5
LRRFIP1-203ENST00000308482 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
LRRFIP1-203ENST00000308482 MT1BP07438 61 aa5.62□□□□□ -1.51
LRRFIP1-203ENST00000308482 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
LRRFIP1-203ENST00000308482 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
LRRFIP1-203ENST00000308482 INE1O15225 51 aa5.58□□□□□ -1.52
LRRFIP1-203ENST00000308482 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
LRRFIP1-203ENST00000308482 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
LRRFIP1-203ENST00000308482 KMT2DO14686 5537 aa5.38□□□□□ -1.55
LRRFIP1-203ENST00000308482 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
LRRFIP1-203ENST00000308482 USH2AO75445 5202 aa5.32□□□□□ -1.56
LRRFIP1-203ENST00000308482 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
LRRFIP1-203ENST00000308482 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
LRRFIP1-203ENST00000308482 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
LRRFIP1-203ENST00000308482 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
LRRFIP1-203ENST00000308482 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.58
LRRFIP1-203ENST00000308482 LCE2BO14633 110 aa5.19□□□□□ -1.58
LRRFIP1-203ENST00000308482 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
LRRFIP1-203ENST00000308482 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
LRRFIP1-203ENST00000308482 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
LRRFIP1-203ENST00000308482 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
LRRFIP1-203ENST00000308482 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
LRRFIP1-203ENST00000308482 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
LRRFIP1-203ENST00000308482 MT1LQ93083 61 aa4.89□□□□□ -1.63
LRRFIP1-203ENST00000308482 MT1EP04732 61 aa4.84□□□□□ -1.63
LRRFIP1-203ENST00000308482 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
LRRFIP1-203ENST00000308482 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
LRRFIP1-203ENST00000308482 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms