RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 DMBT1Q9UGM3 2413 aaPredicted RBP12.31□□□□□ -0.44
RETREG2-201ENST00000273048 LRP1Q07954 4544 aaKnown RBP12.28□□□□□ -0.44
RETREG2-201ENST00000273048 KRTAP10-6P60371 365 aaPredicted RBP12.28□□□□□ -0.44
RETREG2-201ENST00000273048 KRTAP3-3Q9BYR6 98 aa12.28□□□□□ -0.44
RETREG2-201ENST00000273048 HSPG2P98160 4391 aa12.27□□□□□ -0.45
RETREG2-201ENST00000273048 ROMO1P60602 79 aa12.26□□□□□ -0.45
RETREG2-201ENST00000273048 KRTAP13-4Q3LI77 160 aa12.25□□□□□ -0.45
RETREG2-201ENST00000273048 A0A0D9SG42 100 aa12.21□□□□□ -0.45
RETREG2-201ENST00000273048 TNXBP22105 4242 aa12.2□□□□□ -0.46
RETREG2-201ENST00000273048 RPL37P61927 97 aaKnown RBP12.18□□□□□ -0.46
RETREG2-201ENST00000273048 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
RETREG2-201ENST00000273048 KRTAP10-8P60410 259 aa12.15□□□□□ -0.46
RETREG2-201ENST00000273048 MYCBP2O75592 4640 aa12.14□□□□□ -0.47
RETREG2-201ENST00000273048 S4R3F8 94 aa12.07□□□□□ -0.48
RETREG2-201ENST00000273048 RYR3Q15413 4870 aa12.07□□□□□ -0.48
RETREG2-201ENST00000273048 P0C880 135 aa12.03□□□□□ -0.48
RETREG2-201ENST00000273048 Q5VSD8 79 aa12.02□□□□□ -0.48
RETREG2-201ENST00000273048 XP32Q5T750 250 aa12.02□□□□□ -0.49
RETREG2-201ENST00000273048 TPRXLQ17RH7 258 aa11.99□□□□□ -0.49
RETREG2-201ENST00000273048 KRTAP17-1Q9BYP8 105 aa11.94□□□□□ -0.5
RETREG2-201ENST00000273048 C10orf95Q9H7T3 257 aa11.93□□□□□ -0.5
RETREG2-201ENST00000273048 RYR1P21817 5038 aa11.91□□□□□ -0.5
RETREG2-201ENST00000273048 KRTAP12-2P59991 146 aa11.87□□□□□ -0.51
RETREG2-201ENST00000273048 KIAA1109Q2LD37 5005 aa11.84□□□□□ -0.51
RETREG2-201ENST00000273048 LPAP08519 4548 aa11.83□□□□□ -0.52
RETREG2-201ENST00000273048 SPINT4Q6UDR6 99 aa11.81□□□□□ -0.52
RETREG2-201ENST00000273048 KRTAP12-1P59990 96 aa11.72□□□□□ -0.53
RETREG2-201ENST00000273048 MT1HL1P0DM35 61 aa11.67□□□□□ -0.54
RETREG2-201ENST00000273048 EPPK1P58107 5090 aaKnown RBP11.65□□□□□ -0.54
RETREG2-201ENST00000273048 LRP2P98164 4655 aa11.65□□□□□ -0.54
RETREG2-201ENST00000273048 KRTAP15-1Q3LI76 137 aa11.53□□□□□ -0.56
RETREG2-201ENST00000273048 M0QZ58 72 aa11.5□□□□□ -0.57
RETREG2-201ENST00000273048 ABCA13Q86UQ4 5058 aa11.45□□□□□ -0.58
RETREG2-201ENST00000273048 NDUFAF8A1L188 74 aa11.42□□□□□ -0.58
RETREG2-201ENST00000273048 KRTAP4-5Q9BYR2 181 aa11.37□□□□□ -0.59
RETREG2-201ENST00000273048 R4GN34 69 aa11.25□□□□□ -0.61
RETREG2-201ENST00000273048 LORP23490 312 aaPredicted RBP11.15□□□□□ -0.62
RETREG2-201ENST00000273048 MUC17Q685J3 4493 aa11.08□□□□□ -0.64
RETREG2-201ENST00000273048 J3QL48 77 aa10.95□□□□□ -0.66
RETREG2-201ENST00000273048 KRTAP4-1Q9BYQ7 146 aa10.94□□□□□ -0.66
RETREG2-201ENST00000273048 HERC2O95714 4834 aa10.93□□□□□ -0.66
RETREG2-201ENST00000273048 SEC61BP60468 96 aaKnown RBP10.9□□□□□ -0.66
RETREG2-201ENST00000273048 PLAC4Q8WY50 150 aa10.89□□□□□ -0.67
RETREG2-201ENST00000273048 BIRC6Q9NR09 4857 aa10.86□□□□□ -0.67
RETREG2-201ENST00000273048 MUC2Q02817 5179 aa10.76□□□□□ -0.69
RETREG2-201ENST00000273048 KRTAP19-2Q3LHN2 52 aa10.72□□□□□ -0.69
RETREG2-201ENST00000273048 CAMK2N1Q7Z7J9 78 aa10.72□□□□□ -0.69
RETREG2-201ENST00000273048 PP632Q6XCG6 107 aa10.59□□□□□ -0.71
RETREG2-201ENST00000273048 PCLOQ9Y6V0 5065 aa10.54□□□□□ -0.72
RETREG2-201ENST00000273048 HERC1Q15751 4861 aa10.5□□□□□ -0.73
RETREG2-201ENST00000273048 FLGP20930 4061 aaPredicted RBP10.49□□□□□ -0.73
RETREG2-201ENST00000273048 LUZP6Q538Z0 58 aa10.42□□□□□ -0.74
RETREG2-201ENST00000273048 HMCN2Q8NDA2 5059 aa10.31□□□□□ -0.76
RETREG2-201ENST00000273048 TNP1P09430 55 aa10.31□□□□□ -0.76
RETREG2-201ENST00000273048 FAT4Q6V0I7 4981 aa10.22□□□□□ -0.77
RETREG2-201ENST00000273048 KRTAP23-1A1A580 65 aa10.11□□□□□ -0.79
RETREG2-201ENST00000273048 A0A0A0MQY5 61 aa10.06□□□□□ -0.8
RETREG2-201ENST00000273048 SPRR5A0A1B0GTR4 108 aa10.04□□□□□ -0.8
RETREG2-201ENST00000273048 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
RETREG2-201ENST00000273048 RNF213Q63HN8 5207 aa10□□□□□ -0.81
RETREG2-201ENST00000273048 UBR4Q5T4S7 5183 aa9.96□□□□□ -0.81
RETREG2-201ENST00000273048 KRTAP19-1Q8IUB9 90 aa9.93□□□□□ -0.82
RETREG2-201ENST00000273048 SPRR2GQ9BYE4 73 aa9.93□□□□□ -0.82
RETREG2-201ENST00000273048 M0R2T5 61 aa9.84□□□□□ -0.83
RETREG2-201ENST00000273048 LCE3AQ5TA76 89 aa9.81□□□□□ -0.84
RETREG2-201ENST00000273048 MT1HP80294 61 aa9.78□□□□□ -0.84
RETREG2-201ENST00000273048 MT1FP04733 61 aa9.64□□□□□ -0.87
RETREG2-201ENST00000273048 KRTAP10-10P60014 251 aa9.62□□□□□ -0.87
RETREG2-201ENST00000273048 MT2AP02795 61 aa9.59□□□□□ -0.87
RETREG2-201ENST00000273048 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
RETREG2-201ENST00000273048 KRTAP8-1Q8IUC2 63 aa9.47□□□□□ -0.89
RETREG2-201ENST00000273048 KRTAP19-8Q3LI54 63 aa9.41□□□□□ -0.9
RETREG2-201ENST00000273048 KRTAP10-5P60370 271 aa9.4□□□□□ -0.9
RETREG2-201ENST00000273048 MT1XP80297 61 aa9.38□□□□□ -0.91
RETREG2-201ENST00000273048 MT1BP07438 61 aa9.37□□□□□ -0.91
RETREG2-201ENST00000273048 KRTAP12-3P60328 96 aa9.29□□□□□ -0.92
RETREG2-201ENST00000273048 KRTAP10-12P60413 245 aa9.27□□□□□ -0.93
RETREG2-201ENST00000273048 KRTAP10-7P60409 375 aaPredicted RBP9.2□□□□□ -0.94
RETREG2-201ENST00000273048 KRTAP9-3Q9BYQ3 159 aa9.12□□□□□ -0.95
RETREG2-201ENST00000273048 PRO2289Q9P1D8 64 aa9.11□□□□□ -0.95
RETREG2-201ENST00000273048 INE1O15225 51 aa9.01□□□□□ -0.97
RETREG2-201ENST00000273048 USH2AO75445 5202 aa8.9□□□□□ -0.98
RETREG2-201ENST00000273048 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
RETREG2-201ENST00000273048 KRTAP19-5Q3LI72 72 aa8.84□□□□□ -0.99
RETREG2-201ENST00000273048 KMT2DO14686 5537 aa8.83□□□□□ -1
RETREG2-201ENST00000273048 LCE2BO14633 110 aa8.83□□□□□ -1
RETREG2-201ENST00000273048 LCE3CQ5T5A8 94 aa8.75□□□□□ -1.01
RETREG2-201ENST00000273048 KRTAP4-8A0A0G2JLE6 195 aa8.6□□□□□ -1.03
RETREG2-201ENST00000273048 KRTAP4-8Q9BYQ9 185 aa8.6□□□□□ -1.03
RETREG2-201ENST00000273048 KRTAP9-6A8MVA2 160 aa8.55□□□□□ -1.04
RETREG2-201ENST00000273048 KRTAP4-7Q9BYR0 210 aa8.4□□□□□ -1.06
RETREG2-201ENST00000273048 KRTAP19-7Q3SYF9 63 aa8.35□□□□□ -1.07
RETREG2-201ENST00000273048 KRTAP2-3P0C7H8 128 aa8.25□□□□□ -1.09
RETREG2-201ENST00000273048 KRTAP2-4Q9BYR9 128 aa8.25□□□□□ -1.09
RETREG2-201ENST00000273048 KRTAP2-1Q9BYU5 128 aa8.25□□□□□ -1.09
RETREG2-201ENST00000273048 SSPOA2VEC9 5147 aa8.18□□□□□ -1.1
RETREG2-201ENST00000273048 FSIP2Q5CZC0 6907 aa8.16□□□□□ -1.1
RETREG2-201ENST00000273048 MT1LQ93083 61 aa8.12□□□□□ -1.11
RETREG2-201ENST00000273048 MT1EP04732 61 aa8.07□□□□□ -1.12
RETREG2-201ENST00000273048 KRTAP19-4Q3LI73 84 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms