RNA–Protein interactions for RNA: ENST00000261647.9

TTC19-201, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC19, Length 3,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-201ENST00000261647 C10orf95Q9H7T3 257 aa9.73□□□□□ -0.85
TTC19-201ENST00000261647 HSPG2P98160 4391 aa9.73□□□□□ -0.85
TTC19-201ENST00000261647 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
TTC19-201ENST00000261647 RPL37P61927 97 aaKnown RBP9.72□□□□□ -0.85
TTC19-201ENST00000261647 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.85
TTC19-201ENST00000261647 TPRXLQ17RH7 258 aa9.71□□□□□ -0.85
TTC19-201ENST00000261647 LRP1Q07954 4544 aaKnown RBP9.71□□□□□ -0.86
TTC19-201ENST00000261647 MYCBP2O75592 4640 aa9.69□□□□□ -0.86
TTC19-201ENST00000261647 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
TTC19-201ENST00000261647 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
TTC19-201ENST00000261647 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
TTC19-201ENST00000261647 TNXBP22105 4242 aa9.51□□□□□ -0.89
TTC19-201ENST00000261647 NDUFAF8A1L188 74 aa9.49□□□□□ -0.89
TTC19-201ENST00000261647 S4R3F8 94 aa9.49□□□□□ -0.89
TTC19-201ENST00000261647 A0A1B0GVY2 172 aa9.48□□□□□ -0.89
TTC19-201ENST00000261647 KRTAP12-2P59991 146 aa9.47□□□□□ -0.89
TTC19-201ENST00000261647 LPAP08519 4548 aa9.45□□□□□ -0.9
TTC19-201ENST00000261647 XP32Q5T750 250 aa9.4□□□□□ -0.9
TTC19-201ENST00000261647 KRTAP15-1Q3LI76 137 aa9.39□□□□□ -0.91
TTC19-201ENST00000261647 KMT2CQ8NEZ4 4911 aaKnown RBP9.36□□□□□ -0.91
TTC19-201ENST00000261647 RYR2Q92736 4967 aa9.34□□□□□ -0.91
TTC19-201ENST00000261647 KRTAP12-1P59990 96 aa9.31□□□□□ -0.92
TTC19-201ENST00000261647 LRP2P98164 4655 aa9.24□□□□□ -0.93
TTC19-201ENST00000261647 KRTAP17-1Q9BYP8 105 aa9.18□□□□□ -0.94
TTC19-201ENST00000261647 Q5VSD8 79 aa9.18□□□□□ -0.94
TTC19-201ENST00000261647 RYR1P21817 5038 aa9.05□□□□□ -0.96
TTC19-201ENST00000261647 KIAA1109Q2LD37 5005 aa9.04□□□□□ -0.96
TTC19-201ENST00000261647 M0QZ58 72 aa9.01□□□□□ -0.97
TTC19-201ENST00000261647 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
TTC19-201ENST00000261647 RYR3Q15413 4870 aa8.96□□□□□ -0.97
TTC19-201ENST00000261647 ABCA13Q86UQ4 5058 aa8.93□□□□□ -0.98
TTC19-201ENST00000261647 LORP23490 312 aaPredicted RBP8.89□□□□□ -0.99
TTC19-201ENST00000261647 R4GN34 69 aa8.88□□□□□ -0.99
TTC19-201ENST00000261647 PLAC4Q8WY50 150 aa8.82□□□□□ -1
TTC19-201ENST00000261647 MUC17Q685J3 4493 aa8.68□□□□□ -1.02
TTC19-201ENST00000261647 KRTAP21-3Q3LHN1 58 aa8.67□□□□□ -1.02
TTC19-201ENST00000261647 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
TTC19-201ENST00000261647 KRTAP4-1Q9BYQ7 146 aa8.61□□□□□ -1.03
TTC19-201ENST00000261647 LUZP6Q538Z0 58 aa8.59□□□□□ -1.03
TTC19-201ENST00000261647 A0A0A0MQY5 61 aa8.56□□□□□ -1.04
TTC19-201ENST00000261647 KRTAP4-5Q9BYR2 181 aa8.56□□□□□ -1.04
TTC19-201ENST00000261647 MUC2Q02817 5179 aa8.53□□□□□ -1.04
TTC19-201ENST00000261647 CAMK2N1Q7Z7J9 78 aa8.52□□□□□ -1.05
TTC19-201ENST00000261647 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
TTC19-201ENST00000261647 KRTAP19-2Q3LHN2 52 aa8.37□□□□□ -1.07
TTC19-201ENST00000261647 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
TTC19-201ENST00000261647 PCLOQ9Y6V0 5065 aa8.21□□□□□ -1.1
TTC19-201ENST00000261647 HERC2O95714 4834 aa8.17□□□□□ -1.1
TTC19-201ENST00000261647 FLGP20930 4061 aaPredicted RBP8.17□□□□□ -1.1
TTC19-201ENST00000261647 TNP1P09430 55 aa8.14□□□□□ -1.11
TTC19-201ENST00000261647 J3QL48 77 aa8.13□□□□□ -1.11
TTC19-201ENST00000261647 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
TTC19-201ENST00000261647 HERC1Q15751 4861 aa7.99□□□□□ -1.13
TTC19-201ENST00000261647 SPRR5A0A1B0GTR4 108 aa7.96□□□□□ -1.14
TTC19-201ENST00000261647 BIRC6Q9NR09 4857 aa7.95□□□□□ -1.14
TTC19-201ENST00000261647 KRTAP23-1A1A580 65 aa7.86□□□□□ -1.15
TTC19-201ENST00000261647 LCE3AQ5TA76 89 aa7.79□□□□□ -1.16
TTC19-201ENST00000261647 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
TTC19-201ENST00000261647 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
TTC19-201ENST00000261647 RNF213Q63HN8 5207 aa7.73□□□□□ -1.17
TTC19-201ENST00000261647 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
TTC19-201ENST00000261647 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.18
TTC19-201ENST00000261647 UBR4Q5T4S7 5183 aa7.65□□□□□ -1.19
TTC19-201ENST00000261647 M0R2T5 61 aa7.64□□□□□ -1.19
TTC19-201ENST00000261647 MT1FP04733 61 aa7.54□□□□□ -1.2
TTC19-201ENST00000261647 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
TTC19-201ENST00000261647 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
TTC19-201ENST00000261647 MT1HP80294 61 aa7.49□□□□□ -1.21
TTC19-201ENST00000261647 MT2AP02795 61 aa7.48□□□□□ -1.21
TTC19-201ENST00000261647 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
TTC19-201ENST00000261647 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
TTC19-201ENST00000261647 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
TTC19-201ENST00000261647 MT1XP80297 61 aa7.36□□□□□ -1.23
TTC19-201ENST00000261647 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
TTC19-201ENST00000261647 MT1BP07438 61 aa7.33□□□□□ -1.24
TTC19-201ENST00000261647 INE1O15225 51 aa7.32□□□□□ -1.24
TTC19-201ENST00000261647 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
TTC19-201ENST00000261647 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.24
TTC19-201ENST00000261647 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
TTC19-201ENST00000261647 KMT2DO14686 5537 aa7.15□□□□□ -1.27
TTC19-201ENST00000261647 USH2AO75445 5202 aa7.07□□□□□ -1.28
TTC19-201ENST00000261647 KRTAP9-3Q9BYQ3 159 aa7.03□□□□□ -1.28
TTC19-201ENST00000261647 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
TTC19-201ENST00000261647 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
TTC19-201ENST00000261647 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.31
TTC19-201ENST00000261647 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
TTC19-201ENST00000261647 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
TTC19-201ENST00000261647 LCE2BO14633 110 aa6.79□□□□□ -1.32
TTC19-201ENST00000261647 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
TTC19-201ENST00000261647 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
TTC19-201ENST00000261647 KRTAP2-3P0C7H8 128 aa6.53□□□□□ -1.36
TTC19-201ENST00000261647 KRTAP2-4Q9BYR9 128 aa6.53□□□□□ -1.36
TTC19-201ENST00000261647 KRTAP2-1Q9BYU5 128 aa6.53□□□□□ -1.36
TTC19-201ENST00000261647 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
TTC19-201ENST00000261647 MT1LQ93083 61 aa6.36□□□□□ -1.39
TTC19-201ENST00000261647 MT1EP04732 61 aa6.3□□□□□ -1.4
TTC19-201ENST00000261647 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
TTC19-201ENST00000261647 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
TTC19-201ENST00000261647 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
TTC19-201ENST00000261647 SSPOA2VEC9 5147 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms