RNA–Protein interactions for RNA: ENST00000290974.6

ZFYVE28-201, Transcript of zinc finger FYVE-type containing 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZFYVE28, Length 4,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-201ENST00000290974 ALMS1Q8TCU4 4167 aa7.79□□□□□ -1.16
ZFYVE28-201ENST00000290974 KRTAP10-4P60372 401 aaPredicted RBP7.72□□□□□ -1.17
ZFYVE28-201ENST00000290974 VPS13BQ7Z7G8 4022 aa7.72□□□□□ -1.17
ZFYVE28-201ENST00000290974 A0A0A0MQY5 61 aa7.69□□□□□ -1.18
ZFYVE28-201ENST00000290974 XP32Q5T750 250 aa7.69□□□□□ -1.18
ZFYVE28-201ENST00000290974 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
ZFYVE28-201ENST00000290974 P0C880 135 aa7.64□□□□□ -1.19
ZFYVE28-201ENST00000290974 KMT2CQ8NEZ4 4911 aaKnown RBP7.6□□□□□ -1.19
ZFYVE28-201ENST00000290974 DYNC1H1Q14204 4646 aaKnown RBP7.58□□□□□ -1.2
ZFYVE28-201ENST00000290974 FAT1Q14517 4588 aa7.58□□□□□ -1.2
ZFYVE28-201ENST00000290974 HYDINQ4G0P3 5121 aa7.57□□□□□ -1.2
ZFYVE28-201ENST00000290974 SACSQ9NZJ4 4579 aa7.55□□□□□ -1.2
ZFYVE28-201ENST00000290974 FAT2Q9NYQ8 4349 aa7.55□□□□□ -1.2
ZFYVE28-201ENST00000290974 PKD1P98161 4303 aa7.53□□□□□ -1.2
ZFYVE28-201ENST00000290974 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
ZFYVE28-201ENST00000290974 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
ZFYVE28-201ENST00000290974 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
ZFYVE28-201ENST00000290974 RYR2Q92736 4967 aa7.49□□□□□ -1.21
ZFYVE28-201ENST00000290974 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
ZFYVE28-201ENST00000290974 PKHD1P08F94 4074 aa7.43□□□□□ -1.22
ZFYVE28-201ENST00000290974 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
ZFYVE28-201ENST00000290974 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
ZFYVE28-201ENST00000290974 RYR3Q15413 4870 aa7.39□□□□□ -1.23
ZFYVE28-201ENST00000290974 KIAA1109Q2LD37 5005 aa7.36□□□□□ -1.23
ZFYVE28-201ENST00000290974 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
ZFYVE28-201ENST00000290974 TNP1P09430 55 aa7.34□□□□□ -1.23
ZFYVE28-201ENST00000290974 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
ZFYVE28-201ENST00000290974 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
ZFYVE28-201ENST00000290974 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
ZFYVE28-201ENST00000290974 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
ZFYVE28-201ENST00000290974 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
ZFYVE28-201ENST00000290974 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
ZFYVE28-201ENST00000290974 LRP1Q07954 4544 aaKnown RBP7.22□□□□□ -1.25
ZFYVE28-201ENST00000290974 PKHD1L1Q86WI1 4243 aa7.2□□□□□ -1.26
ZFYVE28-201ENST00000290974 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
ZFYVE28-201ENST00000290974 FAT3Q8TDW7 4589 aa7.18□□□□□ -1.26
ZFYVE28-201ENST00000290974 RYR1P21817 5038 aa7.11□□□□□ -1.27
ZFYVE28-201ENST00000290974 KRTAP10-10P60014 251 aa7.09□□□□□ -1.27
ZFYVE28-201ENST00000290974 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
ZFYVE28-201ENST00000290974 HERC2O95714 4834 aa7.02□□□□□ -1.29
ZFYVE28-201ENST00000290974 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
ZFYVE28-201ENST00000290974 HSPG2P98160 4391 aa6.99□□□□□ -1.29
ZFYVE28-201ENST00000290974 TNXBP22105 4242 aa6.98□□□□□ -1.29
ZFYVE28-201ENST00000290974 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
ZFYVE28-201ENST00000290974 LRP2P98164 4655 aa6.86□□□□□ -1.31
ZFYVE28-201ENST00000290974 ABCA13Q86UQ4 5058 aa6.85□□□□□ -1.31
ZFYVE28-201ENST00000290974 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
ZFYVE28-201ENST00000290974 KRTAP4-1Q9BYQ7 146 aa6.77□□□□□ -1.33
ZFYVE28-201ENST00000290974 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.33
ZFYVE28-201ENST00000290974 LPAP08519 4548 aa6.66□□□□□ -1.34
ZFYVE28-201ENST00000290974 HERC1Q15751 4861 aa6.59□□□□□ -1.35
ZFYVE28-201ENST00000290974 PRO2289Q9P1D8 64 aa6.56□□□□□ -1.36
ZFYVE28-201ENST00000290974 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
ZFYVE28-201ENST00000290974 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
ZFYVE28-201ENST00000290974 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
ZFYVE28-201ENST00000290974 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
ZFYVE28-201ENST00000290974 UBR4Q5T4S7 5183 aa6.27□□□□□ -1.41
ZFYVE28-201ENST00000290974 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
ZFYVE28-201ENST00000290974 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
ZFYVE28-201ENST00000290974 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
ZFYVE28-201ENST00000290974 MUC2Q02817 5179 aa6.19□□□□□ -1.42
ZFYVE28-201ENST00000290974 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
ZFYVE28-201ENST00000290974 RNF213Q63HN8 5207 aa6.19□□□□□ -1.42
ZFYVE28-201ENST00000290974 KRTAP10-12P60413 245 aa6.19□□□□□ -1.42
ZFYVE28-201ENST00000290974 MT1HP80294 61 aa6.14□□□□□ -1.43
ZFYVE28-201ENST00000290974 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
ZFYVE28-201ENST00000290974 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
ZFYVE28-201ENST00000290974 LCE2CQ5TA81 110 aa6.13□□□□□ -1.43
ZFYVE28-201ENST00000290974 MT2AP02795 61 aa6.09□□□□□ -1.43
ZFYVE28-201ENST00000290974 MT1FP04733 61 aa6.07□□□□□ -1.44
ZFYVE28-201ENST00000290974 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
ZFYVE28-201ENST00000290974 FAT4Q6V0I7 4981 aa5.96□□□□□ -1.46
ZFYVE28-201ENST00000290974 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
ZFYVE28-201ENST00000290974 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
ZFYVE28-201ENST00000290974 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
ZFYVE28-201ENST00000290974 OBSCNQ5VST9 7968 aa5.89□□□□□ -1.47
ZFYVE28-201ENST00000290974 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
ZFYVE28-201ENST00000290974 INE1O15225 51 aa5.84□□□□□ -1.48
ZFYVE28-201ENST00000290974 MT1BP07438 61 aa5.82□□□□□ -1.48
ZFYVE28-201ENST00000290974 MT1XP80297 61 aa5.81□□□□□ -1.48
ZFYVE28-201ENST00000290974 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
ZFYVE28-201ENST00000290974 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
ZFYVE28-201ENST00000290974 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
ZFYVE28-201ENST00000290974 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
ZFYVE28-201ENST00000290974 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
ZFYVE28-201ENST00000290974 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
ZFYVE28-201ENST00000290974 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
ZFYVE28-201ENST00000290974 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
ZFYVE28-201ENST00000290974 LCE2BO14633 110 aa5.43□□□□□ -1.54
ZFYVE28-201ENST00000290974 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
ZFYVE28-201ENST00000290974 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
ZFYVE28-201ENST00000290974 USH2AO75445 5202 aa5.36□□□□□ -1.55
ZFYVE28-201ENST00000290974 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
ZFYVE28-201ENST00000290974 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
ZFYVE28-201ENST00000290974 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
ZFYVE28-201ENST00000290974 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
ZFYVE28-201ENST00000290974 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
ZFYVE28-201ENST00000290974 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
ZFYVE28-201ENST00000290974 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
ZFYVE28-201ENST00000290974 KRTAP19-7Q3SYF9 63 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms