RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 K7ERS5 55 aa5.36□□□□□ -1.55
CCDC36-201ENST00000296449 KRTAP10-4P60372 401 aaPredicted RBP5.35□□□□□ -1.55
CCDC36-201ENST00000296449 KRTAP3-3Q9BYR6 98 aa5.34□□□□□ -1.55
CCDC36-201ENST00000296449 KRTAP3-2Q9BYR7 98 aa5.34□□□□□ -1.55
CCDC36-201ENST00000296449 FLG2Q5D862 2391 aaPredicted RBP5.34□□□□□ -1.55
CCDC36-201ENST00000296449 P0C880 135 aa5.33□□□□□ -1.56
CCDC36-201ENST00000296449 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
CCDC36-201ENST00000296449 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
CCDC36-201ENST00000296449 A0A1B0GVY2 172 aa5.26□□□□□ -1.57
CCDC36-201ENST00000296449 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
CCDC36-201ENST00000296449 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
CCDC36-201ENST00000296449 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
CCDC36-201ENST00000296449 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
CCDC36-201ENST00000296449 EPPK1P58107 5090 aaKnown RBP5.23□□□□□ -1.57
CCDC36-201ENST00000296449 DMBT1Q9UGM3 2413 aaPredicted RBP5.22□□□□□ -1.57
CCDC36-201ENST00000296449 A0A0D9SG42 100 aa5.21□□□□□ -1.58
CCDC36-201ENST00000296449 HSPG2P98160 4391 aa5.19□□□□□ -1.58
CCDC36-201ENST00000296449 TNXBP22105 4242 aa5.19□□□□□ -1.58
CCDC36-201ENST00000296449 KRTAP10-8P60410 259 aa5.18□□□□□ -1.58
CCDC36-201ENST00000296449 LRP1Q07954 4544 aaKnown RBP5.17□□□□□ -1.58
CCDC36-201ENST00000296449 S4R3F8 94 aa5.17□□□□□ -1.58
CCDC36-201ENST00000296449 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
CCDC36-201ENST00000296449 TPRXLQ17RH7 258 aa5.15□□□□□ -1.59
CCDC36-201ENST00000296449 KIAA1109Q2LD37 5005 aa5.14□□□□□ -1.59
CCDC36-201ENST00000296449 XP32Q5T750 250 aa5.13□□□□□ -1.59
CCDC36-201ENST00000296449 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
CCDC36-201ENST00000296449 SPINT4Q6UDR6 99 aa5.1□□□□□ -1.59
CCDC36-201ENST00000296449 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
CCDC36-201ENST00000296449 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
CCDC36-201ENST00000296449 HERC2O95714 4834 aa5.09□□□□□ -1.59
CCDC36-201ENST00000296449 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
CCDC36-201ENST00000296449 RYR1P21817 5038 aa5.05□□□□□ -1.6
CCDC36-201ENST00000296449 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
CCDC36-201ENST00000296449 Q5VSD8 79 aa5.03□□□□□ -1.6
CCDC36-201ENST00000296449 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
CCDC36-201ENST00000296449 M0QZ58 72 aa4.99□□□□□ -1.61
CCDC36-201ENST00000296449 LPAP08519 4548 aa4.99□□□□□ -1.61
CCDC36-201ENST00000296449 PCLOQ9Y6V0 5065 aa4.98□□□□□ -1.61
CCDC36-201ENST00000296449 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
CCDC36-201ENST00000296449 LRP2P98164 4655 aa4.92□□□□□ -1.62
CCDC36-201ENST00000296449 ABCA13Q86UQ4 5058 aa4.92□□□□□ -1.62
CCDC36-201ENST00000296449 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
CCDC36-201ENST00000296449 R4GN34 69 aa4.8□□□□□ -1.64
CCDC36-201ENST00000296449 HERC1Q15751 4861 aa4.75□□□□□ -1.65
CCDC36-201ENST00000296449 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
CCDC36-201ENST00000296449 LCE2BO14633 110 aa4.72□□□□□ -1.65
CCDC36-201ENST00000296449 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
CCDC36-201ENST00000296449 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
CCDC36-201ENST00000296449 KRTAP4-1Q9BYQ7 146 aa4.65□□□□□ -1.66
CCDC36-201ENST00000296449 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
CCDC36-201ENST00000296449 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
CCDC36-201ENST00000296449 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
CCDC36-201ENST00000296449 MUC2Q02817 5179 aa4.58□□□□□ -1.68
CCDC36-201ENST00000296449 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
CCDC36-201ENST00000296449 RNF213Q63HN8 5207 aa4.5□□□□□ -1.69
CCDC36-201ENST00000296449 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
CCDC36-201ENST00000296449 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
CCDC36-201ENST00000296449 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
CCDC36-201ENST00000296449 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
CCDC36-201ENST00000296449 TNP1P09430 55 aa4.44□□□□□ -1.7
CCDC36-201ENST00000296449 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
CCDC36-201ENST00000296449 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
CCDC36-201ENST00000296449 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
CCDC36-201ENST00000296449 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
CCDC36-201ENST00000296449 LCE2CQ5TA81 110 aa4.37□□□□□ -1.71
CCDC36-201ENST00000296449 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.71
CCDC36-201ENST00000296449 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
CCDC36-201ENST00000296449 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
CCDC36-201ENST00000296449 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
CCDC36-201ENST00000296449 M0R2T5 61 aa4.13□□□□□ -1.75
CCDC36-201ENST00000296449 MT1HP80294 61 aa4.11□□□□□ -1.75
CCDC36-201ENST00000296449 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
CCDC36-201ENST00000296449 MT1FP04733 61 aa4.11□□□□□ -1.75
CCDC36-201ENST00000296449 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
CCDC36-201ENST00000296449 MT2AP02795 61 aa4.09□□□□□ -1.75
CCDC36-201ENST00000296449 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
CCDC36-201ENST00000296449 INE1O15225 51 aa4.07□□□□□ -1.76
CCDC36-201ENST00000296449 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
CCDC36-201ENST00000296449 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
CCDC36-201ENST00000296449 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
CCDC36-201ENST00000296449 MT1XP80297 61 aa4.01□□□□□ -1.77
CCDC36-201ENST00000296449 MT1BP07438 61 aa4.01□□□□□ -1.77
CCDC36-201ENST00000296449 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
CCDC36-201ENST00000296449 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
CCDC36-201ENST00000296449 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
CCDC36-201ENST00000296449 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
CCDC36-201ENST00000296449 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
CCDC36-201ENST00000296449 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
CCDC36-201ENST00000296449 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
CCDC36-201ENST00000296449 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
CCDC36-201ENST00000296449 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
CCDC36-201ENST00000296449 USH2AO75445 5202 aa3.84□□□□□ -1.79
CCDC36-201ENST00000296449 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
CCDC36-201ENST00000296449 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
CCDC36-201ENST00000296449 KMT2DO14686 5537 aa3.7□□□□□ -1.82
CCDC36-201ENST00000296449 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
CCDC36-201ENST00000296449 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
CCDC36-201ENST00000296449 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
CCDC36-201ENST00000296449 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
CCDC36-201ENST00000296449 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms