RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
SREK1-201ENST00000284041 KRTAP2-4Q9BYR9 128 aa1.45□□□□□ -2.18
SREK1-201ENST00000284041 KRTAP2-1Q9BYU5 128 aa1.45□□□□□ -2.18
SREK1-201ENST00000284041 USP34Q70CQ2 3546 aa1.45□□□□□ -2.18
SREK1-201ENST00000284041 CENPFP49454 3210 aa1.44□□□□□ -2.18
SREK1-201ENST00000284041 ASCC3Q8N3C0 2202 aaKnown RBP1.44□□□□□ -2.18
SREK1-201ENST00000284041 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
SREK1-201ENST00000284041 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
SREK1-201ENST00000284041 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
SREK1-201ENST00000284041 APOBP04114 4563 aaKnown RBP1.44□□□□□ -2.18
SREK1-201ENST00000284041 PRO0255Q9UI72 69 aa1.44□□□□□ -2.18
SREK1-201ENST00000284041 LCE3AQ5TA76 89 aa1.43□□□□□ -2.18
SREK1-201ENST00000284041 U3KQA8 63 aa1.43□□□□□ -2.18
SREK1-201ENST00000284041 VPS13CQ709C8 3753 aa1.42□□□□□ -2.18
SREK1-201ENST00000284041 MKI67P46013 3256 aaKnown RBP1.42□□□□□ -2.18
SREK1-201ENST00000284041 KRTAP10-4P60372 401 aaPredicted RBP1.41□□□□□ -2.18
SREK1-201ENST00000284041 RANBP2P49792 3224 aaKnown RBP1.4□□□□□ -2.19
SREK1-201ENST00000284041 ROS1P08922 2347 aa1.4□□□□□ -2.19
SREK1-201ENST00000284041 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
SREK1-201ENST00000284041 HERC1Q15751 4861 aa1.39□□□□□ -2.19
SREK1-201ENST00000284041 WDFY4Q6ZS81 3184 aa1.39□□□□□ -2.19
SREK1-201ENST00000284041 DYNC1H1Q14204 4646 aaKnown RBP1.39□□□□□ -2.19
SREK1-201ENST00000284041 SMR3AQ99954 134 aa1.38□□□□□ -2.19
SREK1-201ENST00000284041 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
SREK1-201ENST00000284041 UNC80Q8N2C7 3258 aa1.38□□□□□ -2.19
SREK1-201ENST00000284041 C5orf42Q9H799 3197 aa1.38□□□□□ -2.19
SREK1-201ENST00000284041 LINC01556Q5JQF7 62 aa1.38□□□□□ -2.19
SREK1-201ENST00000284041 DEFB108BQ8NET1 73 aa1.38□□□□□ -2.19
SREK1-201ENST00000284041 LPAP08519 4548 aa1.37□□□□□ -2.19
SREK1-201ENST00000284041 UBR4Q5T4S7 5183 aa1.37□□□□□ -2.19
SREK1-201ENST00000284041 LRBAP50851 2863 aa1.37□□□□□ -2.19
SREK1-201ENST00000284041 APCP25054 2843 aa1.37□□□□□ -2.19
SREK1-201ENST00000284041 VCANP13611 3396 aa1.37□□□□□ -2.19
SREK1-201ENST00000284041 MXRA5Q9NR99 2828 aa1.37□□□□□ -2.19
SREK1-201ENST00000284041 NEBP20929 6669 aa1.36□□□□□ -2.19
SREK1-201ENST00000284041 APLNQ9ULZ1 77 aa1.36□□□□□ -2.19
SREK1-201ENST00000284041 GOLGB1Q14789 3259 aaKnown RBP1.36□□□□□ -2.19
SREK1-201ENST00000284041 CUBNO60494 3623 aa1.36□□□□□ -2.19
SREK1-201ENST00000284041 A0A096LPF7 62 aa1.36□□□□□ -2.19
SREK1-201ENST00000284041 FSIP2Q5CZC0 6907 aa1.35□□□□□ -2.19
SREK1-201ENST00000284041 MAP1AP78559 2803 aaPredicted RBP1.35□□□□□ -2.19
SREK1-201ENST00000284041 COL12A1Q99715 3063 aa1.35□□□□□ -2.19
SREK1-201ENST00000284041 SRCAPQ6ZRS2 3230 aa1.34□□□□□ -2.19
SREK1-201ENST00000284041 PRRC2CQ9Y520 2896 aaKnown RBP1.34□□□□□ -2.19
SREK1-201ENST00000284041 OBSCNQ5VST9 7968 aa1.34□□□□□ -2.2
SREK1-201ENST00000284041 HIVEP1P15822 2718 aa1.34□□□□□ -2.2
SREK1-201ENST00000284041 SRRM2Q9UQ35 2752 aaKnown RBP1.34□□□□□ -2.2
SREK1-201ENST00000284041 BRCA2P51587 3418 aa1.34□□□□□ -2.2
SREK1-201ENST00000284041 DCHS1Q96JQ0 3298 aa1.33□□□□□ -2.2
SREK1-201ENST00000284041 FRYLO94915 3013 aa1.33□□□□□ -2.2
SREK1-201ENST00000284041 DEFB136Q30KP8 78 aa1.33□□□□□ -2.2
SREK1-201ENST00000284041 ITPR2Q14571 2701 aa1.33□□□□□ -2.2
SREK1-201ENST00000284041 A0A0D9SG42 100 aa1.32□□□□□ -2.2
SREK1-201ENST00000284041 KRTAP5-9P26371 169 aa1.32□□□□□ -2.2
SREK1-201ENST00000284041 PCLOQ9Y6V0 5065 aa1.32□□□□□ -2.2
SREK1-201ENST00000284041 DNAH14Q0VDD8 3507 aa1.32□□□□□ -2.2
SREK1-201ENST00000284041 RYR1P21817 5038 aa1.32□□□□□ -2.2
SREK1-201ENST00000284041 EP400Q96L91 3159 aa1.32□□□□□ -2.2
SREK1-201ENST00000284041 FBN2P35556 2912 aa1.31□□□□□ -2.2
SREK1-201ENST00000284041 ZANQ9Y493 2812 aa1.3□□□□□ -2.2
SREK1-201ENST00000284041 DSPP15924 2871 aaKnown RBP1.3□□□□□ -2.2
SREK1-201ENST00000284041 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
SREK1-201ENST00000284041 SVEP1Q4LDE5 3571 aa1.3□□□□□ -2.2
SREK1-201ENST00000284041 SPINK1P00995 79 aa1.3□□□□□ -2.2
SREK1-201ENST00000284041 RYR2Q92736 4967 aa1.29□□□□□ -2.2
SREK1-201ENST00000284041 DNAH12Q6ZR08 3092 aa1.29□□□□□ -2.2
SREK1-201ENST00000284041 FRYQ5TBA9 3013 aa1.29□□□□□ -2.2
SREK1-201ENST00000284041 A0A096LNI7 61 aa1.28□□□□□ -2.2
SREK1-201ENST00000284041 RYR3Q15413 4870 aa1.28□□□□□ -2.2
SREK1-201ENST00000284041 FREM2Q5SZK8 3169 aa1.28□□□□□ -2.2
SREK1-201ENST00000284041 FAT1Q14517 4588 aa1.28□□□□□ -2.2
SREK1-201ENST00000284041 KRTAP8-1Q8IUC2 63 aa1.28□□□□□ -2.2
SREK1-201ENST00000284041 LAMA2P24043 3122 aaKnown RBP1.28□□□□□ -2.2
SREK1-201ENST00000284041 CSMD1Q96PZ7 3565 aa1.27□□□□□ -2.21
SREK1-201ENST00000284041 VPS13AQ96RL7 3174 aa1.27□□□□□ -2.21
SREK1-201ENST00000284041 LRP1BQ9NZR2 4599 aa1.27□□□□□ -2.21
SREK1-201ENST00000284041 MUC17Q685J3 4493 aa1.26□□□□□ -2.21
SREK1-201ENST00000284041 CSMD2Q7Z408 3487 aa1.26□□□□□ -2.21
SREK1-201ENST00000284041 CRYBG3Q68DQ2 2970 aa1.26□□□□□ -2.21
SREK1-201ENST00000284041 HTN1P15515 57 aa1.26□□□□□ -2.21
SREK1-201ENST00000284041 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
SREK1-201ENST00000284041 LOC400499M0QZD8 3231 aa1.25□□□□□ -2.21
SREK1-201ENST00000284041 C9orf92A6NGG3 77 aa1.25□□□□□ -2.21
SREK1-201ENST00000284041 PRUNE2Q8WUY3 3088 aa1.25□□□□□ -2.21
SREK1-201ENST00000284041 NIPBLQ6KC79 2804 aaeCLIP1.25□□□□□ -2.212e-7■■■□□ 16.7
SREK1-201ENST00000284041 DEFB133Q30KQ1 61 aa1.25□□□□□ -2.21
SREK1-201ENST00000284041 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
SREK1-201ENST00000284041 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
SREK1-201ENST00000284041 KMT2DO14686 5537 aa1.24□□□□□ -2.21
SREK1-201ENST00000284041 TACC2O95359 2948 aa1.24□□□□□ -2.21
SREK1-201ENST00000284041 DMXL1Q9Y485 3027 aa1.23□□□□□ -2.21
SREK1-201ENST00000284041 XIRP2A4UGR9 3374 aa1.23□□□□□ -2.21
SREK1-201ENST00000284041 SPEGQ15772 3267 aa1.23□□□□□ -2.21
SREK1-201ENST00000284041 STARD9Q9P2P6 4700 aa1.23□□□□□ -2.21
SREK1-201ENST00000284041 CELSR3Q9NYQ7 3312 aa1.23□□□□□ -2.21
SREK1-201ENST00000284041 COL7A1Q02388 2944 aa1.22□□□□□ -2.21
SREK1-201ENST00000284041 KRTAP5-4Q6L8H1 288 aa1.22□□□□□ -2.21
SREK1-201ENST00000284041 TNP1P09430 55 aa1.21□□□□□ -2.22
SREK1-201ENST00000284041 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
SREK1-201ENST00000284041 MYO15AQ9UKN7 3530 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms