RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
CIT-201ENST00000261833 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
CIT-201ENST00000261833 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
CIT-201ENST00000261833 KRTAP3-1Q9BYR8 98 aa4.75□□□□□ -1.65
CIT-201ENST00000261833 INE1O15225 51 aa4.71□□□□□ -1.66
CIT-201ENST00000261833 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.66
CIT-201ENST00000261833 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
CIT-201ENST00000261833 DNAH1Q9P2D7 4330 aa4.67□□□□□ -1.66
CIT-201ENST00000261833 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.67
CIT-201ENST00000261833 DYNC2H1Q8NCM8 4307 aaKnown RBP4.63□□□□□ -1.67
CIT-201ENST00000261833 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
CIT-201ENST00000261833 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
CIT-201ENST00000261833 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
CIT-201ENST00000261833 VPS13DQ5THJ4 4388 aa4.53□□□□□ -1.68
CIT-201ENST00000261833 KRTAP3-2Q9BYR7 98 aa4.52□□□□□ -1.69
CIT-201ENST00000261833 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.7
CIT-201ENST00000261833 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
CIT-201ENST00000261833 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
CIT-201ENST00000261833 DNAH11Q96DT5 4516 aa4.34□□□□□ -1.71
CIT-201ENST00000261833 STARD9Q9P2P6 4700 aa4.34□□□□□ -1.71
CIT-201ENST00000261833 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
CIT-201ENST00000261833 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
CIT-201ENST00000261833 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
CIT-201ENST00000261833 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
CIT-201ENST00000261833 PKD1P98161 4303 aa4.28□□□□□ -1.72
CIT-201ENST00000261833 KRTAP10-4P60372 401 aaPredicted RBP4.22□□□□□ -1.73
CIT-201ENST00000261833 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
CIT-201ENST00000261833 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
CIT-201ENST00000261833 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
CIT-201ENST00000261833 PLECQ15149 4684 aaKnown RBP4.19□□□□□ -1.74
CIT-201ENST00000261833 TNXBP22105 4242 aa4.18□□□□□ -1.74
CIT-201ENST00000261833 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
CIT-201ENST00000261833 LCE3AQ5TA76 89 aa4.15□□□□□ -1.74
CIT-201ENST00000261833 KRTAP4-5Q9BYR2 181 aa4.06□□□□□ -1.76
CIT-201ENST00000261833 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
CIT-201ENST00000261833 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
CIT-201ENST00000261833 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
CIT-201ENST00000261833 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
CIT-201ENST00000261833 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
CIT-201ENST00000261833 APOBP04114 4563 aaKnown RBP3.83□□□□□ -1.8
CIT-201ENST00000261833 HSPG2P98160 4391 aa3.81□□□□□ -1.8
CIT-201ENST00000261833 SPRR2EP22531 72 aa3.81□□□□□ -1.8
CIT-201ENST00000261833 SPRR2BP35325 72 aa3.81□□□□□ -1.8
CIT-201ENST00000261833 SPRR2AP35326 72 aa3.81□□□□□ -1.8
CIT-201ENST00000261833 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
CIT-201ENST00000261833 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
CIT-201ENST00000261833 SACSQ9NZJ4 4579 aa3.75□□□□□ -1.81
CIT-201ENST00000261833 KRTAP4-1Q9BYQ7 146 aa3.72□□□□□ -1.81
CIT-201ENST00000261833 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
CIT-201ENST00000261833 DYNC1H1Q14204 4646 aaKnown RBP3.69□□□□□ -1.82
CIT-201ENST00000261833 SPRR2DP22532 72 aa3.69□□□□□ -1.82
CIT-201ENST00000261833 MT1HP80294 61 aa3.69□□□□□ -1.82
CIT-201ENST00000261833 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
CIT-201ENST00000261833 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
CIT-201ENST00000261833 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
CIT-201ENST00000261833 MT2AP02795 61 aa3.6□□□□□ -1.83
CIT-201ENST00000261833 FAT1Q14517 4588 aa3.59□□□□□ -1.83
CIT-201ENST00000261833 LCE2BO14633 110 aa3.58□□□□□ -1.84
CIT-201ENST00000261833 FAT3Q8TDW7 4589 aa3.55□□□□□ -1.84
CIT-201ENST00000261833 MT1FP04733 61 aa3.54□□□□□ -1.84
CIT-201ENST00000261833 LCE3BQ5TA77 95 aa3.54□□□□□ -1.84
CIT-201ENST00000261833 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
CIT-201ENST00000261833 LPAP08519 4548 aa3.52□□□□□ -1.85
CIT-201ENST00000261833 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
CIT-201ENST00000261833 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
CIT-201ENST00000261833 MT1XP80297 61 aa3.46□□□□□ -1.86
CIT-201ENST00000261833 LCE2CQ5TA81 110 aa3.46□□□□□ -1.86
CIT-201ENST00000261833 LCE2DQ5TA82 110 aaPredicted RBP3.41□□□□□ -1.86
CIT-201ENST00000261833 MT1GP13640 62 aa3.32□□□□□ -1.88
CIT-201ENST00000261833 MT4P47944 62 aa3.31□□□□□ -1.88
CIT-201ENST00000261833 MUC17Q685J3 4493 aa3.3□□□□□ -1.88
CIT-201ENST00000261833 LRP2P98164 4655 aa3.29□□□□□ -1.88
CIT-201ENST00000261833 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
CIT-201ENST00000261833 MT1BP07438 61 aa3.26□□□□□ -1.89
CIT-201ENST00000261833 KRTAP17-1Q9BYP8 105 aa3.24□□□□□ -1.89
CIT-201ENST00000261833 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
CIT-201ENST00000261833 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
CIT-201ENST00000261833 MT1LQ93083 61 aa3.2□□□□□ -1.9
CIT-201ENST00000261833 KRTAP9-6A0A140TA67 174 aa3.19□□□□□ -1.9
CIT-201ENST00000261833 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
CIT-201ENST00000261833 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
CIT-201ENST00000261833 KRTAP9-3Q9BYQ3 159 aa3.17□□□□□ -1.9
CIT-201ENST00000261833 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
CIT-201ENST00000261833 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
CIT-201ENST00000261833 MT1EP04732 61 aa3.12□□□□□ -1.91
CIT-201ENST00000261833 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
CIT-201ENST00000261833 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
CIT-201ENST00000261833 MT3P25713 68 aa3.1□□□□□ -1.91
CIT-201ENST00000261833 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
CIT-201ENST00000261833 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
CIT-201ENST00000261833 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
CIT-201ENST00000261833 DNHD1Q96M86 4753 aa3.04□□□□□ -1.92
CIT-201ENST00000261833 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
CIT-201ENST00000261833 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
CIT-201ENST00000261833 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
CIT-201ENST00000261833 PRM1P04553 51 aa3.03□□□□□ -1.92
CIT-201ENST00000261833 LCE5AQ5TCM9 118 aa3.02□□□□□ -1.93
CIT-201ENST00000261833 KMT2CQ8NEZ4 4911 aaKnown RBP2.99□□□□□ -1.93
CIT-201ENST00000261833 KRTAP9-7A8MTY7 169 aa2.99□□□□□ -1.93
CIT-201ENST00000261833 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms