RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ATOX1O00244 68 aa7.38□□□□□ -1.23
TRAPPC1-201ENST00000303731 KRTAP10-5P60370 271 aa7.37□□□□□ -1.23
TRAPPC1-201ENST00000303731 IMUPQ9GZP8 106 aa7.37□□□□□ -1.23
TRAPPC1-201ENST00000303731 UQCRQO14949 82 aa7.36□□□□□ -1.23
TRAPPC1-201ENST00000303731 PCP4L1A6NKN8 68 aa7.34□□□□□ -1.23
TRAPPC1-201ENST00000303731 NDUFC1O43677 76 aa7.33□□□□□ -1.24
TRAPPC1-201ENST00000303731 HIST1H4AP62805 103 aaKnown RBP7.33□□□□□ -1.24
TRAPPC1-201ENST00000303731 A0A087WVE0 104 aa7.31□□□□□ -1.24
TRAPPC1-201ENST00000303731 H0Y9P7 68 aa7.31□□□□□ -1.24
TRAPPC1-201ENST00000303731 H0YAA0 97 aa7.31□□□□□ -1.24
TRAPPC1-201ENST00000303731 A8MUN3 132 aa7.3□□□□□ -1.24
TRAPPC1-201ENST00000303731 NEBP20929 6669 aa7.28□□□□□ -1.24
TRAPPC1-201ENST00000303731 MUC12Q9UKN1 5478 aa7.25□□□□□ -1.25
TRAPPC1-201ENST00000303731 LINC00643Q86TS7 51 aa7.22□□□□□ -1.25
TRAPPC1-201ENST00000303731 KRTAP5-9P26371 169 aa7.2□□□□□ -1.26
TRAPPC1-201ENST00000303731 LINC00208Q96KT6 92 aa7.18□□□□□ -1.26
TRAPPC1-201ENST00000303731 MP68P56378 58 aa7.17□□□□□ -1.26
TRAPPC1-201ENST00000303731 ADM2Q7Z4H4 148 aa7.16□□□□□ -1.26
TRAPPC1-201ENST00000303731 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
TRAPPC1-201ENST00000303731 OCR1Q9BZK8 76 aa7.12□□□□□ -1.27
TRAPPC1-201ENST00000303731 KMT2DO14686 5537 aa7.08□□□□□ -1.28
TRAPPC1-201ENST00000303731 H3BPC8 53 aa7.08□□□□□ -1.28
TRAPPC1-201ENST00000303731 C20orf197Q8N268 126 aa7.08□□□□□ -1.28
TRAPPC1-201ENST00000303731 KRTAP20-1Q3LI63 56 aa7.07□□□□□ -1.28
TRAPPC1-201ENST00000303731 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
TRAPPC1-201ENST00000303731 R4GN34 69 aa7.05□□□□□ -1.28
TRAPPC1-201ENST00000303731 MDN1Q9NU22 5596 aa7.02□□□□□ -1.29
TRAPPC1-201ENST00000303731 DMAC1Q96GE9 116 aa7□□□□□ -1.29
TRAPPC1-201ENST00000303731 MT1XP80297 61 aa6.99□□□□□ -1.29
TRAPPC1-201ENST00000303731 J3QR89 54 aa6.98□□□□□ -1.29
TRAPPC1-201ENST00000303731 M0QZ58 72 aa6.95□□□□□ -1.3
TRAPPC1-201ENST00000303731 P0C880 135 aa6.95□□□□□ -1.3
TRAPPC1-201ENST00000303731 SCGB1A1P11684 91 aa6.95□□□□□ -1.3
TRAPPC1-201ENST00000303731 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
TRAPPC1-201ENST00000303731 A0A1B0GV90 55 aa6.92□□□□□ -1.3
TRAPPC1-201ENST00000303731 KRTAP12-2P59991 146 aa6.91□□□□□ -1.3
TRAPPC1-201ENST00000303731 TRAV7A0A075B6U4 112 aa6.88□□□□□ -1.31
TRAPPC1-201ENST00000303731 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
TRAPPC1-201ENST00000303731 KRTAP2-3P0C7H8 128 aa6.87□□□□□ -1.31
TRAPPC1-201ENST00000303731 KRTAP2-4Q9BYR9 128 aa6.87□□□□□ -1.31
TRAPPC1-201ENST00000303731 SPRR2EP22531 72 aa6.85□□□□□ -1.31
TRAPPC1-201ENST00000303731 SPRR2BP35325 72 aa6.85□□□□□ -1.31
TRAPPC1-201ENST00000303731 SPRR2AP35326 72 aa6.85□□□□□ -1.31
TRAPPC1-201ENST00000303731 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
TRAPPC1-201ENST00000303731 ACYP2P14621 99 aa6.82□□□□□ -1.32
TRAPPC1-201ENST00000303731 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
TRAPPC1-201ENST00000303731 SMIM20Q8N5G0 67 aa6.77□□□□□ -1.33
TRAPPC1-201ENST00000303731 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
TRAPPC1-201ENST00000303731 MT-ATP8P03928 68 aa6.73□□□□□ -1.33
TRAPPC1-201ENST00000303731 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
TRAPPC1-201ENST00000303731 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
TRAPPC1-201ENST00000303731 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
TRAPPC1-201ENST00000303731 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
TRAPPC1-201ENST00000303731 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC1-201ENST00000303731 KRTAP2-2Q9BYT5 123 aa6.65□□□□□ -1.34
TRAPPC1-201ENST00000303731 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.34
TRAPPC1-201ENST00000303731 SPRR2DP22532 72 aa6.64□□□□□ -1.35
TRAPPC1-201ENST00000303731 K7ERU9 68 aa6.62□□□□□ -1.35
TRAPPC1-201ENST00000303731 SPANXA2-OT1Q8N9U9 137 aa6.57□□□□□ -1.36
TRAPPC1-201ENST00000303731 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
TRAPPC1-201ENST00000303731 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
TRAPPC1-201ENST00000303731 SNURFQ9Y675 71 aa6.55□□□□□ -1.36
TRAPPC1-201ENST00000303731 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
TRAPPC1-201ENST00000303731 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
TRAPPC1-201ENST00000303731 SERP2Q8N6R1 65 aa6.44□□□□□ -1.38
TRAPPC1-201ENST00000303731 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
TRAPPC1-201ENST00000303731 SEC61GP60059 68 aa6.36□□□□□ -1.39
TRAPPC1-201ENST00000303731 COA5Q86WW8 74 aa6.34□□□□□ -1.39
TRAPPC1-201ENST00000303731 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
TRAPPC1-201ENST00000303731 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
TRAPPC1-201ENST00000303731 A0A0D9SG42 100 aa6.24□□□□□ -1.41
TRAPPC1-201ENST00000303731 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
TRAPPC1-201ENST00000303731 MT1EP04732 61 aa6.22□□□□□ -1.41
TRAPPC1-201ENST00000303731 A0A1B0GU33 70 aa6.21□□□□□ -1.42
TRAPPC1-201ENST00000303731 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
TRAPPC1-201ENST00000303731 COX7CP15954 63 aa6.19□□□□□ -1.42
TRAPPC1-201ENST00000303731 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
TRAPPC1-201ENST00000303731 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
TRAPPC1-201ENST00000303731 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.43
TRAPPC1-201ENST00000303731 H7BZZ5 65 aa6.12□□□□□ -1.43
TRAPPC1-201ENST00000303731 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
TRAPPC1-201ENST00000303731 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
TRAPPC1-201ENST00000303731 MT1GP13640 62 aa6.07□□□□□ -1.44
TRAPPC1-201ENST00000303731 CYSTM1Q9H1C7 97 aa6.07□□□□□ -1.44
TRAPPC1-201ENST00000303731 A0A1B0GU69 56 aa6.06□□□□□ -1.44
TRAPPC1-201ENST00000303731 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
TRAPPC1-201ENST00000303731 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
TRAPPC1-201ENST00000303731 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
TRAPPC1-201ENST00000303731 GPR98Q8WXG9 6306 aa5.95□□□□□ -1.46
TRAPPC1-201ENST00000303731 H3BS24 57 aa5.94□□□□□ -1.46
TRAPPC1-201ENST00000303731 TNP1P09430 55 aa5.93□□□□□ -1.46
TRAPPC1-201ENST00000303731 A8MU10 97 aa5.92□□□□□ -1.46
TRAPPC1-201ENST00000303731 MT1MQ8N339 61 aa5.92□□□□□ -1.46
TRAPPC1-201ENST00000303731 MT1LQ93083 61 aa5.92□□□□□ -1.46
TRAPPC1-201ENST00000303731 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
TRAPPC1-201ENST00000303731 KRTAP4-12Q9BQ66 201 aa5.89□□□□□ -1.47
TRAPPC1-201ENST00000303731 ANAPC13Q9BS18 74 aa5.89□□□□□ -1.47
TRAPPC1-201ENST00000303731 PRR15LQ9BU68 103 aa5.89□□□□□ -1.47
TRAPPC1-201ENST00000303731 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
TRAPPC1-201ENST00000303731 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms