RNA–Protein interactions for RNA: ENST00000268489.9

ZFHX3-201, Transcript of zinc finger homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFHX3, Length 16,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX3-201ENST00000268489 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
ZFHX3-201ENST00000268489 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
ZFHX3-201ENST00000268489 LYSTQ99698 3801 aa4.44□□□□□ -1.7
ZFHX3-201ENST00000268489 MUC3AQ02505 3323 aa4.42□□□□□ -1.7
ZFHX3-201ENST00000268489 VPS13DQ5THJ4 4388 aa4.42□□□□□ -1.7
ZFHX3-201ENST00000268489 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
ZFHX3-201ENST00000268489 KRTAP3-1Q9BYR8 98 aa4.38□□□□□ -1.71
ZFHX3-201ENST00000268489 DNAH17Q9UFH2 4485 aa4.36□□□□□ -1.71
ZFHX3-201ENST00000268489 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
ZFHX3-201ENST00000268489 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
ZFHX3-201ENST00000268489 KRTAP3-2Q9BYR7 98 aa4.23□□□□□ -1.73
ZFHX3-201ENST00000268489 DNAH8Q96JB1 4490 aa4.2□□□□□ -1.74
ZFHX3-201ENST00000268489 DNAH9Q9NYC9 4486 aa4.19□□□□□ -1.74
ZFHX3-201ENST00000268489 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
ZFHX3-201ENST00000268489 A0A1B0GVY2 172 aa4.13□□□□□ -1.75
ZFHX3-201ENST00000268489 FAT2Q9NYQ8 4349 aa4.11□□□□□ -1.75
ZFHX3-201ENST00000268489 DYNC2H1Q8NCM8 4307 aaKnown RBP4.11□□□□□ -1.75
ZFHX3-201ENST00000268489 KRTAP3-3Q9BYR6 98 aa4.1□□□□□ -1.75
ZFHX3-201ENST00000268489 PKHD1P08F94 4074 aa4.1□□□□□ -1.75
ZFHX3-201ENST00000268489 CSMD2Q7Z408 3487 aa4.09□□□□□ -1.76
ZFHX3-201ENST00000268489 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
ZFHX3-201ENST00000268489 SACSQ9NZJ4 4579 aa4.03□□□□□ -1.76
ZFHX3-201ENST00000268489 PKHD1L1Q86WI1 4243 aa4.01□□□□□ -1.77
ZFHX3-201ENST00000268489 DNAH5Q8TE73 4624 aa4□□□□□ -1.77
ZFHX3-201ENST00000268489 PKD1P98161 4303 aa3.99□□□□□ -1.77
ZFHX3-201ENST00000268489 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
ZFHX3-201ENST00000268489 LRP1Q07954 4544 aaKnown RBP3.94□□□□□ -1.78
ZFHX3-201ENST00000268489 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
ZFHX3-201ENST00000268489 TNXBP22105 4242 aa3.92□□□□□ -1.78
ZFHX3-201ENST00000268489 KRTAP19-4Q3LI73 84 aa3.9□□□□□ -1.79
ZFHX3-201ENST00000268489 LRP1BQ9NZR2 4599 aa3.9□□□□□ -1.79
ZFHX3-201ENST00000268489 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
ZFHX3-201ENST00000268489 FAT1Q14517 4588 aa3.89□□□□□ -1.79
ZFHX3-201ENST00000268489 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
ZFHX3-201ENST00000268489 HSPG2P98160 4391 aa3.84□□□□□ -1.8
ZFHX3-201ENST00000268489 MT3P25713 68 aa3.8□□□□□ -1.8
ZFHX3-201ENST00000268489 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
ZFHX3-201ENST00000268489 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
ZFHX3-201ENST00000268489 KRTAP10-4P60372 401 aaPredicted RBP3.78□□□□□ -1.8
ZFHX3-201ENST00000268489 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
ZFHX3-201ENST00000268489 RYR1P21817 5038 aa3.65□□□□□ -1.83
ZFHX3-201ENST00000268489 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
ZFHX3-201ENST00000268489 STARD9Q9P2P6 4700 aa3.57□□□□□ -1.84
ZFHX3-201ENST00000268489 LORP23490 312 aaPredicted RBP3.53□□□□□ -1.84
ZFHX3-201ENST00000268489 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
ZFHX3-201ENST00000268489 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
ZFHX3-201ENST00000268489 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
ZFHX3-201ENST00000268489 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
ZFHX3-201ENST00000268489 KRTAP4-5Q9BYR2 181 aa3.45□□□□□ -1.86
ZFHX3-201ENST00000268489 RYR3Q15413 4870 aa3.4□□□□□ -1.87
ZFHX3-201ENST00000268489 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
ZFHX3-201ENST00000268489 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.87
ZFHX3-201ENST00000268489 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
ZFHX3-201ENST00000268489 RYR2Q92736 4967 aa3.3□□□□□ -1.88
ZFHX3-201ENST00000268489 HYDINQ4G0P3 5121 aa3.3□□□□□ -1.88
ZFHX3-201ENST00000268489 DNHD1Q96M86 4753 aa3.27□□□□□ -1.89
ZFHX3-201ENST00000268489 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
ZFHX3-201ENST00000268489 MT1HP80294 61 aa3.25□□□□□ -1.89
ZFHX3-201ENST00000268489 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
ZFHX3-201ENST00000268489 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
ZFHX3-201ENST00000268489 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
ZFHX3-201ENST00000268489 MT2AP02795 61 aa3.22□□□□□ -1.89
ZFHX3-201ENST00000268489 KMT2CQ8NEZ4 4911 aaKnown RBP3.22□□□□□ -1.89
ZFHX3-201ENST00000268489 HERC2O95714 4834 aa3.21□□□□□ -1.9
ZFHX3-201ENST00000268489 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
ZFHX3-201ENST00000268489 LRP2P98164 4655 aa3.17□□□□□ -1.9
ZFHX3-201ENST00000268489 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.9
ZFHX3-201ENST00000268489 MT1XP80297 61 aa3.14□□□□□ -1.91
ZFHX3-201ENST00000268489 MT1FP04733 61 aa3.14□□□□□ -1.91
ZFHX3-201ENST00000268489 PCLOQ9Y6V0 5065 aa3.12□□□□□ -1.91
ZFHX3-201ENST00000268489 MT1GP13640 62 aa3.05□□□□□ -1.92
ZFHX3-201ENST00000268489 LPAP08519 4548 aa3.05□□□□□ -1.92
ZFHX3-201ENST00000268489 MT1LQ93083 61 aa3.03□□□□□ -1.93
ZFHX3-201ENST00000268489 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
ZFHX3-201ENST00000268489 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
ZFHX3-201ENST00000268489 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
ZFHX3-201ENST00000268489 HERC1Q15751 4861 aa3.01□□□□□ -1.93
ZFHX3-201ENST00000268489 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
ZFHX3-201ENST00000268489 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
ZFHX3-201ENST00000268489 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
ZFHX3-201ENST00000268489 KRTAP9-8Q9BYQ0 159 aa2.98□□□□□ -1.93
ZFHX3-201ENST00000268489 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
ZFHX3-201ENST00000268489 KRTAP9-3Q9BYQ3 159 aa2.95□□□□□ -1.94
ZFHX3-201ENST00000268489 MT1EP04732 61 aa2.95□□□□□ -1.94
ZFHX3-201ENST00000268489 MT1BP07438 61 aa2.94□□□□□ -1.94
ZFHX3-201ENST00000268489 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
ZFHX3-201ENST00000268489 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
ZFHX3-201ENST00000268489 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
ZFHX3-201ENST00000268489 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
ZFHX3-201ENST00000268489 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
ZFHX3-201ENST00000268489 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
ZFHX3-201ENST00000268489 LCE2CQ5TA81 110 aa2.83□□□□□ -1.96
ZFHX3-201ENST00000268489 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
ZFHX3-201ENST00000268489 SPRR2EP22531 72 aa2.81□□□□□ -1.96
ZFHX3-201ENST00000268489 SPRR2BP35325 72 aa2.81□□□□□ -1.96
ZFHX3-201ENST00000268489 SPRR2AP35326 72 aa2.81□□□□□ -1.96
ZFHX3-201ENST00000268489 MT1AP04731 61 aa2.81□□□□□ -1.96
ZFHX3-201ENST00000268489 LCE2BO14633 110 aa2.8□□□□□ -1.96
ZFHX3-201ENST00000268489 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.96
ZFHX3-201ENST00000268489 KMT2DO14686 5537 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms