RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
CACNB3-201ENST00000301050 HSPG2P98160 4391 aa8.39□□□□□ -1.07
CACNB3-201ENST00000301050 Q5VSD8 79 aa8.36□□□□□ -1.07
CACNB3-201ENST00000301050 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
CACNB3-201ENST00000301050 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
CACNB3-201ENST00000301050 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
CACNB3-201ENST00000301050 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
CACNB3-201ENST00000301050 C20orf166-AS1Q96NR2 134 aa8.32□□□□□ -1.08
CACNB3-201ENST00000301050 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
CACNB3-201ENST00000301050 C10orf95Q9H7T3 257 aa8.31□□□□□ -1.08
CACNB3-201ENST00000301050 LRP1Q07954 4544 aaKnown RBP8.31□□□□□ -1.08
CACNB3-201ENST00000301050 RYR1P21817 5038 aa8.29□□□□□ -1.08
CACNB3-201ENST00000301050 TNXBP22105 4242 aa8.28□□□□□ -1.08
CACNB3-201ENST00000301050 KRTAP13-4Q3LI77 160 aa8.28□□□□□ -1.08
CACNB3-201ENST00000301050 A0A0D9SG42 100 aa8.27□□□□□ -1.08
CACNB3-201ENST00000301050 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
CACNB3-201ENST00000301050 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
CACNB3-201ENST00000301050 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
CACNB3-201ENST00000301050 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
CACNB3-201ENST00000301050 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
CACNB3-201ENST00000301050 EPPK1P58107 5090 aaKnown RBP8.18□□□□□ -1.1
CACNB3-201ENST00000301050 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
CACNB3-201ENST00000301050 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
CACNB3-201ENST00000301050 MYCBP2O75592 4640 aa8.1□□□□□ -1.11
CACNB3-201ENST00000301050 S4R3F8 94 aa8.09□□□□□ -1.11
CACNB3-201ENST00000301050 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
CACNB3-201ENST00000301050 KRTAP12-2P59991 146 aa8.05□□□□□ -1.12
CACNB3-201ENST00000301050 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
CACNB3-201ENST00000301050 A0A0A0MQY5 61 aa7.96□□□□□ -1.14
CACNB3-201ENST00000301050 XP32Q5T750 250 aa7.96□□□□□ -1.14
CACNB3-201ENST00000301050 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
CACNB3-201ENST00000301050 ABCA13Q86UQ4 5058 aa7.8□□□□□ -1.16
CACNB3-201ENST00000301050 LPAP08519 4548 aa7.77□□□□□ -1.17
CACNB3-201ENST00000301050 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
CACNB3-201ENST00000301050 LRP2P98164 4655 aa7.73□□□□□ -1.17
CACNB3-201ENST00000301050 M0QZ58 72 aa7.68□□□□□ -1.18
CACNB3-201ENST00000301050 J3QL48 77 aa7.68□□□□□ -1.18
CACNB3-201ENST00000301050 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
CACNB3-201ENST00000301050 HERC2O95714 4834 aa7.66□□□□□ -1.18
CACNB3-201ENST00000301050 BIRC6Q9NR09 4857 aa7.65□□□□□ -1.19
CACNB3-201ENST00000301050 SEC61BP60468 96 aaKnown RBP7.48□□□□□ -1.21
CACNB3-201ENST00000301050 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
CACNB3-201ENST00000301050 MUC17Q685J3 4493 aa7.44□□□□□ -1.22
CACNB3-201ENST00000301050 R4GN34 69 aa7.4□□□□□ -1.22
CACNB3-201ENST00000301050 PCLOQ9Y6V0 5065 aa7.36□□□□□ -1.23
CACNB3-201ENST00000301050 HERC1Q15751 4861 aa7.31□□□□□ -1.24
CACNB3-201ENST00000301050 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
CACNB3-201ENST00000301050 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
CACNB3-201ENST00000301050 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
CACNB3-201ENST00000301050 HMCN2Q8NDA2 5059 aa7.23□□□□□ -1.25
CACNB3-201ENST00000301050 MUC2Q02817 5179 aa7.21□□□□□ -1.25
CACNB3-201ENST00000301050 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
CACNB3-201ENST00000301050 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
CACNB3-201ENST00000301050 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
CACNB3-201ENST00000301050 LCE2CQ5TA81 110 aa6.94□□□□□ -1.3
CACNB3-201ENST00000301050 UBR4Q5T4S7 5183 aa6.92□□□□□ -1.3
CACNB3-201ENST00000301050 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
CACNB3-201ENST00000301050 TNP1P09430 55 aa6.9□□□□□ -1.31
CACNB3-201ENST00000301050 FAT4Q6V0I7 4981 aa6.89□□□□□ -1.31
CACNB3-201ENST00000301050 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
CACNB3-201ENST00000301050 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
CACNB3-201ENST00000301050 M0R2T5 61 aa6.78□□□□□ -1.32
CACNB3-201ENST00000301050 MT1HP80294 61 aa6.78□□□□□ -1.32
CACNB3-201ENST00000301050 INE1O15225 51 aa6.63□□□□□ -1.35
CACNB3-201ENST00000301050 MT2AP02795 61 aa6.6□□□□□ -1.35
CACNB3-201ENST00000301050 MT1FP04733 61 aa6.59□□□□□ -1.35
CACNB3-201ENST00000301050 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
CACNB3-201ENST00000301050 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
CACNB3-201ENST00000301050 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
CACNB3-201ENST00000301050 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
CACNB3-201ENST00000301050 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
CACNB3-201ENST00000301050 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
CACNB3-201ENST00000301050 KRTAP8-1Q8IUC2 63 aa6.31□□□□□ -1.4
CACNB3-201ENST00000301050 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
CACNB3-201ENST00000301050 MT1BP07438 61 aa6.29□□□□□ -1.4
CACNB3-201ENST00000301050 LCE2AQ5TA79 106 aaPredicted RBP6.23□□□□□ -1.41
CACNB3-201ENST00000301050 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
CACNB3-201ENST00000301050 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
CACNB3-201ENST00000301050 MT1XP80297 61 aa6.16□□□□□ -1.42
CACNB3-201ENST00000301050 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
CACNB3-201ENST00000301050 LCE2BO14633 110 aa6.12□□□□□ -1.43
CACNB3-201ENST00000301050 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
CACNB3-201ENST00000301050 USH2AO75445 5202 aa5.98□□□□□ -1.45
CACNB3-201ENST00000301050 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
CACNB3-201ENST00000301050 KMT2DO14686 5537 aa5.72□□□□□ -1.49
CACNB3-201ENST00000301050 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
CACNB3-201ENST00000301050 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
CACNB3-201ENST00000301050 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
CACNB3-201ENST00000301050 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
CACNB3-201ENST00000301050 SSPOA2VEC9 5147 aa5.69□□□□□ -1.5
CACNB3-201ENST00000301050 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
CACNB3-201ENST00000301050 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
CACNB3-201ENST00000301050 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
CACNB3-201ENST00000301050 FSIP2Q5CZC0 6907 aa5.61□□□□□ -1.51
CACNB3-201ENST00000301050 KRTAP19-6Q3LI70 58 aa5.58□□□□□ -1.52
CACNB3-201ENST00000301050 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
CACNB3-201ENST00000301050 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
CACNB3-201ENST00000301050 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
CACNB3-201ENST00000301050 MT1EP04732 61 aa5.36□□□□□ -1.55
CACNB3-201ENST00000301050 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms