RNA–Protein interactions for RNA: ENST00000295971.11

RBM47-201, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RBM47, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-201ENST00000295971 DNAH3Q8TD57 4116 aa6.6□□□□□ -1.35
RBM47-201ENST00000295971 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
RBM47-201ENST00000295971 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
RBM47-201ENST00000295971 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
RBM47-201ENST00000295971 FAT1Q14517 4588 aa6.58□□□□□ -1.36
RBM47-201ENST00000295971 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
RBM47-201ENST00000295971 DNAH7Q8WXX0 4024 aa6.56□□□□□ -1.36
RBM47-201ENST00000295971 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
RBM47-201ENST00000295971 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
RBM47-201ENST00000295971 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
RBM47-201ENST00000295971 A0A0A0MQY5 61 aa6.51□□□□□ -1.37
RBM47-201ENST00000295971 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
RBM47-201ENST00000295971 TNP1P09430 55 aa6.48□□□□□ -1.37
RBM47-201ENST00000295971 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
RBM47-201ENST00000295971 DNAH6Q9C0G6 4158 aa6.43□□□□□ -1.38
RBM47-201ENST00000295971 VPS13BQ7Z7G8 4022 aa6.42□□□□□ -1.38
RBM47-201ENST00000295971 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
RBM47-201ENST00000295971 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
RBM47-201ENST00000295971 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
RBM47-201ENST00000295971 DYNC2H1Q8NCM8 4307 aaKnown RBP6.38□□□□□ -1.39
RBM47-201ENST00000295971 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
RBM47-201ENST00000295971 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
RBM47-201ENST00000295971 SACSQ9NZJ4 4579 aa6.26□□□□□ -1.41
RBM47-201ENST00000295971 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
RBM47-201ENST00000295971 HYDINQ4G0P3 5121 aa6.2□□□□□ -1.42
RBM47-201ENST00000295971 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
RBM47-201ENST00000295971 FAT2Q9NYQ8 4349 aa6.2□□□□□ -1.42
RBM47-201ENST00000295971 RYR1P21817 5038 aa6.17□□□□□ -1.42
RBM47-201ENST00000295971 KIAA1109Q2LD37 5005 aa6.17□□□□□ -1.42
RBM47-201ENST00000295971 PKHD1P08F94 4074 aa6.17□□□□□ -1.42
RBM47-201ENST00000295971 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.42
RBM47-201ENST00000295971 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
RBM47-201ENST00000295971 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
RBM47-201ENST00000295971 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
RBM47-201ENST00000295971 RYR3Q15413 4870 aa6.02□□□□□ -1.45
RBM47-201ENST00000295971 KRTAP17-1Q9BYP8 105 aa5.99□□□□□ -1.45
RBM47-201ENST00000295971 KRTAP4-1Q9BYQ7 146 aa5.98□□□□□ -1.45
RBM47-201ENST00000295971 PKD1P98161 4303 aa5.94□□□□□ -1.46
RBM47-201ENST00000295971 LRP2P98164 4655 aa5.93□□□□□ -1.46
RBM47-201ENST00000295971 RYR2Q92736 4967 aa5.88□□□□□ -1.47
RBM47-201ENST00000295971 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
RBM47-201ENST00000295971 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
RBM47-201ENST00000295971 HSPG2P98160 4391 aa5.76□□□□□ -1.49
RBM47-201ENST00000295971 LPAP08519 4548 aa5.66□□□□□ -1.5
RBM47-201ENST00000295971 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
RBM47-201ENST00000295971 HERC2O95714 4834 aa5.63□□□□□ -1.51
RBM47-201ENST00000295971 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
RBM47-201ENST00000295971 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
RBM47-201ENST00000295971 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
RBM47-201ENST00000295971 TNXBP22105 4242 aa5.58□□□□□ -1.52
RBM47-201ENST00000295971 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
RBM47-201ENST00000295971 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
RBM47-201ENST00000295971 MT1HP80294 61 aa5.5□□□□□ -1.53
RBM47-201ENST00000295971 MT2AP02795 61 aa5.47□□□□□ -1.53
RBM47-201ENST00000295971 EPPK1P58107 5090 aaKnown RBP5.46□□□□□ -1.54
RBM47-201ENST00000295971 MT1FP04733 61 aa5.44□□□□□ -1.54
RBM47-201ENST00000295971 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.55
RBM47-201ENST00000295971 BIRC6Q9NR09 4857 aa5.37□□□□□ -1.55
RBM47-201ENST00000295971 ABCA13Q86UQ4 5058 aa5.37□□□□□ -1.55
RBM47-201ENST00000295971 KRTAP19-2Q3LHN2 52 aa5.33□□□□□ -1.56
RBM47-201ENST00000295971 INE1O15225 51 aa5.29□□□□□ -1.56
RBM47-201ENST00000295971 MUC2Q02817 5179 aa5.28□□□□□ -1.56
RBM47-201ENST00000295971 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
RBM47-201ENST00000295971 LCE2CQ5TA81 110 aa5.26□□□□□ -1.57
RBM47-201ENST00000295971 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
RBM47-201ENST00000295971 HERC1Q15751 4861 aa5.23□□□□□ -1.57
RBM47-201ENST00000295971 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
RBM47-201ENST00000295971 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
RBM47-201ENST00000295971 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
RBM47-201ENST00000295971 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
RBM47-201ENST00000295971 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
RBM47-201ENST00000295971 MT1XP80297 61 aa5.13□□□□□ -1.59
RBM47-201ENST00000295971 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
RBM47-201ENST00000295971 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
RBM47-201ENST00000295971 MT1BP07438 61 aa5.12□□□□□ -1.59
RBM47-201ENST00000295971 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
RBM47-201ENST00000295971 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
RBM47-201ENST00000295971 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
RBM47-201ENST00000295971 RNF213Q63HN8 5207 aa5.09□□□□□ -1.59
RBM47-201ENST00000295971 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
RBM47-201ENST00000295971 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
RBM47-201ENST00000295971 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
RBM47-201ENST00000295971 HMCN2Q8NDA2 5059 aa4.96□□□□□ -1.62
RBM47-201ENST00000295971 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
RBM47-201ENST00000295971 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
RBM47-201ENST00000295971 LCE2BO14633 110 aa4.8□□□□□ -1.64
RBM47-201ENST00000295971 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
RBM47-201ENST00000295971 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
RBM47-201ENST00000295971 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
RBM47-201ENST00000295971 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
RBM47-201ENST00000295971 MT1GP13640 62 aa4.56□□□□□ -1.68
RBM47-201ENST00000295971 USH2AO75445 5202 aa4.54□□□□□ -1.68
RBM47-201ENST00000295971 MT1LQ93083 61 aa4.53□□□□□ -1.68
RBM47-201ENST00000295971 KRTAP9-2Q9BYQ4 174 aa4.52□□□□□ -1.69
RBM47-201ENST00000295971 MT1EP04732 61 aa4.5□□□□□ -1.69
RBM47-201ENST00000295971 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
RBM47-201ENST00000295971 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
RBM47-201ENST00000295971 KMT2DO14686 5537 aa4.47□□□□□ -1.69
RBM47-201ENST00000295971 LCE2AQ5TA79 106 aaPredicted RBP4.46□□□□□ -1.7
RBM47-201ENST00000295971 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms