RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 KRTAP12-2P59991 146 aa12.25□□□□□ -0.45
CCM2L-201ENST00000262659 HYDINQ4G0P3 5121 aa12.18□□□□□ -0.46
CCM2L-201ENST00000262659 XP32Q5T750 250 aa12.08□□□□□ -0.48
CCM2L-201ENST00000262659 DNHD1Q96M86 4753 aa12.07□□□□□ -0.48
CCM2L-201ENST00000262659 KRTAP12-1P59990 96 aa12.05□□□□□ -0.48
CCM2L-201ENST00000262659 SACSQ9NZJ4 4579 aa12.03□□□□□ -0.48
CCM2L-201ENST00000262659 LUZP6Q538Z0 58 aa11.98□□□□□ -0.49
CCM2L-201ENST00000262659 PKHD1L1Q86WI1 4243 aa11.93□□□□□ -0.5
CCM2L-201ENST00000262659 PKHD1P08F94 4074 aa11.93□□□□□ -0.5
CCM2L-201ENST00000262659 KRTAP10-8P60410 259 aa11.87□□□□□ -0.51
CCM2L-201ENST00000262659 SMR3BP02814 79 aaPredicted RBP11.78□□□□□ -0.52
CCM2L-201ENST00000262659 PLAC4Q8WY50 150 aa11.73□□□□□ -0.53
CCM2L-201ENST00000262659 FAT1Q14517 4588 aa11.68□□□□□ -0.54
CCM2L-201ENST00000262659 DYNC1H1Q14204 4646 aaKnown RBP11.68□□□□□ -0.54
CCM2L-201ENST00000262659 HSPG2P98160 4391 aa11.67□□□□□ -0.54
CCM2L-201ENST00000262659 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
CCM2L-201ENST00000262659 LRP1Q07954 4544 aaKnown RBP11.63□□□□□ -0.55
CCM2L-201ENST00000262659 M0QZ58 72 aa11.61□□□□□ -0.55
CCM2L-201ENST00000262659 FAT3Q8TDW7 4589 aa11.53□□□□□ -0.56
CCM2L-201ENST00000262659 KRTAP10-4P60372 401 aaPredicted RBP11.52□□□□□ -0.57
CCM2L-201ENST00000262659 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
CCM2L-201ENST00000262659 TNXBP22105 4242 aa11.41□□□□□ -0.58
CCM2L-201ENST00000262659 A0A1B0GVY2 172 aa11.33□□□□□ -0.6
CCM2L-201ENST00000262659 LPAP08519 4548 aa11.22□□□□□ -0.61
CCM2L-201ENST00000262659 R4GN34 69 aa11.2□□□□□ -0.62
CCM2L-201ENST00000262659 RYR2Q92736 4967 aa11.1□□□□□ -0.63
CCM2L-201ENST00000262659 PP632Q6XCG6 107 aa11.03□□□□□ -0.64
CCM2L-201ENST00000262659 LORP23490 312 aaPredicted RBP10.99□□□□□ -0.65
CCM2L-201ENST00000262659 KMT2CQ8NEZ4 4911 aaKnown RBP10.97□□□□□ -0.65
CCM2L-201ENST00000262659 LRP2P98164 4655 aa10.89□□□□□ -0.67
CCM2L-201ENST00000262659 SEC61BP60468 96 aaKnown RBP10.88□□□□□ -0.67
CCM2L-201ENST00000262659 Q5VSD8 79 aa10.88□□□□□ -0.67
CCM2L-201ENST00000262659 CAMK2N1Q7Z7J9 78 aa10.77□□□□□ -0.69
CCM2L-201ENST00000262659 KRTAP17-1Q9BYP8 105 aa10.76□□□□□ -0.69
CCM2L-201ENST00000262659 KRTAP21-3Q3LHN1 58 aa10.74□□□□□ -0.69
CCM2L-201ENST00000262659 RYR1P21817 5038 aa10.73□□□□□ -0.69
CCM2L-201ENST00000262659 SPRR5A0A1B0GTR4 108 aa10.71□□□□□ -0.69
CCM2L-201ENST00000262659 MT1HL1P0DM35 61 aa10.65□□□□□ -0.7
CCM2L-201ENST00000262659 RYR3Q15413 4870 aa10.57□□□□□ -0.72
CCM2L-201ENST00000262659 KIAA1109Q2LD37 5005 aa10.55□□□□□ -0.72
CCM2L-201ENST00000262659 PRO2289Q9P1D8 64 aa10.49□□□□□ -0.73
CCM2L-201ENST00000262659 TNP1P09430 55 aa10.43□□□□□ -0.74
CCM2L-201ENST00000262659 ABCA13Q86UQ4 5058 aa10.38□□□□□ -0.75
CCM2L-201ENST00000262659 KRTAP23-1A1A580 65 aa10.37□□□□□ -0.75
CCM2L-201ENST00000262659 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
CCM2L-201ENST00000262659 EPPK1P58107 5090 aaKnown RBP10.18□□□□□ -0.78
CCM2L-201ENST00000262659 KRTAP4-1Q9BYQ7 146 aa10.15□□□□□ -0.78
CCM2L-201ENST00000262659 INE1O15225 51 aa10.13□□□□□ -0.79
CCM2L-201ENST00000262659 KRTAP4-5Q9BYR2 181 aa10.06□□□□□ -0.8
CCM2L-201ENST00000262659 KRTAP19-2Q3LHN2 52 aa10.03□□□□□ -0.8
CCM2L-201ENST00000262659 LCE3AQ5TA76 89 aa9.85□□□□□ -0.83
CCM2L-201ENST00000262659 FLGP20930 4061 aaPredicted RBP9.77□□□□□ -0.84
CCM2L-201ENST00000262659 MUC2Q02817 5179 aa9.76□□□□□ -0.85
CCM2L-201ENST00000262659 HERC1Q15751 4861 aa9.68□□□□□ -0.86
CCM2L-201ENST00000262659 J3QL48 77 aa9.65□□□□□ -0.86
CCM2L-201ENST00000262659 HERC2O95714 4834 aa9.62□□□□□ -0.87
CCM2L-201ENST00000262659 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
CCM2L-201ENST00000262659 KRTAP8-1Q8IUC2 63 aa9.51□□□□□ -0.89
CCM2L-201ENST00000262659 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.89
CCM2L-201ENST00000262659 BIRC6Q9NR09 4857 aa9.46□□□□□ -0.9
CCM2L-201ENST00000262659 KRTAP19-1Q8IUB9 90 aa9.44□□□□□ -0.9
CCM2L-201ENST00000262659 KRTAP10-12P60413 245 aa9.35□□□□□ -0.91
CCM2L-201ENST00000262659 KRTAP12-3P60328 96 aa9.29□□□□□ -0.92
CCM2L-201ENST00000262659 FAT4Q6V0I7 4981 aa9.28□□□□□ -0.92
CCM2L-201ENST00000262659 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
CCM2L-201ENST00000262659 HMCN2Q8NDA2 5059 aa9.13□□□□□ -0.95
CCM2L-201ENST00000262659 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
CCM2L-201ENST00000262659 KRTAP10-5P60370 271 aa9.02□□□□□ -0.96
CCM2L-201ENST00000262659 MT1XP80297 61 aa8.97□□□□□ -0.97
CCM2L-201ENST00000262659 UBR4Q5T4S7 5183 aa8.97□□□□□ -0.97
CCM2L-201ENST00000262659 M0R2T5 61 aa8.96□□□□□ -0.98
CCM2L-201ENST00000262659 MT1FP04733 61 aa8.91□□□□□ -0.98
CCM2L-201ENST00000262659 MT1HP80294 61 aa8.89□□□□□ -0.99
CCM2L-201ENST00000262659 KRTAP10-7P60409 375 aaPredicted RBP8.87□□□□□ -0.99
CCM2L-201ENST00000262659 KRTAP19-8Q3LI54 63 aa8.85□□□□□ -0.99
CCM2L-201ENST00000262659 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
CCM2L-201ENST00000262659 MT2AP02795 61 aa8.83□□□□□ -1
CCM2L-201ENST00000262659 MT1BP07438 61 aa8.8□□□□□ -1
CCM2L-201ENST00000262659 LCE3CQ5T5A8 94 aa8.8□□□□□ -1
CCM2L-201ENST00000262659 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
CCM2L-201ENST00000262659 KRTAP9-6A8MVA2 160 aa8.68□□□□□ -1.02
CCM2L-201ENST00000262659 KRTAP19-5Q3LI72 72 aa8.63□□□□□ -1.03
CCM2L-201ENST00000262659 KRTAP2-3P0C7H8 128 aa8.6□□□□□ -1.03
CCM2L-201ENST00000262659 KRTAP2-4Q9BYR9 128 aa8.6□□□□□ -1.03
CCM2L-201ENST00000262659 KRTAP2-1Q9BYU5 128 aa8.6□□□□□ -1.03
CCM2L-201ENST00000262659 KMT2DO14686 5537 aa8.37□□□□□ -1.07
CCM2L-201ENST00000262659 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
CCM2L-201ENST00000262659 KRTAP4-7Q9BYR0 210 aa8.28□□□□□ -1.08
CCM2L-201ENST00000262659 KRTAP4-8A0A0G2JLE6 195 aa8.15□□□□□ -1.1
CCM2L-201ENST00000262659 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
CCM2L-201ENST00000262659 USH2AO75445 5202 aa8.04□□□□□ -1.12
CCM2L-201ENST00000262659 LCE2BO14633 110 aa8.01□□□□□ -1.13
CCM2L-201ENST00000262659 KRTAP19-7Q3SYF9 63 aa7.99□□□□□ -1.13
CCM2L-201ENST00000262659 KRTAP12-4P60329 112 aa7.88□□□□□ -1.15
CCM2L-201ENST00000262659 MT1LQ93083 61 aa7.81□□□□□ -1.16
CCM2L-201ENST00000262659 KRTAP19-4Q3LI73 84 aa7.74□□□□□ -1.17
CCM2L-201ENST00000262659 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
CCM2L-201ENST00000262659 MT1EP04732 61 aa7.66□□□□□ -1.18
CCM2L-201ENST00000262659 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
CCM2L-201ENST00000262659 KRTAP4-3Q9BYR4 195 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms