RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 EPPK1P58107 5090 aaKnown RBP10.76□□□□□ -0.69
RAB5A-201ENST00000273047 KRTAP10-8P60410 259 aa10.76□□□□□ -0.69
RAB5A-201ENST00000273047 KRTAP3-1Q9BYR8 98 aa10.74□□□□□ -0.69
RAB5A-201ENST00000273047 H0YAA0 97 aa10.63□□□□□ -0.71
RAB5A-201ENST00000273047 LPAP08519 4548 aa10.61□□□□□ -0.71
RAB5A-201ENST00000273047 H3BS24 57 aa10.56□□□□□ -0.72
RAB5A-201ENST00000273047 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
RAB5A-201ENST00000273047 XP32Q5T750 250 aa10.53□□□□□ -0.72
RAB5A-201ENST00000273047 A0A1B0GU33 70 aa10.5□□□□□ -0.73
RAB5A-201ENST00000273047 LRP2P98164 4655 aa10.5□□□□□ -0.73
RAB5A-201ENST00000273047 KRTAP25-1Q3LHN0 102 aa10.5□□□□□ -0.73
RAB5A-201ENST00000273047 ABCA13Q86UQ4 5058 aa10.49□□□□□ -0.73
RAB5A-201ENST00000273047 COX6B2Q6YFQ2 88 aa10.48□□□□□ -0.73
RAB5A-201ENST00000273047 RPL37P61927 97 aaKnown RBP10.47□□□□□ -0.73
RAB5A-201ENST00000273047 H1FX-AS1Q4G0G2 97 aa10.45□□□□□ -0.74
RAB5A-201ENST00000273047 KRTAP4-5Q9BYR2 181 aa10.4□□□□□ -0.75
RAB5A-201ENST00000273047 ROMO1P60602 79 aa10.33□□□□□ -0.76
RAB5A-201ENST00000273047 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
RAB5A-201ENST00000273047 CRIPTQ9P021 101 aa10.29□□□□□ -0.76
RAB5A-201ENST00000273047 K7ERS5 55 aa10.24□□□□□ -0.77
RAB5A-201ENST00000273047 S4R3F8 94 aa10.16□□□□□ -0.78
RAB5A-201ENST00000273047 TPRXLQ17RH7 258 aa10.12□□□□□ -0.79
RAB5A-201ENST00000273047 KRTAP10-6P60371 365 aaPredicted RBP10.1□□□□□ -0.79
RAB5A-201ENST00000273047 HERC2O95714 4834 aa10.08□□□□□ -0.8
RAB5A-201ENST00000273047 P0C880 135 aa10.06□□□□□ -0.8
RAB5A-201ENST00000273047 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
RAB5A-201ENST00000273047 KRTAP13-4Q3LI77 160 aa10.04□□□□□ -0.8
RAB5A-201ENST00000273047 A0A0D9SG42 100 aa9.98□□□□□ -0.81
RAB5A-201ENST00000273047 MUC17Q685J3 4493 aa9.92□□□□□ -0.82
RAB5A-201ENST00000273047 MUC2Q02817 5179 aa9.92□□□□□ -0.82
RAB5A-201ENST00000273047 J3QL48 77 aa9.9□□□□□ -0.82
RAB5A-201ENST00000273047 SPINT4Q6UDR6 99 aa9.86□□□□□ -0.83
RAB5A-201ENST00000273047 C10orf95Q9H7T3 257 aa9.84□□□□□ -0.83
RAB5A-201ENST00000273047 KRTAP4-1Q9BYQ7 146 aa9.84□□□□□ -0.83
RAB5A-201ENST00000273047 BIRC6Q9NR09 4857 aa9.75□□□□□ -0.85
RAB5A-201ENST00000273047 HERC1Q15751 4861 aa9.74□□□□□ -0.85
RAB5A-201ENST00000273047 SEC61BP60468 96 aaKnown RBP9.74□□□□□ -0.85
RAB5A-201ENST00000273047 KRTAP12-2P59991 146 aa9.72□□□□□ -0.85
RAB5A-201ENST00000273047 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
RAB5A-201ENST00000273047 KRTAP15-1Q3LI76 137 aa9.68□□□□□ -0.86
RAB5A-201ENST00000273047 KRTAP12-1P59990 96 aa9.61□□□□□ -0.87
RAB5A-201ENST00000273047 NDUFAF8A1L188 74 aa9.6□□□□□ -0.87
RAB5A-201ENST00000273047 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
RAB5A-201ENST00000273047 KRTAP19-2Q3LHN2 52 aa9.52□□□□□ -0.88
RAB5A-201ENST00000273047 M0QZ58 72 aa9.51□□□□□ -0.89
RAB5A-201ENST00000273047 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.9
RAB5A-201ENST00000273047 R4GN34 69 aa9.45□□□□□ -0.9
RAB5A-201ENST00000273047 FAT4Q6V0I7 4981 aa9.42□□□□□ -0.9
RAB5A-201ENST00000273047 FLGP20930 4061 aaPredicted RBP9.36□□□□□ -0.91
RAB5A-201ENST00000273047 RNF213Q63HN8 5207 aa9.29□□□□□ -0.92
RAB5A-201ENST00000273047 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
RAB5A-201ENST00000273047 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
RAB5A-201ENST00000273047 PLAC4Q8WY50 150 aa9.06□□□□□ -0.96
RAB5A-201ENST00000273047 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
RAB5A-201ENST00000273047 M0R2T5 61 aa8.91□□□□□ -0.98
RAB5A-201ENST00000273047 MT1HP80294 61 aa8.84□□□□□ -0.99
RAB5A-201ENST00000273047 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
RAB5A-201ENST00000273047 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
RAB5A-201ENST00000273047 LUZP6Q538Z0 58 aa8.71□□□□□ -1.02
RAB5A-201ENST00000273047 MT1FP04733 61 aa8.67□□□□□ -1.02
RAB5A-201ENST00000273047 SPRR2GQ9BYE4 73 aa8.65□□□□□ -1.02
RAB5A-201ENST00000273047 KRTAP10-10P60014 251 aa8.64□□□□□ -1.03
RAB5A-201ENST00000273047 MT2AP02795 61 aa8.63□□□□□ -1.03
RAB5A-201ENST00000273047 KRTAP9-8Q9BYQ0 159 aa8.61□□□□□ -1.03
RAB5A-201ENST00000273047 A0A0A0MQY5 61 aa8.6□□□□□ -1.03
RAB5A-201ENST00000273047 TNP1P09430 55 aa8.51□□□□□ -1.05
RAB5A-201ENST00000273047 SPRR5A0A1B0GTR4 108 aa8.37□□□□□ -1.07
RAB5A-201ENST00000273047 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
RAB5A-201ENST00000273047 MT1BP07438 61 aa8.29□□□□□ -1.08
RAB5A-201ENST00000273047 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
RAB5A-201ENST00000273047 USH2AO75445 5202 aa8.24□□□□□ -1.09
RAB5A-201ENST00000273047 KRTAP9-3Q9BYQ3 159 aa8.23□□□□□ -1.09
RAB5A-201ENST00000273047 LCE3AQ5TA76 89 aa8.21□□□□□ -1.1
RAB5A-201ENST00000273047 KRTAP10-5P60370 271 aa8.19□□□□□ -1.1
RAB5A-201ENST00000273047 MT1XP80297 61 aa8.18□□□□□ -1.1
RAB5A-201ENST00000273047 LCE2BO14633 110 aa8.01□□□□□ -1.13
RAB5A-201ENST00000273047 KRTAP10-7P60409 375 aaPredicted RBP8□□□□□ -1.13
RAB5A-201ENST00000273047 KMT2DO14686 5537 aa7.98□□□□□ -1.13
RAB5A-201ENST00000273047 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
RAB5A-201ENST00000273047 KRTAP10-12P60413 245 aa7.91□□□□□ -1.14
RAB5A-201ENST00000273047 KRTAP8-1Q8IUC2 63 aa7.87□□□□□ -1.15
RAB5A-201ENST00000273047 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
RAB5A-201ENST00000273047 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
RAB5A-201ENST00000273047 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
RAB5A-201ENST00000273047 INE1O15225 51 aa7.65□□□□□ -1.18
RAB5A-201ENST00000273047 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
RAB5A-201ENST00000273047 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
RAB5A-201ENST00000273047 KRTAP19-5Q3LI72 72 aa7.59□□□□□ -1.19
RAB5A-201ENST00000273047 SSPOA2VEC9 5147 aa7.52□□□□□ -1.21
RAB5A-201ENST00000273047 KRTAP19-7Q3SYF9 63 aa7.3□□□□□ -1.24
RAB5A-201ENST00000273047 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
RAB5A-201ENST00000273047 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
RAB5A-201ENST00000273047 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
RAB5A-201ENST00000273047 KRTAP9-6A8MVA2 160 aa7.12□□□□□ -1.27
RAB5A-201ENST00000273047 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
RAB5A-201ENST00000273047 MT1EP04732 61 aa7.07□□□□□ -1.28
RAB5A-201ENST00000273047 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
RAB5A-201ENST00000273047 MT1LQ93083 61 aa7.03□□□□□ -1.28
RAB5A-201ENST00000273047 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
RAB5A-201ENST00000273047 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms