RNA–Protein interactions for RNA: ENST00000284483.12

TNIK-201, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-201ENST00000284483 DNAH3Q8TD57 4116 aa4.62□□□□□ -1.67
TNIK-201ENST00000284483 TNP1P09430 55 aa4.6□□□□□ -1.67
TNIK-201ENST00000284483 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
TNIK-201ENST00000284483 PLECQ15149 4684 aaKnown RBP4.54□□□□□ -1.68
TNIK-201ENST00000284483 KRTAP3-3Q9BYR6 98 aa4.53□□□□□ -1.68
TNIK-201ENST00000284483 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
TNIK-201ENST00000284483 DNAH2Q9P225 4427 aa4.52□□□□□ -1.69
TNIK-201ENST00000284483 A0A1B0GVY2 172 aa4.51□□□□□ -1.69
TNIK-201ENST00000284483 DNAH11Q96DT5 4516 aa4.51□□□□□ -1.69
TNIK-201ENST00000284483 DNAH6Q9C0G6 4158 aa4.47□□□□□ -1.69
TNIK-201ENST00000284483 DYNC2H1Q8NCM8 4307 aaKnown RBP4.46□□□□□ -1.7
TNIK-201ENST00000284483 LRP1BQ9NZR2 4599 aa4.43□□□□□ -1.7
TNIK-201ENST00000284483 DNHD1Q96M86 4753 aa4.4□□□□□ -1.71
TNIK-201ENST00000284483 PRKDCP78527 4128 aaKnown RBP4.4□□□□□ -1.71
TNIK-201ENST00000284483 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
TNIK-201ENST00000284483 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
TNIK-201ENST00000284483 DNAH5Q8TE73 4624 aa4.34□□□□□ -1.72
TNIK-201ENST00000284483 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
TNIK-201ENST00000284483 MYCBP2O75592 4640 aa4.32□□□□□ -1.72
TNIK-201ENST00000284483 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
TNIK-201ENST00000284483 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
TNIK-201ENST00000284483 FAT2Q9NYQ8 4349 aa4.29□□□□□ -1.72
TNIK-201ENST00000284483 KRTAP10-10P60014 251 aa4.21□□□□□ -1.74
TNIK-201ENST00000284483 HSPG2P98160 4391 aa4.17□□□□□ -1.74
TNIK-201ENST00000284483 FAT1Q14517 4588 aa4.16□□□□□ -1.74
TNIK-201ENST00000284483 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.74
TNIK-201ENST00000284483 LORP23490 312 aaPredicted RBP4.15□□□□□ -1.75
TNIK-201ENST00000284483 LRP1Q07954 4544 aaKnown RBP4.13□□□□□ -1.75
TNIK-201ENST00000284483 INE1O15225 51 aa4.13□□□□□ -1.75
TNIK-201ENST00000284483 PKD1P98161 4303 aa4.12□□□□□ -1.75
TNIK-201ENST00000284483 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
TNIK-201ENST00000284483 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
TNIK-201ENST00000284483 KRTAP10-4P60372 401 aaPredicted RBP4.08□□□□□ -1.76
TNIK-201ENST00000284483 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
TNIK-201ENST00000284483 LPAP08519 4548 aa4.02□□□□□ -1.77
TNIK-201ENST00000284483 DYNC1H1Q14204 4646 aaKnown RBP4.02□□□□□ -1.77
TNIK-201ENST00000284483 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
TNIK-201ENST00000284483 BIRC6Q9NR09 4857 aa4□□□□□ -1.77
TNIK-201ENST00000284483 HYDINQ4G0P3 5121 aa3.97□□□□□ -1.77
TNIK-201ENST00000284483 TNXBP22105 4242 aa3.96□□□□□ -1.77
TNIK-201ENST00000284483 KRTAP17-1Q9BYP8 105 aa3.93□□□□□ -1.78
TNIK-201ENST00000284483 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
TNIK-201ENST00000284483 KRTAP4-5Q9BYR2 181 aa3.89□□□□□ -1.79
TNIK-201ENST00000284483 RYR1P21817 5038 aa3.87□□□□□ -1.79
TNIK-201ENST00000284483 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
TNIK-201ENST00000284483 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
TNIK-201ENST00000284483 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
TNIK-201ENST00000284483 LRP2P98164 4655 aa3.83□□□□□ -1.8
TNIK-201ENST00000284483 KMT2CQ8NEZ4 4911 aaKnown RBP3.82□□□□□ -1.8
TNIK-201ENST00000284483 RYR2Q92736 4967 aa3.82□□□□□ -1.8
TNIK-201ENST00000284483 RYR3Q15413 4870 aa3.82□□□□□ -1.8
TNIK-201ENST00000284483 KRTAP4-1Q9BYQ7 146 aa3.8□□□□□ -1.8
TNIK-201ENST00000284483 KIAA1109Q2LD37 5005 aa3.78□□□□□ -1.8
TNIK-201ENST00000284483 HERC2O95714 4834 aa3.75□□□□□ -1.81
TNIK-201ENST00000284483 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
TNIK-201ENST00000284483 EPPK1P58107 5090 aaKnown RBP3.72□□□□□ -1.81
TNIK-201ENST00000284483 PCLOQ9Y6V0 5065 aa3.62□□□□□ -1.83
TNIK-201ENST00000284483 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
TNIK-201ENST00000284483 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
TNIK-201ENST00000284483 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
TNIK-201ENST00000284483 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
TNIK-201ENST00000284483 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
TNIK-201ENST00000284483 MT2AP02795 61 aa3.49□□□□□ -1.85
TNIK-201ENST00000284483 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
TNIK-201ENST00000284483 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
TNIK-201ENST00000284483 MT1FP04733 61 aa3.48□□□□□ -1.85
TNIK-201ENST00000284483 KRTAP19-1Q8IUB9 90 aa3.46□□□□□ -1.86
TNIK-201ENST00000284483 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
TNIK-201ENST00000284483 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
TNIK-201ENST00000284483 MT1HP80294 61 aa3.44□□□□□ -1.86
TNIK-201ENST00000284483 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
TNIK-201ENST00000284483 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
TNIK-201ENST00000284483 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.87
TNIK-201ENST00000284483 MUC2Q02817 5179 aa3.39□□□□□ -1.87
TNIK-201ENST00000284483 HERC1Q15751 4861 aa3.35□□□□□ -1.87
TNIK-201ENST00000284483 MT1XP80297 61 aa3.31□□□□□ -1.88
TNIK-201ENST00000284483 UBR4Q5T4S7 5183 aa3.3□□□□□ -1.88
TNIK-201ENST00000284483 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
TNIK-201ENST00000284483 KRTAP4-8A0A0G2JLE6 195 aa3.26□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP4-8Q9BYQ9 185 aa3.26□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP9-6A0A140TA67 174 aa3.26□□□□□ -1.89
TNIK-201ENST00000284483 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
TNIK-201ENST00000284483 MT1BP07438 61 aa3.25□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP9-2Q9BYQ4 174 aa3.24□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP19-8Q3LI54 63 aa3.24□□□□□ -1.89
TNIK-201ENST00000284483 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
TNIK-201ENST00000284483 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
TNIK-201ENST00000284483 HMCN2Q8NDA2 5059 aa3.22□□□□□ -1.89
TNIK-201ENST00000284483 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
TNIK-201ENST00000284483 LCE2CQ5TA81 110 aa3.18□□□□□ -1.9
TNIK-201ENST00000284483 KRTAP9-8Q9BYQ0 159 aa3.18□□□□□ -1.9
TNIK-201ENST00000284483 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
TNIK-201ENST00000284483 MT1GP13640 62 aa3.14□□□□□ -1.91
TNIK-201ENST00000284483 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
TNIK-201ENST00000284483 SPRR2FQ96RM1 72 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms