RNA–Protein interactions for RNA: ENST00000297273.8

CASD1-201, Transcript of CAS1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASD1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-201ENST00000297273 DYNC2H1Q8NCM8 4307 aaKnown RBP9.42□□□□□ -0.9
CASD1-201ENST00000297273 HYDINQ4G0P3 5121 aa9.41□□□□□ -0.9
CASD1-201ENST00000297273 KRTAP13-4Q3LI77 160 aa9.38□□□□□ -0.91
CASD1-201ENST00000297273 DYNC1H1Q14204 4646 aaKnown RBP9.37□□□□□ -0.91
CASD1-201ENST00000297273 NDUFAF8A1L188 74 aa9.37□□□□□ -0.91
CASD1-201ENST00000297273 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
CASD1-201ENST00000297273 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
CASD1-201ENST00000297273 LRP1Q07954 4544 aaKnown RBP9.31□□□□□ -0.92
CASD1-201ENST00000297273 SEC61BP60468 96 aaKnown RBP9.31□□□□□ -0.92
CASD1-201ENST00000297273 M0R2T5 61 aa9.29□□□□□ -0.92
CASD1-201ENST00000297273 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
CASD1-201ENST00000297273 KRTAP10-6P60371 365 aaPredicted RBP9.24□□□□□ -0.93
CASD1-201ENST00000297273 KRTAP10-4P60372 401 aaPredicted RBP9.21□□□□□ -0.93
CASD1-201ENST00000297273 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
CASD1-201ENST00000297273 SACSQ9NZJ4 4579 aa9.16□□□□□ -0.94
CASD1-201ENST00000297273 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
CASD1-201ENST00000297273 ALMS1Q8TCU4 4167 aa9.13□□□□□ -0.95
CASD1-201ENST00000297273 KRTAP21-3Q3LHN1 58 aa9.13□□□□□ -0.95
CASD1-201ENST00000297273 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
CASD1-201ENST00000297273 RYR1P21817 5038 aa9.12□□□□□ -0.95
CASD1-201ENST00000297273 LUZP6Q538Z0 58 aa9.11□□□□□ -0.95
CASD1-201ENST00000297273 APOBP04114 4563 aaKnown RBP9.09□□□□□ -0.95
CASD1-201ENST00000297273 FAT2Q9NYQ8 4349 aa9.06□□□□□ -0.96
CASD1-201ENST00000297273 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
CASD1-201ENST00000297273 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
CASD1-201ENST00000297273 KRTAP4-5Q9BYR2 181 aa8.99□□□□□ -0.97
CASD1-201ENST00000297273 MT1HL1P0DM35 61 aa8.97□□□□□ -0.97
CASD1-201ENST00000297273 PKD1P98161 4303 aa8.97□□□□□ -0.97
CASD1-201ENST00000297273 KMT2CQ8NEZ4 4911 aaKnown RBP8.94□□□□□ -0.98
CASD1-201ENST00000297273 RYR3Q15413 4870 aa8.92□□□□□ -0.98
CASD1-201ENST00000297273 LRP2P98164 4655 aa8.87□□□□□ -0.99
CASD1-201ENST00000297273 PLAC4Q8WY50 150 aa8.8□□□□□ -1
CASD1-201ENST00000297273 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
CASD1-201ENST00000297273 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
CASD1-201ENST00000297273 A0A0A0MQY5 61 aa8.71□□□□□ -1.01
CASD1-201ENST00000297273 HSPG2P98160 4391 aa8.71□□□□□ -1.01
CASD1-201ENST00000297273 RYR2Q92736 4967 aa8.65□□□□□ -1.03
CASD1-201ENST00000297273 TNP1P09430 55 aa8.65□□□□□ -1.03
CASD1-201ENST00000297273 LPAP08519 4548 aa8.6□□□□□ -1.03
CASD1-201ENST00000297273 KRTAP10-10P60014 251 aa8.48□□□□□ -1.05
CASD1-201ENST00000297273 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
CASD1-201ENST00000297273 EPPK1P58107 5090 aaKnown RBP8.46□□□□□ -1.06
CASD1-201ENST00000297273 KRTAP15-1Q3LI76 137 aa8.45□□□□□ -1.06
CASD1-201ENST00000297273 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
CASD1-201ENST00000297273 MUC2Q02817 5179 aa8.35□□□□□ -1.07
CASD1-201ENST00000297273 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
CASD1-201ENST00000297273 HERC2O95714 4834 aa8.31□□□□□ -1.08
CASD1-201ENST00000297273 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
CASD1-201ENST00000297273 TNXBP22105 4242 aa8.24□□□□□ -1.09
CASD1-201ENST00000297273 RNF213Q63HN8 5207 aa7.99□□□□□ -1.13
CASD1-201ENST00000297273 FAT4Q6V0I7 4981 aa7.99□□□□□ -1.13
CASD1-201ENST00000297273 HERC1Q15751 4861 aa7.92□□□□□ -1.14
CASD1-201ENST00000297273 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
CASD1-201ENST00000297273 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
CASD1-201ENST00000297273 UBR4Q5T4S7 5183 aa7.65□□□□□ -1.18
CASD1-201ENST00000297273 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
CASD1-201ENST00000297273 MT1HP80294 61 aa7.59□□□□□ -1.19
CASD1-201ENST00000297273 MT1FP04733 61 aa7.58□□□□□ -1.2
CASD1-201ENST00000297273 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
CASD1-201ENST00000297273 FSIP2Q5CZC0 6907 aa7.57□□□□□ -1.2
CASD1-201ENST00000297273 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
CASD1-201ENST00000297273 MT2AP02795 61 aa7.55□□□□□ -1.2
CASD1-201ENST00000297273 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
CASD1-201ENST00000297273 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
CASD1-201ENST00000297273 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
CASD1-201ENST00000297273 KRTAP19-2Q3LHN2 52 aa7.47□□□□□ -1.21
CASD1-201ENST00000297273 BIRC6Q9NR09 4857 aa7.46□□□□□ -1.22
CASD1-201ENST00000297273 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
CASD1-201ENST00000297273 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
CASD1-201ENST00000297273 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
CASD1-201ENST00000297273 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
CASD1-201ENST00000297273 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
CASD1-201ENST00000297273 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
CASD1-201ENST00000297273 USH2AO75445 5202 aa7.21□□□□□ -1.26
CASD1-201ENST00000297273 KRTAP9-8Q9BYQ0 159 aa7.17□□□□□ -1.26
CASD1-201ENST00000297273 OBSCNQ5VST9 7968 aa7.15□□□□□ -1.26
CASD1-201ENST00000297273 MT1XP80297 61 aa7.1□□□□□ -1.27
CASD1-201ENST00000297273 MT1BP07438 61 aa7.09□□□□□ -1.27
CASD1-201ENST00000297273 KMT2DO14686 5537 aa7.08□□□□□ -1.28
CASD1-201ENST00000297273 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
CASD1-201ENST00000297273 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
CASD1-201ENST00000297273 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
CASD1-201ENST00000297273 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
CASD1-201ENST00000297273 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
CASD1-201ENST00000297273 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
CASD1-201ENST00000297273 SYNE1Q8NF91 8797 aaKnown RBP6.9□□□□□ -1.3
CASD1-201ENST00000297273 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
CASD1-201ENST00000297273 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
CASD1-201ENST00000297273 INE1O15225 51 aa6.87□□□□□ -1.31
CASD1-201ENST00000297273 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
CASD1-201ENST00000297273 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
CASD1-201ENST00000297273 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
CASD1-201ENST00000297273 LCE2BO14633 110 aa6.76□□□□□ -1.33
CASD1-201ENST00000297273 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
CASD1-201ENST00000297273 MT1GP13640 62 aa6.41□□□□□ -1.38
CASD1-201ENST00000297273 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
CASD1-201ENST00000297273 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
CASD1-201ENST00000297273 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
CASD1-201ENST00000297273 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
CASD1-201ENST00000297273 KRTAP9-6A8MVA2 160 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms