RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
NKRF-201ENST00000304449 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
NKRF-201ENST00000304449 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
NKRF-201ENST00000304449 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
NKRF-201ENST00000304449 FAT1Q14517 4588 aa4.28□□□□□ -1.72
NKRF-201ENST00000304449 COX6B2Q6YFQ2 88 aa4.26□□□□□ -1.73
NKRF-201ENST00000304449 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
NKRF-201ENST00000304449 TNXBP22105 4242 aa4.25□□□□□ -1.73
NKRF-201ENST00000304449 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
NKRF-201ENST00000304449 HSPG2P98160 4391 aa4.22□□□□□ -1.73
NKRF-201ENST00000304449 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
NKRF-201ENST00000304449 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
NKRF-201ENST00000304449 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
NKRF-201ENST00000304449 RYR2Q92736 4967 aa4.19□□□□□ -1.74
NKRF-201ENST00000304449 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
NKRF-201ENST00000304449 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
NKRF-201ENST00000304449 SMR3BP02814 79 aaPredicted RBP4.15□□□□□ -1.74
NKRF-201ENST00000304449 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.75
NKRF-201ENST00000304449 KMT2CQ8NEZ4 4911 aaKnown RBP4.13□□□□□ -1.75
NKRF-201ENST00000304449 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
NKRF-201ENST00000304449 KRTAP21-3Q3LHN1 58 aa4.09□□□□□ -1.75
NKRF-201ENST00000304449 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
NKRF-201ENST00000304449 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
NKRF-201ENST00000304449 S4R3F8 94 aa4.06□□□□□ -1.76
NKRF-201ENST00000304449 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
NKRF-201ENST00000304449 KRTAP10-8P60410 259 aa4.05□□□□□ -1.76
NKRF-201ENST00000304449 LPAP08519 4548 aa4.05□□□□□ -1.76
NKRF-201ENST00000304449 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
NKRF-201ENST00000304449 KRTAP17-1Q9BYP8 105 aa4.01□□□□□ -1.77
NKRF-201ENST00000304449 RYR1P21817 5038 aa4□□□□□ -1.77
NKRF-201ENST00000304449 RYR3Q15413 4870 aa4□□□□□ -1.77
NKRF-201ENST00000304449 XP32Q5T750 250 aa3.97□□□□□ -1.77
NKRF-201ENST00000304449 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
NKRF-201ENST00000304449 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
NKRF-201ENST00000304449 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
NKRF-201ENST00000304449 SEC61BP60468 96 aaKnown RBP3.92□□□□□ -1.78
NKRF-201ENST00000304449 MT1HL1P0DM35 61 aa3.92□□□□□ -1.78
NKRF-201ENST00000304449 LRP2P98164 4655 aa3.91□□□□□ -1.78
NKRF-201ENST00000304449 Q5VSD8 79 aa3.9□□□□□ -1.79
NKRF-201ENST00000304449 ABCA13Q86UQ4 5058 aa3.87□□□□□ -1.79
NKRF-201ENST00000304449 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
NKRF-201ENST00000304449 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
NKRF-201ENST00000304449 MUC17Q685J3 4493 aa3.85□□□□□ -1.79
NKRF-201ENST00000304449 M0QZ58 72 aa3.85□□□□□ -1.79
NKRF-201ENST00000304449 EPPK1P58107 5090 aaKnown RBP3.82□□□□□ -1.8
NKRF-201ENST00000304449 R4GN34 69 aa3.81□□□□□ -1.8
NKRF-201ENST00000304449 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.81
NKRF-201ENST00000304449 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
NKRF-201ENST00000304449 KRTAP4-1Q9BYQ7 146 aa3.68□□□□□ -1.82
NKRF-201ENST00000304449 KRTAP4-5Q9BYR2 181 aa3.68□□□□□ -1.82
NKRF-201ENST00000304449 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
NKRF-201ENST00000304449 MUC2Q02817 5179 aa3.58□□□□□ -1.84
NKRF-201ENST00000304449 BIRC6Q9NR09 4857 aa3.56□□□□□ -1.84
NKRF-201ENST00000304449 HERC2O95714 4834 aa3.56□□□□□ -1.84
NKRF-201ENST00000304449 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
NKRF-201ENST00000304449 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
NKRF-201ENST00000304449 HERC1Q15751 4861 aa3.54□□□□□ -1.84
NKRF-201ENST00000304449 TNP1P09430 55 aa3.48□□□□□ -1.85
NKRF-201ENST00000304449 HMCN2Q8NDA2 5059 aa3.45□□□□□ -1.86
NKRF-201ENST00000304449 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
NKRF-201ENST00000304449 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
NKRF-201ENST00000304449 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
NKRF-201ENST00000304449 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
NKRF-201ENST00000304449 PRO2289Q9P1D8 64 aa3.34□□□□□ -1.87
NKRF-201ENST00000304449 UBR4Q5T4S7 5183 aa3.3□□□□□ -1.88
NKRF-201ENST00000304449 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
NKRF-201ENST00000304449 MT1HP80294 61 aa3.26□□□□□ -1.89
NKRF-201ENST00000304449 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
NKRF-201ENST00000304449 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
NKRF-201ENST00000304449 MT1FP04733 61 aa3.23□□□□□ -1.89
NKRF-201ENST00000304449 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
NKRF-201ENST00000304449 MT2AP02795 61 aa3.22□□□□□ -1.89
NKRF-201ENST00000304449 M0R2T5 61 aa3.21□□□□□ -1.9
NKRF-201ENST00000304449 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
NKRF-201ENST00000304449 INE1O15225 51 aa3.2□□□□□ -1.9
NKRF-201ENST00000304449 MT1BP07438 61 aa3.16□□□□□ -1.9
NKRF-201ENST00000304449 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
NKRF-201ENST00000304449 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.9
NKRF-201ENST00000304449 MT1XP80297 61 aa3.15□□□□□ -1.91
NKRF-201ENST00000304449 KRTAP10-10P60014 251 aa3.1□□□□□ -1.91
NKRF-201ENST00000304449 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
NKRF-201ENST00000304449 KRTAP9-3Q9BYQ3 159 aa3.09□□□□□ -1.91
NKRF-201ENST00000304449 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
NKRF-201ENST00000304449 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
NKRF-201ENST00000304449 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
NKRF-201ENST00000304449 KMT2DO14686 5537 aa3□□□□□ -1.93
NKRF-201ENST00000304449 KRTAP9-6A0A140TA67 174 aa2.98□□□□□ -1.93
NKRF-201ENST00000304449 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
NKRF-201ENST00000304449 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
NKRF-201ENST00000304449 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
NKRF-201ENST00000304449 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
NKRF-201ENST00000304449 USH2AO75445 5202 aa2.91□□□□□ -1.94
NKRF-201ENST00000304449 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.95
NKRF-201ENST00000304449 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
NKRF-201ENST00000304449 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
NKRF-201ENST00000304449 KRTAP4-7Q9BYR0 210 aa2.85□□□□□ -1.95
NKRF-201ENST00000304449 KRTAP4-8A0A0G2JLE6 195 aa2.83□□□□□ -1.96
NKRF-201ENST00000304449 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
NKRF-201ENST00000304449 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
NKRF-201ENST00000304449 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms