RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.93
LIN7C-201ENST00000278193 COL7A1Q02388 2944 aa2.96□□□□□ -1.94
LIN7C-201ENST00000278193 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
LIN7C-201ENST00000278193 DNAH3Q8TD57 4116 aa2.92□□□□□ -1.94
LIN7C-201ENST00000278193 M0QZ58 72 aa2.92□□□□□ -1.94
LIN7C-201ENST00000278193 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
LIN7C-201ENST00000278193 KRTAP12-1P59990 96 aa2.89□□□□□ -1.95
LIN7C-201ENST00000278193 EPPK1P58107 5090 aaKnown RBP2.89□□□□□ -1.95
LIN7C-201ENST00000278193 LYSTQ99698 3801 aa2.88□□□□□ -1.95
LIN7C-201ENST00000278193 DYNC2H1Q8NCM8 4307 aaKnown RBP2.88□□□□□ -1.95
LIN7C-201ENST00000278193 DNAH9Q9NYC9 4486 aa2.87□□□□□ -1.95
LIN7C-201ENST00000278193 DNAH1Q9P2D7 4330 aa2.86□□□□□ -1.95
LIN7C-201ENST00000278193 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
LIN7C-201ENST00000278193 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
LIN7C-201ENST00000278193 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
LIN7C-201ENST00000278193 RYR2Q92736 4967 aa2.84□□□□□ -1.95
LIN7C-201ENST00000278193 HUWE1Q7Z6Z7 4374 aaKnown RBP2.84□□□□□ -1.95
LIN7C-201ENST00000278193 KRTAP4-5Q9BYR2 181 aa2.84□□□□□ -1.95
LIN7C-201ENST00000278193 DNAH7Q8WXX0 4024 aa2.83□□□□□ -1.96
LIN7C-201ENST00000278193 ALMS1Q8TCU4 4167 aa2.82□□□□□ -1.96
LIN7C-201ENST00000278193 STARD9Q9P2P6 4700 aa2.82□□□□□ -1.96
LIN7C-201ENST00000278193 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
LIN7C-201ENST00000278193 SACSQ9NZJ4 4579 aa2.81□□□□□ -1.96
LIN7C-201ENST00000278193 FRAS1Q86XX4 4008 aa2.81□□□□□ -1.96
LIN7C-201ENST00000278193 PCLOQ9Y6V0 5065 aa2.81□□□□□ -1.96
LIN7C-201ENST00000278193 HERC2O95714 4834 aa2.81□□□□□ -1.96
LIN7C-201ENST00000278193 KRTAP10-4P60372 401 aaPredicted RBP2.8□□□□□ -1.96
LIN7C-201ENST00000278193 KMT2AQ03164 3969 aa2.78□□□□□ -1.96
LIN7C-201ENST00000278193 PLECQ15149 4684 aaKnown RBP2.77□□□□□ -1.97
LIN7C-201ENST00000278193 RYR1P21817 5038 aa2.73□□□□□ -1.97
LIN7C-201ENST00000278193 HECTD4Q9Y4D8 3996 aa2.72□□□□□ -1.97
LIN7C-201ENST00000278193 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
LIN7C-201ENST00000278193 VPS13DQ5THJ4 4388 aa2.71□□□□□ -1.98
LIN7C-201ENST00000278193 DNAH11Q96DT5 4516 aa2.71□□□□□ -1.98
LIN7C-201ENST00000278193 SRRM2Q9UQ35 2752 aaKnown RBP2.7□□□□□ -1.98
LIN7C-201ENST00000278193 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
LIN7C-201ENST00000278193 PKHD1P08F94 4074 aa2.69□□□□□ -1.98
LIN7C-201ENST00000278193 TNP1P09430 55 aa2.69□□□□□ -1.98
LIN7C-201ENST00000278193 DNAH2Q9P225 4427 aa2.68□□□□□ -1.98
LIN7C-201ENST00000278193 DNAH10Q8IVF4 4471 aa2.67□□□□□ -1.98
LIN7C-201ENST00000278193 KRTAP10-6P60371 365 aaPredicted RBP2.66□□□□□ -1.98
LIN7C-201ENST00000278193 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
LIN7C-201ENST00000278193 KRTAP9-6A0A140TA67 174 aa2.65□□□□□ -1.99
LIN7C-201ENST00000278193 KRTAP9-7A8MTY7 169 aa2.65□□□□□ -1.99
LIN7C-201ENST00000278193 FAT2Q9NYQ8 4349 aa2.64□□□□□ -1.99
LIN7C-201ENST00000278193 DNAH6Q9C0G6 4158 aa2.63□□□□□ -1.99
LIN7C-201ENST00000278193 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
LIN7C-201ENST00000278193 ABCA13Q86UQ4 5058 aa2.62□□□□□ -1.99
LIN7C-201ENST00000278193 PKD1P98161 4303 aa2.61□□□□□ -1.99
LIN7C-201ENST00000278193 KIAA1109Q2LD37 5005 aa2.61□□□□□ -1.99
LIN7C-201ENST00000278193 DNAH5Q8TE73 4624 aa2.6□□□□□ -1.99
LIN7C-201ENST00000278193 LCE4AQ5TA78 99 aa2.57□□□□□ -2
LIN7C-201ENST00000278193 DYNC1H1Q14204 4646 aaKnown RBP2.57□□□□□ -2
LIN7C-201ENST00000278193 DNAH17Q9UFH2 4485 aa2.56□□□□□ -2
LIN7C-201ENST00000278193 HERC1Q15751 4861 aa2.55□□□□□ -2
LIN7C-201ENST00000278193 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
LIN7C-201ENST00000278193 LRP1BQ9NZR2 4599 aa2.55□□□□□ -2
LIN7C-201ENST00000278193 HSPG2P98160 4391 aa2.54□□□□□ -2
LIN7C-201ENST00000278193 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2.01
LIN7C-201ENST00000278193 FAT1Q14517 4588 aa2.52□□□□□ -2.01
LIN7C-201ENST00000278193 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
LIN7C-201ENST00000278193 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
LIN7C-201ENST00000278193 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
LIN7C-201ENST00000278193 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
LIN7C-201ENST00000278193 MT1HP80294 61 aa2.47□□□□□ -2.01
LIN7C-201ENST00000278193 VPS13BQ7Z7G8 4022 aa2.46□□□□□ -2.01
LIN7C-201ENST00000278193 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.02
LIN7C-201ENST00000278193 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
LIN7C-201ENST00000278193 LRP1Q07954 4544 aaKnown RBP2.44□□□□□ -2.02
LIN7C-201ENST00000278193 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
LIN7C-201ENST00000278193 HMCN2Q8NDA2 5059 aa2.42□□□□□ -2.02
LIN7C-201ENST00000278193 KRTAP4-1Q9BYQ7 146 aa2.42□□□□□ -2.02
LIN7C-201ENST00000278193 KRTAP9-3Q9BYQ3 159 aa2.41□□□□□ -2.02
LIN7C-201ENST00000278193 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
LIN7C-201ENST00000278193 MT2AP02795 61 aa2.38□□□□□ -2.03
LIN7C-201ENST00000278193 PKHD1L1Q86WI1 4243 aa2.38□□□□□ -2.03
LIN7C-201ENST00000278193 FAT3Q8TDW7 4589 aa2.37□□□□□ -2.03
LIN7C-201ENST00000278193 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
LIN7C-201ENST00000278193 RNF213Q63HN8 5207 aa2.34□□□□□ -2.03
LIN7C-201ENST00000278193 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
LIN7C-201ENST00000278193 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
LIN7C-201ENST00000278193 TNXBP22105 4242 aa2.32□□□□□ -2.04
LIN7C-201ENST00000278193 LCE1DQ5T752 114 aa2.32□□□□□ -2.04
LIN7C-201ENST00000278193 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
LIN7C-201ENST00000278193 LRP2P98164 4655 aa2.31□□□□□ -2.04
LIN7C-201ENST00000278193 MUC2Q02817 5179 aa2.31□□□□□ -2.04
LIN7C-201ENST00000278193 MT1FP04733 61 aa2.31□□□□□ -2.04
LIN7C-201ENST00000278193 LPAP08519 4548 aa2.3□□□□□ -2.04
LIN7C-201ENST00000278193 SPRR2GQ9BYE4 73 aa2.3□□□□□ -2.04
LIN7C-201ENST00000278193 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
LIN7C-201ENST00000278193 CRCT1Q9UGL9 99 aa2.29□□□□□ -2.04
LIN7C-201ENST00000278193 KRTAP19-1Q8IUB9 90 aa2.27□□□□□ -2.05
LIN7C-201ENST00000278193 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
LIN7C-201ENST00000278193 KRTAP9-2Q9BYQ4 174 aa2.26□□□□□ -2.05
LIN7C-201ENST00000278193 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
LIN7C-201ENST00000278193 KRTAP9-8Q9BYQ0 159 aa2.21□□□□□ -2.05
LIN7C-201ENST00000278193 KRTAP10-5P60370 271 aa2.21□□□□□ -2.06
LIN7C-201ENST00000278193 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
LIN7C-201ENST00000278193 SPRR2EP22531 72 aa2.16□□□□□ -2.06
LIN7C-201ENST00000278193 SPRR2BP35325 72 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms