RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 LRP1BQ9NZR2 4599 aa2.68□□□□□ -1.98
PPP1R9A-201ENST00000289495 FAT2Q9NYQ8 4349 aa2.66□□□□□ -1.98
PPP1R9A-201ENST00000289495 UQCR11O14957 56 aa2.66□□□□□ -1.98
PPP1R9A-201ENST00000289495 C20orf166-AS1Q96NR2 134 aa2.66□□□□□ -1.98
PPP1R9A-201ENST00000289495 A8MUU9 505 aa2.65□□□□□ -1.98
PPP1R9A-201ENST00000289495 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.98
PPP1R9A-201ENST00000289495 PKD1P98161 4303 aa2.65□□□□□ -1.98
PPP1R9A-201ENST00000289495 HYDINQ4G0P3 5121 aa2.64□□□□□ -1.99
PPP1R9A-201ENST00000289495 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
PPP1R9A-201ENST00000289495 KRTAP10-4P60372 401 aaPredicted RBP2.63□□□□□ -1.99
PPP1R9A-201ENST00000289495 KRTAP4-5Q9BYR2 181 aa2.63□□□□□ -1.99
PPP1R9A-201ENST00000289495 A6NN06 94 aa2.63□□□□□ -1.99
PPP1R9A-201ENST00000289495 Q5VSD8 79 aa2.63□□□□□ -1.99
PPP1R9A-201ENST00000289495 VPS13BQ7Z7G8 4022 aa2.63□□□□□ -1.99
PPP1R9A-201ENST00000289495 DYNC1H1Q14204 4646 aaKnown RBP2.62□□□□□ -1.99
PPP1R9A-201ENST00000289495 SACSQ9NZJ4 4579 aa2.61□□□□□ -1.99
PPP1R9A-201ENST00000289495 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
PPP1R9A-201ENST00000289495 COX6B2Q6YFQ2 88 aa2.59□□□□□ -1.99
PPP1R9A-201ENST00000289495 PKHD1P08F94 4074 aa2.58□□□□□ -2
PPP1R9A-201ENST00000289495 FAT1Q14517 4588 aa2.57□□□□□ -2
PPP1R9A-201ENST00000289495 KRTAP10-8P60410 259 aa2.57□□□□□ -2
PPP1R9A-201ENST00000289495 APOBP04114 4563 aaKnown RBP2.57□□□□□ -2
PPP1R9A-201ENST00000289495 A0A0A0MQY5 61 aa2.57□□□□□ -2
PPP1R9A-201ENST00000289495 RPL37P61927 97 aaKnown RBP2.57□□□□□ -2
PPP1R9A-201ENST00000289495 A0A1B0GU33 70 aa2.56□□□□□ -2
PPP1R9A-201ENST00000289495 RBM12B-AS1Q9P1G2 102 aa2.55□□□□□ -2
PPP1R9A-201ENST00000289495 K7ERS5 55 aa2.55□□□□□ -2
PPP1R9A-201ENST00000289495 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
PPP1R9A-201ENST00000289495 RYR2Q92736 4967 aa2.53□□□□□ -2
PPP1R9A-201ENST00000289495 PRAC1Q96KF2 57 aa2.53□□□□□ -2
PPP1R9A-201ENST00000289495 PKHD1L1Q86WI1 4243 aa2.53□□□□□ -2.01
PPP1R9A-201ENST00000289495 S4R3F8 94 aa2.52□□□□□ -2.01
PPP1R9A-201ENST00000289495 H0YAA0 97 aa2.51□□□□□ -2.01
PPP1R9A-201ENST00000289495 ADM2Q7Z4H4 148 aa2.5□□□□□ -2.01
PPP1R9A-201ENST00000289495 MT1HL1P0DM35 61 aa2.48□□□□□ -2.01
PPP1R9A-201ENST00000289495 TPRXLQ17RH7 258 aa2.47□□□□□ -2.01
PPP1R9A-201ENST00000289495 FAT3Q8TDW7 4589 aa2.46□□□□□ -2.01
PPP1R9A-201ENST00000289495 CSAG1Q6PB30 78 aa2.46□□□□□ -2.02
PPP1R9A-201ENST00000289495 KMT2CQ8NEZ4 4911 aaKnown RBP2.46□□□□□ -2.02
PPP1R9A-201ENST00000289495 A0A0D9SG42 100 aa2.46□□□□□ -2.02
PPP1R9A-201ENST00000289495 LRP1Q07954 4544 aaKnown RBP2.45□□□□□ -2.02
PPP1R9A-201ENST00000289495 HSPG2P98160 4391 aa2.45□□□□□ -2.02
PPP1R9A-201ENST00000289495 LINC01554Q52M75 96 aa2.45□□□□□ -2.02
PPP1R9A-201ENST00000289495 RYR1P21817 5038 aa2.44□□□□□ -2.02
PPP1R9A-201ENST00000289495 TNXBP22105 4242 aa2.43□□□□□ -2.02
PPP1R9A-201ENST00000289495 KRTAP10-6P60371 365 aaPredicted RBP2.42□□□□□ -2.02
PPP1R9A-201ENST00000289495 SEC61BP60468 96 aaKnown RBP2.42□□□□□ -2.02
PPP1R9A-201ENST00000289495 P0C880 135 aa2.41□□□□□ -2.02
PPP1R9A-201ENST00000289495 ROMO1P60602 79 aa2.41□□□□□ -2.02
PPP1R9A-201ENST00000289495 KIAA1109Q2LD37 5005 aa2.41□□□□□ -2.02
PPP1R9A-201ENST00000289495 RYR3Q15413 4870 aa2.41□□□□□ -2.02
PPP1R9A-201ENST00000289495 KRTAP25-1Q3LHN0 102 aa2.41□□□□□ -2.02
PPP1R9A-201ENST00000289495 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
PPP1R9A-201ENST00000289495 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
PPP1R9A-201ENST00000289495 MYCBP2O75592 4640 aa2.39□□□□□ -2.03
PPP1R9A-201ENST00000289495 M0QZ58 72 aa2.38□□□□□ -2.03
PPP1R9A-201ENST00000289495 CRIPTQ9P021 101 aa2.38□□□□□ -2.03
PPP1R9A-201ENST00000289495 R4GN34 69 aa2.35□□□□□ -2.03
PPP1R9A-201ENST00000289495 M0R2T5 61 aa2.35□□□□□ -2.03
PPP1R9A-201ENST00000289495 KRTAP12-2P59991 146 aa2.34□□□□□ -2.04
PPP1R9A-201ENST00000289495 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
PPP1R9A-201ENST00000289495 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
PPP1R9A-201ENST00000289495 LRP2P98164 4655 aa2.31□□□□□ -2.04
PPP1R9A-201ENST00000289495 EPPK1P58107 5090 aaKnown RBP2.31□□□□□ -2.04
PPP1R9A-201ENST00000289495 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
PPP1R9A-201ENST00000289495 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
PPP1R9A-201ENST00000289495 KRTAP4-1Q9BYQ7 146 aa2.28□□□□□ -2.04
PPP1R9A-201ENST00000289495 LPAP08519 4548 aa2.27□□□□□ -2.05
PPP1R9A-201ENST00000289495 HERC2O95714 4834 aa2.26□□□□□ -2.05
PPP1R9A-201ENST00000289495 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
PPP1R9A-201ENST00000289495 KRTAP9-8Q9BYQ0 159 aa2.25□□□□□ -2.05
PPP1R9A-201ENST00000289495 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
PPP1R9A-201ENST00000289495 MUC17Q685J3 4493 aa2.2□□□□□ -2.06
PPP1R9A-201ENST00000289495 KRTAP19-2Q3LHN2 52 aa2.2□□□□□ -2.06
PPP1R9A-201ENST00000289495 LCE1AQ5T7P2 110 aa2.18□□□□□ -2.06
PPP1R9A-201ENST00000289495 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
PPP1R9A-201ENST00000289495 PCLOQ9Y6V0 5065 aa2.16□□□□□ -2.06
PPP1R9A-201ENST00000289495 PLAC4Q8WY50 150 aa2.15□□□□□ -2.07
PPP1R9A-201ENST00000289495 TNP1P09430 55 aa2.14□□□□□ -2.07
PPP1R9A-201ENST00000289495 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
PPP1R9A-201ENST00000289495 HERC1Q15751 4861 aa2.12□□□□□ -2.07
PPP1R9A-201ENST00000289495 FLGP20930 4061 aaPredicted RBP2.12□□□□□ -2.07
PPP1R9A-201ENST00000289495 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
PPP1R9A-201ENST00000289495 KRTAP10-10P60014 251 aa2.1□□□□□ -2.07
PPP1R9A-201ENST00000289495 HMCN2Q8NDA2 5059 aa2.09□□□□□ -2.08
PPP1R9A-201ENST00000289495 MT1HP80294 61 aa2.08□□□□□ -2.08
PPP1R9A-201ENST00000289495 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
PPP1R9A-201ENST00000289495 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
PPP1R9A-201ENST00000289495 MUC2Q02817 5179 aa2.05□□□□□ -2.08
PPP1R9A-201ENST00000289495 MT2AP02795 61 aa2.05□□□□□ -2.08
PPP1R9A-201ENST00000289495 MT1FP04733 61 aa2.04□□□□□ -2.08
PPP1R9A-201ENST00000289495 UBR4Q5T4S7 5183 aa2.03□□□□□ -2.08
PPP1R9A-201ENST00000289495 RNF213Q63HN8 5207 aa2.01□□□□□ -2.09
PPP1R9A-201ENST00000289495 FSIP2Q5CZC0 6907 aa2□□□□□ -2.09
PPP1R9A-201ENST00000289495 KRTAP19-8Q3LI54 63 aa2□□□□□ -2.09
PPP1R9A-201ENST00000289495 FAT4Q6V0I7 4981 aa1.99□□□□□ -2.09
PPP1R9A-201ENST00000289495 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
PPP1R9A-201ENST00000289495 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
PPP1R9A-201ENST00000289495 PRO2289Q9P1D8 64 aa1.97□□□□□ -2.09
PPP1R9A-201ENST00000289495 MT1BP07438 61 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms