RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 PKHD1L1Q86WI1 4243 aa7.95□□□□□ -1.14
SCAMP2-201ENST00000268099 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
SCAMP2-201ENST00000268099 SMR3BP02814 79 aaPredicted RBP7.93□□□□□ -1.14
SCAMP2-201ENST00000268099 C10orf95Q9H7T3 257 aa7.93□□□□□ -1.14
SCAMP2-201ENST00000268099 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
SCAMP2-201ENST00000268099 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
SCAMP2-201ENST00000268099 DMBT1Q9UGM3 2413 aaPredicted RBP7.86□□□□□ -1.15
SCAMP2-201ENST00000268099 S4R3F8 94 aa7.84□□□□□ -1.15
SCAMP2-201ENST00000268099 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
SCAMP2-201ENST00000268099 NDUFAF8A1L188 74 aa7.83□□□□□ -1.16
SCAMP2-201ENST00000268099 FAT1Q14517 4588 aa7.82□□□□□ -1.16
SCAMP2-201ENST00000268099 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
SCAMP2-201ENST00000268099 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
SCAMP2-201ENST00000268099 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
SCAMP2-201ENST00000268099 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
SCAMP2-201ENST00000268099 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
SCAMP2-201ENST00000268099 KRTAP12-1P59990 96 aa7.71□□□□□ -1.18
SCAMP2-201ENST00000268099 FAT3Q8TDW7 4589 aa7.7□□□□□ -1.18
SCAMP2-201ENST00000268099 XP32Q5T750 250 aa7.66□□□□□ -1.18
SCAMP2-201ENST00000268099 HSPG2P98160 4391 aa7.66□□□□□ -1.18
SCAMP2-201ENST00000268099 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
SCAMP2-201ENST00000268099 A0A1B0GVY2 172 aa7.62□□□□□ -1.19
SCAMP2-201ENST00000268099 TNXBP22105 4242 aa7.58□□□□□ -1.2
SCAMP2-201ENST00000268099 M0QZ58 72 aa7.55□□□□□ -1.2
SCAMP2-201ENST00000268099 KIAA1109Q2LD37 5005 aa7.53□□□□□ -1.2
SCAMP2-201ENST00000268099 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
SCAMP2-201ENST00000268099 RYR1P21817 5038 aa7.45□□□□□ -1.22
SCAMP2-201ENST00000268099 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
SCAMP2-201ENST00000268099 LPAP08519 4548 aa7.38□□□□□ -1.23
SCAMP2-201ENST00000268099 BIRC6Q9NR09 4857 aa7.37□□□□□ -1.23
SCAMP2-201ENST00000268099 PLAC4Q8WY50 150 aa7.34□□□□□ -1.24
SCAMP2-201ENST00000268099 Q5VSD8 79 aa7.3□□□□□ -1.24
SCAMP2-201ENST00000268099 R4GN34 69 aa7.28□□□□□ -1.24
SCAMP2-201ENST00000268099 HERC2O95714 4834 aa7.24□□□□□ -1.25
SCAMP2-201ENST00000268099 ABCA13Q86UQ4 5058 aa7.24□□□□□ -1.25
SCAMP2-201ENST00000268099 LRP2P98164 4655 aa7.22□□□□□ -1.25
SCAMP2-201ENST00000268099 KRTAP4-5Q9BYR2 181 aa7.22□□□□□ -1.25
SCAMP2-201ENST00000268099 MT1HL1P0DM35 61 aa7.18□□□□□ -1.26
SCAMP2-201ENST00000268099 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
SCAMP2-201ENST00000268099 A0A0A0MQY5 61 aa7.17□□□□□ -1.26
SCAMP2-201ENST00000268099 PCLOQ9Y6V0 5065 aa7.15□□□□□ -1.26
SCAMP2-201ENST00000268099 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
SCAMP2-201ENST00000268099 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
SCAMP2-201ENST00000268099 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
SCAMP2-201ENST00000268099 HERC1Q15751 4861 aa6.95□□□□□ -1.3
SCAMP2-201ENST00000268099 MUC17Q685J3 4493 aa6.91□□□□□ -1.3
SCAMP2-201ENST00000268099 SEC61BP60468 96 aaKnown RBP6.86□□□□□ -1.31
SCAMP2-201ENST00000268099 KRTAP4-1Q9BYQ7 146 aa6.83□□□□□ -1.32
SCAMP2-201ENST00000268099 J3QL48 77 aa6.8□□□□□ -1.32
SCAMP2-201ENST00000268099 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
SCAMP2-201ENST00000268099 TNP1P09430 55 aa6.75□□□□□ -1.33
SCAMP2-201ENST00000268099 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
SCAMP2-201ENST00000268099 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
SCAMP2-201ENST00000268099 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
SCAMP2-201ENST00000268099 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
SCAMP2-201ENST00000268099 MUC2Q02817 5179 aa6.54□□□□□ -1.36
SCAMP2-201ENST00000268099 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.37
SCAMP2-201ENST00000268099 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
SCAMP2-201ENST00000268099 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
SCAMP2-201ENST00000268099 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
SCAMP2-201ENST00000268099 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
SCAMP2-201ENST00000268099 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
SCAMP2-201ENST00000268099 INE1O15225 51 aa6.27□□□□□ -1.41
SCAMP2-201ENST00000268099 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
SCAMP2-201ENST00000268099 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
SCAMP2-201ENST00000268099 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
SCAMP2-201ENST00000268099 M0R2T5 61 aa6.05□□□□□ -1.44
SCAMP2-201ENST00000268099 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
SCAMP2-201ENST00000268099 MT1FP04733 61 aa6.02□□□□□ -1.45
SCAMP2-201ENST00000268099 KRTAP10-10P60014 251 aa6□□□□□ -1.45
SCAMP2-201ENST00000268099 MT2AP02795 61 aa5.99□□□□□ -1.45
SCAMP2-201ENST00000268099 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
SCAMP2-201ENST00000268099 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
SCAMP2-201ENST00000268099 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
SCAMP2-201ENST00000268099 MT1HP80294 61 aa5.97□□□□□ -1.45
SCAMP2-201ENST00000268099 MT1XP80297 61 aa5.96□□□□□ -1.46
SCAMP2-201ENST00000268099 KRTAP9-8Q9BYQ0 159 aa5.9□□□□□ -1.46
SCAMP2-201ENST00000268099 MT1BP07438 61 aa5.9□□□□□ -1.47
SCAMP2-201ENST00000268099 KRTAP10-7P60409 375 aaPredicted RBP5.83□□□□□ -1.48
SCAMP2-201ENST00000268099 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
SCAMP2-201ENST00000268099 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
SCAMP2-201ENST00000268099 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
SCAMP2-201ENST00000268099 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
SCAMP2-201ENST00000268099 LCE2DQ5TA82 110 aaPredicted RBP5.62□□□□□ -1.51
SCAMP2-201ENST00000268099 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
SCAMP2-201ENST00000268099 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
SCAMP2-201ENST00000268099 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
SCAMP2-201ENST00000268099 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
SCAMP2-201ENST00000268099 USH2AO75445 5202 aa5.48□□□□□ -1.53
SCAMP2-201ENST00000268099 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
SCAMP2-201ENST00000268099 KMT2DO14686 5537 aa5.42□□□□□ -1.54
SCAMP2-201ENST00000268099 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.55
SCAMP2-201ENST00000268099 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.55
SCAMP2-201ENST00000268099 LCE2BO14633 110 aa5.36□□□□□ -1.55
SCAMP2-201ENST00000268099 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
SCAMP2-201ENST00000268099 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
SCAMP2-201ENST00000268099 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
SCAMP2-201ENST00000268099 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
SCAMP2-201ENST00000268099 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
SCAMP2-201ENST00000268099 MT1LQ93083 61 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms