RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 HERC1Q15751 4861 aa3.47□□□□□ -1.85
NCKAP1L-201ENST00000293373 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
NCKAP1L-201ENST00000293373 SMG1Q96Q15 3661 aaKnown RBP3.46□□□□□ -1.86
NCKAP1L-201ENST00000293373 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
NCKAP1L-201ENST00000293373 ANK2Q01484 3957 aa3.44□□□□□ -1.86
NCKAP1L-201ENST00000293373 RYR3Q15413 4870 aa3.43□□□□□ -1.86
NCKAP1L-201ENST00000293373 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
NCKAP1L-201ENST00000293373 DNAH1Q9P2D7 4330 aa3.42□□□□□ -1.86
NCKAP1L-201ENST00000293373 MUC3AQ02505 3323 aa3.42□□□□□ -1.86
NCKAP1L-201ENST00000293373 RYR2Q92736 4967 aa3.42□□□□□ -1.86
NCKAP1L-201ENST00000293373 SVEP1Q4LDE5 3571 aa3.39□□□□□ -1.87
NCKAP1L-201ENST00000293373 VPS13DQ5THJ4 4388 aa3.39□□□□□ -1.87
NCKAP1L-201ENST00000293373 MT1HP80294 61 aa3.38□□□□□ -1.87
NCKAP1L-201ENST00000293373 DNAH17Q9UFH2 4485 aa3.38□□□□□ -1.87
NCKAP1L-201ENST00000293373 CMYA5Q8N3K9 4069 aa3.37□□□□□ -1.87
NCKAP1L-201ENST00000293373 DYNC2H1Q8NCM8 4307 aaKnown RBP3.36□□□□□ -1.87
NCKAP1L-201ENST00000293373 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
NCKAP1L-201ENST00000293373 CSMD2Q7Z408 3487 aa3.33□□□□□ -1.88
NCKAP1L-201ENST00000293373 DNAH6Q9C0G6 4158 aa3.33□□□□□ -1.88
NCKAP1L-201ENST00000293373 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
NCKAP1L-201ENST00000293373 DNAH3Q8TD57 4116 aa3.32□□□□□ -1.88
NCKAP1L-201ENST00000293373 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
NCKAP1L-201ENST00000293373 VPS13CQ709C8 3753 aa3.31□□□□□ -1.88
NCKAP1L-201ENST00000293373 SACSQ9NZJ4 4579 aa3.3□□□□□ -1.88
NCKAP1L-201ENST00000293373 LORP23490 312 aaPredicted RBP3.3□□□□□ -1.88
NCKAP1L-201ENST00000293373 LRP1BQ9NZR2 4599 aa3.3□□□□□ -1.88
NCKAP1L-201ENST00000293373 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
NCKAP1L-201ENST00000293373 MT2AP02795 61 aa3.3□□□□□ -1.88
NCKAP1L-201ENST00000293373 ZNF469Q96JG9 3925 aaPredicted RBP3.28□□□□□ -1.88
NCKAP1L-201ENST00000293373 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
NCKAP1L-201ENST00000293373 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
NCKAP1L-201ENST00000293373 DNAH8Q96JB1 4490 aa3.26□□□□□ -1.89
NCKAP1L-201ENST00000293373 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
NCKAP1L-201ENST00000293373 KIAA1109Q2LD37 5005 aa3.25□□□□□ -1.89
NCKAP1L-201ENST00000293373 FAT2Q9NYQ8 4349 aa3.22□□□□□ -1.89
NCKAP1L-201ENST00000293373 MT1FP04733 61 aa3.21□□□□□ -1.9
NCKAP1L-201ENST00000293373 HERC2O95714 4834 aa3.19□□□□□ -1.9
NCKAP1L-201ENST00000293373 KMT2CQ8NEZ4 4911 aaKnown RBP3.19□□□□□ -1.9
NCKAP1L-201ENST00000293373 CRCT1Q9UGL9 99 aa3.19□□□□□ -1.9
NCKAP1L-201ENST00000293373 HSPG2P98160 4391 aa3.18□□□□□ -1.9
NCKAP1L-201ENST00000293373 MYCBP2O75592 4640 aa3.16□□□□□ -1.9
NCKAP1L-201ENST00000293373 KRTAP17-1Q9BYP8 105 aa3.15□□□□□ -1.9
NCKAP1L-201ENST00000293373 FAT1Q14517 4588 aa3.15□□□□□ -1.91
NCKAP1L-201ENST00000293373 LCE2DQ5TA82 110 aaPredicted RBP3.14□□□□□ -1.91
NCKAP1L-201ENST00000293373 APOBP04114 4563 aaKnown RBP3.14□□□□□ -1.91
NCKAP1L-201ENST00000293373 PRKDCP78527 4128 aaKnown RBP3.12□□□□□ -1.91
NCKAP1L-201ENST00000293373 DNAH7Q8WXX0 4024 aa3.12□□□□□ -1.91
NCKAP1L-201ENST00000293373 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
NCKAP1L-201ENST00000293373 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
NCKAP1L-201ENST00000293373 ABCA13Q86UQ4 5058 aa3.06□□□□□ -1.92
NCKAP1L-201ENST00000293373 HYDINQ4G0P3 5121 aa3.05□□□□□ -1.92
NCKAP1L-201ENST00000293373 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
NCKAP1L-201ENST00000293373 FAT3Q8TDW7 4589 aa3.01□□□□□ -1.93
NCKAP1L-201ENST00000293373 PKHD1L1Q86WI1 4243 aa3.01□□□□□ -1.93
NCKAP1L-201ENST00000293373 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
NCKAP1L-201ENST00000293373 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
NCKAP1L-201ENST00000293373 KMT2AQ03164 3969 aa2.99□□□□□ -1.93
NCKAP1L-201ENST00000293373 KRTAP10-7P60409 375 aaPredicted RBP2.99□□□□□ -1.93
NCKAP1L-201ENST00000293373 FRAS1Q86XX4 4008 aa2.98□□□□□ -1.93
NCKAP1L-201ENST00000293373 KRTAP19-1Q8IUB9 90 aa2.98□□□□□ -1.93
NCKAP1L-201ENST00000293373 LRP1Q07954 4544 aaKnown RBP2.96□□□□□ -1.93
NCKAP1L-201ENST00000293373 HECTD4Q9Y4D8 3996 aa2.96□□□□□ -1.94
NCKAP1L-201ENST00000293373 LCE2CQ5TA81 110 aa2.96□□□□□ -1.94
NCKAP1L-201ENST00000293373 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
NCKAP1L-201ENST00000293373 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
NCKAP1L-201ENST00000293373 KRTAP9-8Q9BYQ0 159 aa2.95□□□□□ -1.94
NCKAP1L-201ENST00000293373 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
NCKAP1L-201ENST00000293373 PKHD1P08F94 4074 aa2.93□□□□□ -1.94
NCKAP1L-201ENST00000293373 KRTAP9-3Q9BYQ3 159 aa2.92□□□□□ -1.94
NCKAP1L-201ENST00000293373 MT1BP07438 61 aa2.92□□□□□ -1.94
NCKAP1L-201ENST00000293373 MT1XP80297 61 aa2.92□□□□□ -1.94
NCKAP1L-201ENST00000293373 SPRR2EP22531 72 aa2.91□□□□□ -1.94
NCKAP1L-201ENST00000293373 SPRR2BP35325 72 aa2.91□□□□□ -1.94
NCKAP1L-201ENST00000293373 SPRR2AP35326 72 aa2.91□□□□□ -1.94
NCKAP1L-201ENST00000293373 EPPK1P58107 5090 aaKnown RBP2.9□□□□□ -1.95
NCKAP1L-201ENST00000293373 LYSTQ99698 3801 aa2.89□□□□□ -1.95
NCKAP1L-201ENST00000293373 MT3P25713 68 aa2.88□□□□□ -1.95
NCKAP1L-201ENST00000293373 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
NCKAP1L-201ENST00000293373 CSMD3Q7Z407 3707 aa2.87□□□□□ -1.95
NCKAP1L-201ENST00000293373 PKD1P98161 4303 aa2.87□□□□□ -1.95
NCKAP1L-201ENST00000293373 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
NCKAP1L-201ENST00000293373 SPRR2DP22532 72 aa2.84□□□□□ -1.95
NCKAP1L-201ENST00000293373 LCE2BO14633 110 aa2.79□□□□□ -1.96
NCKAP1L-201ENST00000293373 MT1GP13640 62 aa2.79□□□□□ -1.96
NCKAP1L-201ENST00000293373 HMCN2Q8NDA2 5059 aa2.79□□□□□ -1.96
NCKAP1L-201ENST00000293373 TNXBP22105 4242 aa2.75□□□□□ -1.97
NCKAP1L-201ENST00000293373 LRP2P98164 4655 aa2.74□□□□□ -1.97
NCKAP1L-201ENST00000293373 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
NCKAP1L-201ENST00000293373 KRTAP9-2Q9BYQ4 174 aa2.71□□□□□ -1.98
NCKAP1L-201ENST00000293373 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.98
NCKAP1L-201ENST00000293373 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
NCKAP1L-201ENST00000293373 LCE2AQ5TA79 106 aaPredicted RBP2.7□□□□□ -1.98
NCKAP1L-201ENST00000293373 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
NCKAP1L-201ENST00000293373 KRTAP4-8A0A0G2JLE6 195 aa2.69□□□□□ -1.98
NCKAP1L-201ENST00000293373 KRTAP4-8Q9BYQ9 185 aa2.69□□□□□ -1.98
NCKAP1L-201ENST00000293373 FAT4Q6V0I7 4981 aa2.68□□□□□ -1.98
NCKAP1L-201ENST00000293373 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
NCKAP1L-201ENST00000293373 MT1EP04732 61 aa2.64□□□□□ -1.99
NCKAP1L-201ENST00000293373 MT1LQ93083 61 aa2.64□□□□□ -1.99
NCKAP1L-201ENST00000293373 KRTAP9-6A0A140TA67 174 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms