RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 ZNF469Q96JG9 3925 aaPredicted RBP5.24□□□□□ -1.57
SMARCA5-201ENST00000283131 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
SMARCA5-201ENST00000283131 AKAP9Q99996 3911 aa5.21□□□□□ -1.58
SMARCA5-201ENST00000283131 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
SMARCA5-201ENST00000283131 KRTAP10-4P60372 401 aaPredicted RBP5.08□□□□□ -1.6
SMARCA5-201ENST00000283131 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
SMARCA5-201ENST00000283131 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
SMARCA5-201ENST00000283131 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
SMARCA5-201ENST00000283131 SPRR2EP22531 72 aa4.94□□□□□ -1.62
SMARCA5-201ENST00000283131 SPRR2BP35325 72 aa4.94□□□□□ -1.62
SMARCA5-201ENST00000283131 SPRR2AP35326 72 aa4.94□□□□□ -1.62
SMARCA5-201ENST00000283131 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
SMARCA5-201ENST00000283131 MT1HP80294 61 aa4.92□□□□□ -1.62
SMARCA5-201ENST00000283131 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
SMARCA5-201ENST00000283131 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
SMARCA5-201ENST00000283131 LYSTQ99698 3801 aa4.88□□□□□ -1.63
SMARCA5-201ENST00000283131 ANK3Q12955 4377 aaKnown RBP4.86□□□□□ -1.63
SMARCA5-201ENST00000283131 CMYA5Q8N3K9 4069 aa4.86□□□□□ -1.63
SMARCA5-201ENST00000283131 MT2AP02795 61 aa4.84□□□□□ -1.63
SMARCA5-201ENST00000283131 SPRR2DP22532 72 aa4.79□□□□□ -1.64
SMARCA5-201ENST00000283131 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.64
SMARCA5-201ENST00000283131 LCE2BO14633 110 aa4.77□□□□□ -1.65
SMARCA5-201ENST00000283131 KMT2AQ03164 3969 aa4.72□□□□□ -1.65
SMARCA5-201ENST00000283131 HUWE1Q7Z6Z7 4374 aaKnown RBP4.71□□□□□ -1.66
SMARCA5-201ENST00000283131 DNAH7Q8WXX0 4024 aa4.71□□□□□ -1.66
SMARCA5-201ENST00000283131 MT1FP04733 61 aa4.69□□□□□ -1.66
SMARCA5-201ENST00000283131 KRTAP4-1Q9BYQ7 146 aa4.69□□□□□ -1.66
SMARCA5-201ENST00000283131 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
SMARCA5-201ENST00000283131 DNAH1Q9P2D7 4330 aa4.66□□□□□ -1.66
SMARCA5-201ENST00000283131 VPS13BQ7Z7G8 4022 aa4.64□□□□□ -1.67
SMARCA5-201ENST00000283131 MT1GP13640 62 aa4.64□□□□□ -1.67
SMARCA5-201ENST00000283131 DNAH3Q8TD57 4116 aa4.61□□□□□ -1.67
SMARCA5-201ENST00000283131 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
SMARCA5-201ENST00000283131 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
SMARCA5-201ENST00000283131 DNAH2Q9P225 4427 aa4.54□□□□□ -1.68
SMARCA5-201ENST00000283131 LCE2CQ5TA81 110 aa4.53□□□□□ -1.68
SMARCA5-201ENST00000283131 ANK2Q01484 3957 aa4.53□□□□□ -1.68
SMARCA5-201ENST00000283131 PRKDCP78527 4128 aaKnown RBP4.46□□□□□ -1.69
SMARCA5-201ENST00000283131 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
SMARCA5-201ENST00000283131 DNAH6Q9C0G6 4158 aa4.42□□□□□ -1.7
SMARCA5-201ENST00000283131 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
SMARCA5-201ENST00000283131 KRTAP19-8Q3LI54 63 aa4.38□□□□□ -1.71
SMARCA5-201ENST00000283131 MT3P25713 68 aa4.33□□□□□ -1.72
SMARCA5-201ENST00000283131 DNAH9Q9NYC9 4486 aa4.32□□□□□ -1.72
SMARCA5-201ENST00000283131 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
SMARCA5-201ENST00000283131 MT1XP80297 61 aa4.31□□□□□ -1.72
SMARCA5-201ENST00000283131 FAT2Q9NYQ8 4349 aa4.28□□□□□ -1.72
SMARCA5-201ENST00000283131 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
SMARCA5-201ENST00000283131 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
SMARCA5-201ENST00000283131 DNAH10Q8IVF4 4471 aa4.27□□□□□ -1.73
SMARCA5-201ENST00000283131 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
SMARCA5-201ENST00000283131 MT4P47944 62 aa4.26□□□□□ -1.73
SMARCA5-201ENST00000283131 PRM1P04553 51 aa4.25□□□□□ -1.73
SMARCA5-201ENST00000283131 FAT1Q14517 4588 aa4.23□□□□□ -1.73
SMARCA5-201ENST00000283131 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
SMARCA5-201ENST00000283131 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
SMARCA5-201ENST00000283131 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
SMARCA5-201ENST00000283131 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
SMARCA5-201ENST00000283131 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
SMARCA5-201ENST00000283131 MT1LQ93083 61 aa4.18□□□□□ -1.74
SMARCA5-201ENST00000283131 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
SMARCA5-201ENST00000283131 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
SMARCA5-201ENST00000283131 DNAH11Q96DT5 4516 aa4.14□□□□□ -1.75
SMARCA5-201ENST00000283131 MT1BP07438 61 aa4.12□□□□□ -1.75
SMARCA5-201ENST00000283131 PKHD1P08F94 4074 aa4.09□□□□□ -1.75
SMARCA5-201ENST00000283131 DNAH5Q8TE73 4624 aa4.06□□□□□ -1.76
SMARCA5-201ENST00000283131 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
SMARCA5-201ENST00000283131 PLECQ15149 4684 aaKnown RBP4.04□□□□□ -1.76
SMARCA5-201ENST00000283131 DYNC2H1Q8NCM8 4307 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-201ENST00000283131 VPS13DQ5THJ4 4388 aa4.03□□□□□ -1.76
SMARCA5-201ENST00000283131 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
SMARCA5-201ENST00000283131 STARD9Q9P2P6 4700 aa3.99□□□□□ -1.77
SMARCA5-201ENST00000283131 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
SMARCA5-201ENST00000283131 MT1EP04732 61 aa3.97□□□□□ -1.77
SMARCA5-201ENST00000283131 KRTAP9-3Q9BYQ3 159 aa3.95□□□□□ -1.78
SMARCA5-201ENST00000283131 FAT3Q8TDW7 4589 aa3.94□□□□□ -1.78
SMARCA5-201ENST00000283131 MT1MQ8N339 61 aa3.91□□□□□ -1.78
SMARCA5-201ENST00000283131 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
SMARCA5-201ENST00000283131 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
SMARCA5-201ENST00000283131 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
SMARCA5-201ENST00000283131 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
SMARCA5-201ENST00000283131 APOBP04114 4563 aaKnown RBP3.86□□□□□ -1.79
SMARCA5-201ENST00000283131 PKHD1L1Q86WI1 4243 aa3.85□□□□□ -1.79
SMARCA5-201ENST00000283131 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
SMARCA5-201ENST00000283131 KRTAP17-1Q9BYP8 105 aa3.84□□□□□ -1.79
SMARCA5-201ENST00000283131 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
SMARCA5-201ENST00000283131 SACSQ9NZJ4 4579 aa3.79□□□□□ -1.8
SMARCA5-201ENST00000283131 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
SMARCA5-201ENST00000283131 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
SMARCA5-201ENST00000283131 DYNC1H1Q14204 4646 aaKnown RBP3.72□□□□□ -1.81
SMARCA5-201ENST00000283131 PKD1P98161 4303 aa3.71□□□□□ -1.82
SMARCA5-201ENST00000283131 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
SMARCA5-201ENST00000283131 MYCBP2O75592 4640 aa3.71□□□□□ -1.82
SMARCA5-201ENST00000283131 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
SMARCA5-201ENST00000283131 MT1AP04731 61 aa3.7□□□□□ -1.82
SMARCA5-201ENST00000283131 HSPG2P98160 4391 aa3.69□□□□□ -1.82
SMARCA5-201ENST00000283131 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
SMARCA5-201ENST00000283131 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
SMARCA5-201ENST00000283131 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
SMARCA5-201ENST00000283131 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms