RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.23
LPCAT1-201ENST00000283415 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.24
LPCAT1-201ENST00000283415 A8MUU9 505 aa7.33□□□□□ -1.24
LPCAT1-201ENST00000283415 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
LPCAT1-201ENST00000283415 S4R3F8 94 aa7.29□□□□□ -1.24
LPCAT1-201ENST00000283415 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.24
LPCAT1-201ENST00000283415 LRP1Q07954 4544 aaKnown RBP7.27□□□□□ -1.25
LPCAT1-201ENST00000283415 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
LPCAT1-201ENST00000283415 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
LPCAT1-201ENST00000283415 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
LPCAT1-201ENST00000283415 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
LPCAT1-201ENST00000283415 ROMO1P60602 79 aa7.2□□□□□ -1.26
LPCAT1-201ENST00000283415 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
LPCAT1-201ENST00000283415 XP32Q5T750 250 aa7.16□□□□□ -1.26
LPCAT1-201ENST00000283415 RYR3Q15413 4870 aa7.15□□□□□ -1.26
LPCAT1-201ENST00000283415 RYR1P21817 5038 aa7.13□□□□□ -1.27
LPCAT1-201ENST00000283415 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
LPCAT1-201ENST00000283415 P0C880 135 aa7.08□□□□□ -1.28
LPCAT1-201ENST00000283415 KRTAP17-1Q9BYP8 105 aa7.06□□□□□ -1.28
LPCAT1-201ENST00000283415 M0QZ58 72 aa7.05□□□□□ -1.28
LPCAT1-201ENST00000283415 R4GN34 69 aa7.05□□□□□ -1.28
LPCAT1-201ENST00000283415 KIAA1109Q2LD37 5005 aa7.03□□□□□ -1.28
LPCAT1-201ENST00000283415 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
LPCAT1-201ENST00000283415 LPAP08519 4548 aa6.97□□□□□ -1.29
LPCAT1-201ENST00000283415 NDUFAF8A1L188 74 aa6.96□□□□□ -1.3
LPCAT1-201ENST00000283415 M0R2T5 61 aa6.96□□□□□ -1.3
LPCAT1-201ENST00000283415 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
LPCAT1-201ENST00000283415 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
LPCAT1-201ENST00000283415 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
LPCAT1-201ENST00000283415 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.3
LPCAT1-201ENST00000283415 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
LPCAT1-201ENST00000283415 KRTAP4-5Q9BYR2 181 aa6.89□□□□□ -1.31
LPCAT1-201ENST00000283415 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
LPCAT1-201ENST00000283415 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
LPCAT1-201ENST00000283415 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
LPCAT1-201ENST00000283415 EPPK1P58107 5090 aaKnown RBP6.82□□□□□ -1.32
LPCAT1-201ENST00000283415 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
LPCAT1-201ENST00000283415 LRP2P98164 4655 aa6.78□□□□□ -1.32
LPCAT1-201ENST00000283415 MUC17Q685J3 4493 aa6.77□□□□□ -1.33
LPCAT1-201ENST00000283415 LUZP6Q538Z0 58 aa6.77□□□□□ -1.33
LPCAT1-201ENST00000283415 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
LPCAT1-201ENST00000283415 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
LPCAT1-201ENST00000283415 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
LPCAT1-201ENST00000283415 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
LPCAT1-201ENST00000283415 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.38
LPCAT1-201ENST00000283415 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
LPCAT1-201ENST00000283415 BIRC6Q9NR09 4857 aa6.4□□□□□ -1.39
LPCAT1-201ENST00000283415 HERC2O95714 4834 aa6.39□□□□□ -1.39
LPCAT1-201ENST00000283415 MUC2Q02817 5179 aa6.34□□□□□ -1.39
LPCAT1-201ENST00000283415 TNP1P09430 55 aa6.33□□□□□ -1.4
LPCAT1-201ENST00000283415 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
LPCAT1-201ENST00000283415 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
LPCAT1-201ENST00000283415 HERC1Q15751 4861 aa6.25□□□□□ -1.41
LPCAT1-201ENST00000283415 HMCN2Q8NDA2 5059 aa6.17□□□□□ -1.42
LPCAT1-201ENST00000283415 PCLOQ9Y6V0 5065 aa6.16□□□□□ -1.42
LPCAT1-201ENST00000283415 PP632Q6XCG6 107 aa6.15□□□□□ -1.43
LPCAT1-201ENST00000283415 RNF213Q63HN8 5207 aa6.13□□□□□ -1.43
LPCAT1-201ENST00000283415 FAT4Q6V0I7 4981 aa6.08□□□□□ -1.44
LPCAT1-201ENST00000283415 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
LPCAT1-201ENST00000283415 UBR4Q5T4S7 5183 aa5.91□□□□□ -1.46
LPCAT1-201ENST00000283415 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
LPCAT1-201ENST00000283415 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
LPCAT1-201ENST00000283415 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
LPCAT1-201ENST00000283415 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
LPCAT1-201ENST00000283415 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
LPCAT1-201ENST00000283415 MT1HP80294 61 aa5.75□□□□□ -1.49
LPCAT1-201ENST00000283415 MT1FP04733 61 aa5.72□□□□□ -1.49
LPCAT1-201ENST00000283415 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
LPCAT1-201ENST00000283415 MT2AP02795 61 aa5.69□□□□□ -1.5
LPCAT1-201ENST00000283415 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
LPCAT1-201ENST00000283415 PRO2289Q9P1D8 64 aa5.63□□□□□ -1.51
LPCAT1-201ENST00000283415 KRTAP19-8Q3LI54 63 aa5.63□□□□□ -1.51
LPCAT1-201ENST00000283415 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
LPCAT1-201ENST00000283415 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
LPCAT1-201ENST00000283415 MT1BP07438 61 aa5.51□□□□□ -1.53
LPCAT1-201ENST00000283415 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
LPCAT1-201ENST00000283415 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
LPCAT1-201ENST00000283415 USH2AO75445 5202 aa5.48□□□□□ -1.53
LPCAT1-201ENST00000283415 MT1XP80297 61 aa5.46□□□□□ -1.54
LPCAT1-201ENST00000283415 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
LPCAT1-201ENST00000283415 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
LPCAT1-201ENST00000283415 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.55
LPCAT1-201ENST00000283415 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
LPCAT1-201ENST00000283415 KMT2DO14686 5537 aa5.32□□□□□ -1.56
LPCAT1-201ENST00000283415 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
LPCAT1-201ENST00000283415 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
LPCAT1-201ENST00000283415 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
LPCAT1-201ENST00000283415 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
LPCAT1-201ENST00000283415 LCE2BO14633 110 aa5.19□□□□□ -1.58
LPCAT1-201ENST00000283415 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
LPCAT1-201ENST00000283415 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
LPCAT1-201ENST00000283415 INE1O15225 51 aa5.13□□□□□ -1.59
LPCAT1-201ENST00000283415 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
LPCAT1-201ENST00000283415 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
LPCAT1-201ENST00000283415 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
LPCAT1-201ENST00000283415 SSPOA2VEC9 5147 aa4.92□□□□□ -1.62
LPCAT1-201ENST00000283415 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
LPCAT1-201ENST00000283415 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.64
LPCAT1-201ENST00000283415 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
LPCAT1-201ENST00000283415 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms