RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CUBNO60494 3623 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 COX6A2Q02221 97 aa1.26□□□□□ -2.21
CHD1-201ENST00000284049 PKHD1L1Q86WI1 4243 aa1.26□□□□□ -2.21
CHD1-201ENST00000284049 PRO0255Q9UI72 69 aa1.25□□□□□ -2.21
CHD1-201ENST00000284049 LELP1Q5T871 98 aa1.25□□□□□ -2.21
CHD1-201ENST00000284049 KRTAP4-11Q9BYQ6 195 aa1.25□□□□□ -2.21
CHD1-201ENST00000284049 KRTAP4-5Q9BYR2 181 aa1.25□□□□□ -2.21
CHD1-201ENST00000284049 SPRR1AP35321 89 aa1.25□□□□□ -2.21
CHD1-201ENST00000284049 APOBP04114 4563 aaKnown RBP1.24□□□□□ -2.21
CHD1-201ENST00000284049 PCLOQ9Y6V0 5065 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 KRTAP13-3Q3SY46 172 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 TIMM8BQ9Y5J9 83 aaPredicted RBP1.24□□□□□ -2.21
CHD1-201ENST00000284049 SPRR1BP22528 89 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 SMIM2Q9BVW6 85 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 Q8IZM0 81 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 DNAH5Q8TE73 4624 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 FAT1Q14517 4588 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 A0A096LPF7 62 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 K7EQZ3 153 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 KRTAP13-1Q8IUC0 172 aa1.24□□□□□ -2.21
CHD1-201ENST00000284049 SPART-AS1P0CW21 52 aa1.23□□□□□ -2.21
CHD1-201ENST00000284049 RPS29P62273 56 aaKnown RBP1.23□□□□□ -2.21
CHD1-201ENST00000284049 ABCA13Q86UQ4 5058 aa1.23□□□□□ -2.21
CHD1-201ENST00000284049 FRAS1Q86XX4 4008 aa1.23□□□□□ -2.21
CHD1-201ENST00000284049 KRTAP4-2Q9BYR5 136 aa1.23□□□□□ -2.21
CHD1-201ENST00000284049 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
CHD1-201ENST00000284049 H3BSH0 61 aa1.22□□□□□ -2.21
CHD1-201ENST00000284049 DEFB131AP59861 70 aa1.22□□□□□ -2.21
CHD1-201ENST00000284049 PCOTHQ58A44 107 aa1.22□□□□□ -2.21
CHD1-201ENST00000284049 HMCN2Q8NDA2 5059 aa1.22□□□□□ -2.21
CHD1-201ENST00000284049 KRTAP4-9Q9BYQ8 210 aa1.22□□□□□ -2.21
CHD1-201ENST00000284049 HSPG2P98160 4391 aa1.22□□□□□ -2.21
CHD1-201ENST00000284049 FAT3Q8TDW7 4589 aa1.22□□□□□ -2.21
CHD1-201ENST00000284049 KMT2AQ03164 3969 aa1.22□□□□□ -2.21
CHD1-201ENST00000284049 SPRR5A0A1B0GTR4 108 aa1.21□□□□□ -2.22
CHD1-201ENST00000284049 KRTAP10-8P60410 259 aa1.21□□□□□ -2.22
CHD1-201ENST00000284049 DEFB136Q30KP8 78 aa1.2□□□□□ -2.22
CHD1-201ENST00000284049 KRTAP10-6P60371 365 aaPredicted RBP1.2□□□□□ -2.22
CHD1-201ENST00000284049 TP53AIP1Q9HCN2 124 aa1.2□□□□□ -2.22
CHD1-201ENST00000284049 CDKN2A-AS1Q9UH64 79 aa1.19□□□□□ -2.22
CHD1-201ENST00000284049 IGLV5-48A0A075B6I7 105 aa1.19□□□□□ -2.22
CHD1-201ENST00000284049 SRRM2Q9UQ35 2752 aaKnown RBP1.19□□□□□ -2.22
CHD1-201ENST00000284049 NDUFA1O15239 70 aa1.19□□□□□ -2.22
CHD1-201ENST00000284049 LINC00158P58513 81 aa1.18□□□□□ -2.22
CHD1-201ENST00000284049 KRTAP10-1P60331 282 aa1.18□□□□□ -2.22
CHD1-201ENST00000284049 KRTAP4-7Q9BYR0 210 aa1.18□□□□□ -2.22
CHD1-201ENST00000284049 TNXBP22105 4242 aa1.18□□□□□ -2.22
CHD1-201ENST00000284049 MYCBP2O75592 4640 aa1.18□□□□□ -2.22
CHD1-201ENST00000284049 HERC1Q15751 4861 aa1.18□□□□□ -2.22
CHD1-201ENST00000284049 PRB3Q04118 309 aaPredicted RBP1.18□□□□□ -2.22
CHD1-201ENST00000284049 LINC00959A0A1B0GUT2 108 aa1.17□□□□□ -2.22
CHD1-201ENST00000284049 LCE3EQ5T5B0 92 aa1.17□□□□□ -2.22
CHD1-201ENST00000284049 KRTAP5-3Q6L8H2 238 aa1.17□□□□□ -2.22
CHD1-201ENST00000284049 HMCN1Q96RW7 5635 aa1.16□□□□□ -2.22
CHD1-201ENST00000284049 DEFB135Q30KP9 77 aa1.16□□□□□ -2.22
CHD1-201ENST00000284049 NOP10Q9NPE3 64 aaKnown RBP1.15□□□□□ -2.23
CHD1-201ENST00000284049 MT1HL1P0DM35 61 aa1.15□□□□□ -2.23
CHD1-201ENST00000284049 DEFB1P60022 68 aa1.14□□□□□ -2.23
CHD1-201ENST00000284049 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
CHD1-201ENST00000284049 RPL39LQ96EH5 51 aaKnown RBP1.14□□□□□ -2.23
CHD1-201ENST00000284049 KRTAP10-10P60014 251 aa1.13□□□□□ -2.23
CHD1-201ENST00000284049 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
CHD1-201ENST00000284049 APELAP0DMC3 54 aa1.13□□□□□ -2.23
CHD1-201ENST00000284049 Q5VSD8 79 aa1.13□□□□□ -2.23
CHD1-201ENST00000284049 WFDC10BQ8IUB3 73 aa1.13□□□□□ -2.23
CHD1-201ENST00000284049 MRPL34Q9BQ48 92 aaKnown RBP1.13□□□□□ -2.23
CHD1-201ENST00000284049 C6orf48Q9UBA6 75 aa1.13□□□□□ -2.23
CHD1-201ENST00000284049 KRTAP19-2Q3LHN2 52 aa1.12□□□□□ -2.23
CHD1-201ENST00000284049 KRTAP12-3P60328 96 aa1.12□□□□□ -2.23
CHD1-201ENST00000284049 KRTAP10-5P60370 271 aa1.12□□□□□ -2.23
CHD1-201ENST00000284049 SPINK6Q6UWN8 80 aa1.12□□□□□ -2.23
CHD1-201ENST00000284049 LINC00308Q8TCZ7 52 aa1.11□□□□□ -2.23
CHD1-201ENST00000284049 MUC17Q685J3 4493 aa1.11□□□□□ -2.23
CHD1-201ENST00000284049 RNF213Q63HN8 5207 aa1.11□□□□□ -2.23
CHD1-201ENST00000284049 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.11□□□□□ -2.23
CHD1-201ENST00000284049 RPL39P62891 51 aaKnown RBP1.1□□□□□ -2.23
CHD1-201ENST00000284049 LCE1EQ5T753 118 aa1.1□□□□□ -2.23
CHD1-201ENST00000284049 KRTAP10-7P60409 375 aaPredicted RBP1.1□□□□□ -2.23
CHD1-201ENST00000284049 UBR4Q5T4S7 5183 aa1.1□□□□□ -2.23
CHD1-201ENST00000284049 DEFB105AQ8NG35 78 aa1.09□□□□□ -2.23
CHD1-201ENST00000284049 SPINK1P00995 79 aa1.08□□□□□ -2.24
CHD1-201ENST00000284049 DEFB130BP0DP73 79 aa1.08□□□□□ -2.24
CHD1-201ENST00000284049 DEFB130AP0DP74 79 aa1.08□□□□□ -2.24
CHD1-201ENST00000284049 A0A096LNI7 61 aa1.08□□□□□ -2.24
CHD1-201ENST00000284049 LRP1Q07954 4544 aaKnown RBP1.08□□□□□ -2.24
CHD1-201ENST00000284049 FAT4Q6V0I7 4981 aa1.07□□□□□ -2.24
CHD1-201ENST00000284049 LCE3DQ9BYE3 92 aa1.07□□□□□ -2.24
CHD1-201ENST00000284049 LRP2P98164 4655 aa1.06□□□□□ -2.24
CHD1-201ENST00000284049 DEFB104AQ8WTQ1 72 aa1.06□□□□□ -2.24
CHD1-201ENST00000284049 A0A0D9SG42 100 aa1.05□□□□□ -2.24
CHD1-201ENST00000284049 LCE3AQ5TA76 89 aa1.04□□□□□ -2.24
CHD1-201ENST00000284049 DEFB4AO15263 64 aa1.03□□□□□ -2.24
CHD1-201ENST00000284049 H0YAA0 97 aa1.03□□□□□ -2.25
CHD1-201ENST00000284049 CLPSL2Q6UWE3 100 aa1.02□□□□□ -2.25
CHD1-201ENST00000284049 FLGP20930 4061 aaPredicted RBP1.02□□□□□ -2.25
CHD1-201ENST00000284049 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
CHD1-201ENST00000284049 WFDC13Q8IUB5 93 aa1.02□□□□□ -2.25
CHD1-201ENST00000284049 KRTAP12-4P60329 112 aa1.01□□□□□ -2.25
CHD1-201ENST00000284049 SSPOA2VEC9 5147 aa0.99□□□□□ -2.25
CHD1-201ENST00000284049 MMP24-AS1A0A0U1RRL7 71 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms