RNA–Protein interactions for RNA: ENST00000281043.3

MYCN-201, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MYCN, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-201ENST00000281043 SPINT4Q6UDR6 99 aa11.24□□□□□ -0.61
MYCN-201ENST00000281043 TPRXLQ17RH7 258 aa11.21□□□□□ -0.61
MYCN-201ENST00000281043 RYR3Q15413 4870 aa11.2□□□□□ -0.62
MYCN-201ENST00000281043 PKHD1L1Q86WI1 4243 aa11.18□□□□□ -0.62
MYCN-201ENST00000281043 LRP1Q07954 4544 aaKnown RBP11.15□□□□□ -0.62
MYCN-201ENST00000281043 KRTAP10-6P60371 365 aaPredicted RBP11.14□□□□□ -0.63
MYCN-201ENST00000281043 KRTAP13-4Q3LI77 160 aa11.13□□□□□ -0.63
MYCN-201ENST00000281043 A0A0D9SG42 100 aa11.13□□□□□ -0.63
MYCN-201ENST00000281043 HSPG2P98160 4391 aa11.08□□□□□ -0.64
MYCN-201ENST00000281043 C10orf95Q9H7T3 257 aa11.06□□□□□ -0.64
MYCN-201ENST00000281043 KRTAP15-1Q3LI76 137 aa11.03□□□□□ -0.64
MYCN-201ENST00000281043 KRTAP3-3Q9BYR6 98 aa11.03□□□□□ -0.64
MYCN-201ENST00000281043 DMBT1Q9UGM3 2413 aaPredicted RBP11.02□□□□□ -0.64
MYCN-201ENST00000281043 NDUFAF8A1L188 74 aa11.01□□□□□ -0.65
MYCN-201ENST00000281043 KRTAP3-2Q9BYR7 98 aa11□□□□□ -0.65
MYCN-201ENST00000281043 TNXBP22105 4242 aa10.96□□□□□ -0.66
MYCN-201ENST00000281043 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
MYCN-201ENST00000281043 KIAA1109Q2LD37 5005 aa10.93□□□□□ -0.66
MYCN-201ENST00000281043 RYR1P21817 5038 aa10.92□□□□□ -0.66
MYCN-201ENST00000281043 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
MYCN-201ENST00000281043 Q5VSD8 79 aa10.9□□□□□ -0.66
MYCN-201ENST00000281043 S4R3F8 94 aa10.9□□□□□ -0.66
MYCN-201ENST00000281043 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
MYCN-201ENST00000281043 KRTAP12-2P59991 146 aa10.83□□□□□ -0.68
MYCN-201ENST00000281043 EPPK1P58107 5090 aaKnown RBP10.81□□□□□ -0.68
MYCN-201ENST00000281043 KRTAP10-8P60410 259 aa10.78□□□□□ -0.68
MYCN-201ENST00000281043 KRTAP12-1P59990 96 aa10.7□□□□□ -0.7
MYCN-201ENST00000281043 XP32Q5T750 250 aa10.67□□□□□ -0.7
MYCN-201ENST00000281043 MT1HL1P0DM35 61 aa10.57□□□□□ -0.72
MYCN-201ENST00000281043 M0QZ58 72 aa10.48□□□□□ -0.73
MYCN-201ENST00000281043 LPAP08519 4548 aa10.47□□□□□ -0.73
MYCN-201ENST00000281043 KRTAP4-5Q9BYR2 181 aa10.46□□□□□ -0.74
MYCN-201ENST00000281043 ABCA13Q86UQ4 5058 aa10.44□□□□□ -0.74
MYCN-201ENST00000281043 LRP2P98164 4655 aa10.42□□□□□ -0.74
MYCN-201ENST00000281043 BIRC6Q9NR09 4857 aa10.28□□□□□ -0.76
MYCN-201ENST00000281043 PLAC4Q8WY50 150 aa10.25□□□□□ -0.77
MYCN-201ENST00000281043 A0A0A0MQY5 61 aa10.22□□□□□ -0.77
MYCN-201ENST00000281043 HERC2O95714 4834 aa10.16□□□□□ -0.78
MYCN-201ENST00000281043 LUZP6Q538Z0 58 aa10.15□□□□□ -0.78
MYCN-201ENST00000281043 R4GN34 69 aa10.13□□□□□ -0.79
MYCN-201ENST00000281043 J3QL48 77 aa9.96□□□□□ -0.82
MYCN-201ENST00000281043 LORP23490 312 aaPredicted RBP9.91□□□□□ -0.82
MYCN-201ENST00000281043 PP632Q6XCG6 107 aa9.86□□□□□ -0.83
MYCN-201ENST00000281043 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
MYCN-201ENST00000281043 PCLOQ9Y6V0 5065 aa9.86□□□□□ -0.83
MYCN-201ENST00000281043 MUC2Q02817 5179 aa9.83□□□□□ -0.84
MYCN-201ENST00000281043 KRTAP4-1Q9BYQ7 146 aa9.83□□□□□ -0.84
MYCN-201ENST00000281043 HERC1Q15751 4861 aa9.78□□□□□ -0.84
MYCN-201ENST00000281043 SEC61BP60468 96 aaKnown RBP9.75□□□□□ -0.85
MYCN-201ENST00000281043 CAMK2N1Q7Z7J9 78 aa9.68□□□□□ -0.86
MYCN-201ENST00000281043 HMCN2Q8NDA2 5059 aa9.54□□□□□ -0.88
MYCN-201ENST00000281043 KRTAP19-2Q3LHN2 52 aa9.53□□□□□ -0.88
MYCN-201ENST00000281043 SPRR5A0A1B0GTR4 108 aa9.43□□□□□ -0.9
MYCN-201ENST00000281043 TNP1P09430 55 aa9.37□□□□□ -0.91
MYCN-201ENST00000281043 FAT4Q6V0I7 4981 aa9.37□□□□□ -0.91
MYCN-201ENST00000281043 KRTAP23-1A1A580 65 aa9.36□□□□□ -0.91
MYCN-201ENST00000281043 FLGP20930 4061 aaPredicted RBP9.34□□□□□ -0.91
MYCN-201ENST00000281043 RNF213Q63HN8 5207 aa9.27□□□□□ -0.93
MYCN-201ENST00000281043 UBR4Q5T4S7 5183 aa9.26□□□□□ -0.93
MYCN-201ENST00000281043 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
MYCN-201ENST00000281043 PRO2289Q9P1D8 64 aa9.01□□□□□ -0.97
MYCN-201ENST00000281043 M0R2T5 61 aa8.89□□□□□ -0.99
MYCN-201ENST00000281043 MT1HP80294 61 aa8.87□□□□□ -0.99
MYCN-201ENST00000281043 LCE3AQ5TA76 89 aa8.82□□□□□ -1
MYCN-201ENST00000281043 INE1O15225 51 aa8.81□□□□□ -1
MYCN-201ENST00000281043 SPRR2GQ9BYE4 73 aa8.81□□□□□ -1
MYCN-201ENST00000281043 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
MYCN-201ENST00000281043 MT1FP04733 61 aa8.67□□□□□ -1.02
MYCN-201ENST00000281043 MT2AP02795 61 aa8.66□□□□□ -1.02
MYCN-201ENST00000281043 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
MYCN-201ENST00000281043 KRTAP9-8Q9BYQ0 159 aa8.62□□□□□ -1.03
MYCN-201ENST00000281043 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
MYCN-201ENST00000281043 KRTAP12-3P60328 96 aa8.36□□□□□ -1.07
MYCN-201ENST00000281043 KRTAP19-8Q3LI54 63 aa8.32□□□□□ -1.08
MYCN-201ENST00000281043 KRTAP10-5P60370 271 aa8.31□□□□□ -1.08
MYCN-201ENST00000281043 KRTAP10-12P60413 245 aa8.3□□□□□ -1.08
MYCN-201ENST00000281043 MT1BP07438 61 aa8.29□□□□□ -1.08
MYCN-201ENST00000281043 MT1XP80297 61 aa8.28□□□□□ -1.08
MYCN-201ENST00000281043 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
MYCN-201ENST00000281043 USH2AO75445 5202 aa8.17□□□□□ -1.1
MYCN-201ENST00000281043 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
MYCN-201ENST00000281043 KRTAP10-7P60409 375 aaPredicted RBP8.12□□□□□ -1.11
MYCN-201ENST00000281043 LCE2BO14633 110 aa8.04□□□□□ -1.12
MYCN-201ENST00000281043 LCE3CQ5T5A8 94 aa7.9□□□□□ -1.15
MYCN-201ENST00000281043 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
MYCN-201ENST00000281043 KMT2DO14686 5537 aa7.84□□□□□ -1.15
MYCN-201ENST00000281043 KRTAP9-6A8MVA2 160 aa7.68□□□□□ -1.18
MYCN-201ENST00000281043 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
MYCN-201ENST00000281043 KRTAP2-3P0C7H8 128 aa7.63□□□□□ -1.19
MYCN-201ENST00000281043 KRTAP2-4Q9BYR9 128 aa7.63□□□□□ -1.19
MYCN-201ENST00000281043 KRTAP2-1Q9BYU5 128 aa7.63□□□□□ -1.19
MYCN-201ENST00000281043 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
MYCN-201ENST00000281043 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
MYCN-201ENST00000281043 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
MYCN-201ENST00000281043 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
MYCN-201ENST00000281043 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
MYCN-201ENST00000281043 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
MYCN-201ENST00000281043 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
MYCN-201ENST00000281043 KRTAP9-2Q9BYQ4 174 aa7.23□□□□□ -1.25
MYCN-201ENST00000281043 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms