RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 KRTAP3-3Q9BYR6 98 aa4.18□□□□□ -1.74
NEDD1-201ENST00000266742 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
NEDD1-201ENST00000266742 ROMO1P60602 79 aa4.16□□□□□ -1.74
NEDD1-201ENST00000266742 A0A0D9SG42 100 aa4.16□□□□□ -1.74
NEDD1-201ENST00000266742 RYR2Q92736 4967 aa4.14□□□□□ -1.75
NEDD1-201ENST00000266742 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
NEDD1-201ENST00000266742 MT1HL1P0DM35 61 aa4.13□□□□□ -1.75
NEDD1-201ENST00000266742 FAT3Q8TDW7 4589 aa4.13□□□□□ -1.75
NEDD1-201ENST00000266742 KRTAP3-2Q9BYR7 98 aa4.12□□□□□ -1.75
NEDD1-201ENST00000266742 P0C880 135 aa4.09□□□□□ -1.75
NEDD1-201ENST00000266742 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
NEDD1-201ENST00000266742 LRP1Q07954 4544 aaKnown RBP4.08□□□□□ -1.76
NEDD1-201ENST00000266742 M0QZ58 72 aa4.08□□□□□ -1.76
NEDD1-201ENST00000266742 CRIPTQ9P021 101 aa4.08□□□□□ -1.76
NEDD1-201ENST00000266742 TNXBP22105 4242 aa4.06□□□□□ -1.76
NEDD1-201ENST00000266742 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
NEDD1-201ENST00000266742 KMT2CQ8NEZ4 4911 aaKnown RBP4.05□□□□□ -1.76
NEDD1-201ENST00000266742 SEC61BP60468 96 aaKnown RBP4.04□□□□□ -1.76
NEDD1-201ENST00000266742 HSPG2P98160 4391 aa4.03□□□□□ -1.76
NEDD1-201ENST00000266742 KRTAP17-1Q9BYP8 105 aa4.02□□□□□ -1.77
NEDD1-201ENST00000266742 RYR1P21817 5038 aa4.01□□□□□ -1.77
NEDD1-201ENST00000266742 KRTAP12-2P59991 146 aa4□□□□□ -1.77
NEDD1-201ENST00000266742 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
NEDD1-201ENST00000266742 R4GN34 69 aa3.98□□□□□ -1.77
NEDD1-201ENST00000266742 MYCBP2O75592 4640 aa3.97□□□□□ -1.77
NEDD1-201ENST00000266742 J3QL48 77 aa3.97□□□□□ -1.77
NEDD1-201ENST00000266742 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
NEDD1-201ENST00000266742 RYR3Q15413 4870 aa3.93□□□□□ -1.78
NEDD1-201ENST00000266742 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
NEDD1-201ENST00000266742 H3BS24 57 aa3.89□□□□□ -1.79
NEDD1-201ENST00000266742 KRTAP4-5Q9BYR2 181 aa3.88□□□□□ -1.79
NEDD1-201ENST00000266742 LRP2P98164 4655 aa3.87□□□□□ -1.79
NEDD1-201ENST00000266742 LPAP08519 4548 aa3.82□□□□□ -1.8
NEDD1-201ENST00000266742 CAMK2N1Q7Z7J9 78 aa3.8□□□□□ -1.8
NEDD1-201ENST00000266742 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
NEDD1-201ENST00000266742 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
NEDD1-201ENST00000266742 LORP23490 312 aaPredicted RBP3.77□□□□□ -1.81
NEDD1-201ENST00000266742 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
NEDD1-201ENST00000266742 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
NEDD1-201ENST00000266742 ABCA13Q86UQ4 5058 aa3.73□□□□□ -1.81
NEDD1-201ENST00000266742 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
NEDD1-201ENST00000266742 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
NEDD1-201ENST00000266742 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
NEDD1-201ENST00000266742 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
NEDD1-201ENST00000266742 TNP1P09430 55 aa3.65□□□□□ -1.83
NEDD1-201ENST00000266742 HERC2O95714 4834 aa3.63□□□□□ -1.83
NEDD1-201ENST00000266742 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
NEDD1-201ENST00000266742 M0R2T5 61 aa3.6□□□□□ -1.83
NEDD1-201ENST00000266742 LCE2DQ5TA82 110 aaPredicted RBP3.59□□□□□ -1.83
NEDD1-201ENST00000266742 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
NEDD1-201ENST00000266742 BIRC6Q9NR09 4857 aa3.56□□□□□ -1.84
NEDD1-201ENST00000266742 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.85
NEDD1-201ENST00000266742 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
NEDD1-201ENST00000266742 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
NEDD1-201ENST00000266742 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
NEDD1-201ENST00000266742 MUC2Q02817 5179 aa3.47□□□□□ -1.85
NEDD1-201ENST00000266742 MT1HP80294 61 aa3.46□□□□□ -1.86
NEDD1-201ENST00000266742 KRTAP19-1Q8IUB9 90 aa3.46□□□□□ -1.86
NEDD1-201ENST00000266742 HERC1Q15751 4861 aa3.46□□□□□ -1.86
NEDD1-201ENST00000266742 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
NEDD1-201ENST00000266742 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
NEDD1-201ENST00000266742 MT2AP02795 61 aa3.41□□□□□ -1.86
NEDD1-201ENST00000266742 MT1FP04733 61 aa3.39□□□□□ -1.87
NEDD1-201ENST00000266742 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
NEDD1-201ENST00000266742 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
NEDD1-201ENST00000266742 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
NEDD1-201ENST00000266742 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
NEDD1-201ENST00000266742 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
NEDD1-201ENST00000266742 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
NEDD1-201ENST00000266742 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
NEDD1-201ENST00000266742 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
NEDD1-201ENST00000266742 MT1BP07438 61 aa3.28□□□□□ -1.89
NEDD1-201ENST00000266742 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
NEDD1-201ENST00000266742 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
NEDD1-201ENST00000266742 MT1XP80297 61 aa3.26□□□□□ -1.89
NEDD1-201ENST00000266742 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
NEDD1-201ENST00000266742 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
NEDD1-201ENST00000266742 KRTAP9-3Q9BYQ3 159 aa3.22□□□□□ -1.89
NEDD1-201ENST00000266742 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
NEDD1-201ENST00000266742 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
NEDD1-201ENST00000266742 INE1O15225 51 aa3.07□□□□□ -1.92
NEDD1-201ENST00000266742 LCE2BO14633 110 aa3.07□□□□□ -1.92
NEDD1-201ENST00000266742 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
NEDD1-201ENST00000266742 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
NEDD1-201ENST00000266742 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
NEDD1-201ENST00000266742 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
NEDD1-201ENST00000266742 LCE2AQ5TA79 106 aaPredicted RBP3.02□□□□□ -1.93
NEDD1-201ENST00000266742 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
NEDD1-201ENST00000266742 KRTAP4-8A0A0G2JLE6 195 aa2.95□□□□□ -1.94
NEDD1-201ENST00000266742 KRTAP4-8Q9BYQ9 185 aa2.95□□□□□ -1.94
NEDD1-201ENST00000266742 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.95
NEDD1-201ENST00000266742 KRTAP9-2Q9BYQ4 174 aa2.87□□□□□ -1.95
NEDD1-201ENST00000266742 USH2AO75445 5202 aa2.85□□□□□ -1.95
NEDD1-201ENST00000266742 MT1EP04732 61 aa2.84□□□□□ -1.96
NEDD1-201ENST00000266742 MT1LQ93083 61 aa2.84□□□□□ -1.96
NEDD1-201ENST00000266742 KRTAP9-6A0A140TA67 174 aa2.83□□□□□ -1.96
NEDD1-201ENST00000266742 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
NEDD1-201ENST00000266742 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
NEDD1-201ENST00000266742 KRTAP4-7Q9BYR0 210 aa2.8□□□□□ -1.96
NEDD1-201ENST00000266742 KMT2DO14686 5537 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms