RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
SREBF1-201ENST00000261646 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.15
SREBF1-201ENST00000261646 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.15
SREBF1-201ENST00000261646 FAT1Q14517 4588 aa7.89□□□□□ -1.15
SREBF1-201ENST00000261646 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
SREBF1-201ENST00000261646 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
SREBF1-201ENST00000261646 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
SREBF1-201ENST00000261646 DNAH7Q8WXX0 4024 aa7.84□□□□□ -1.15
SREBF1-201ENST00000261646 FRAS1Q86XX4 4008 aa7.82□□□□□ -1.16
SREBF1-201ENST00000261646 DNAH17Q9UFH2 4485 aa7.78□□□□□ -1.16
SREBF1-201ENST00000261646 CMYA5Q8N3K9 4069 aa7.77□□□□□ -1.17
SREBF1-201ENST00000261646 DNAH2Q9P225 4427 aa7.76□□□□□ -1.17
SREBF1-201ENST00000261646 KRTAP10-4P60372 401 aaPredicted RBP7.75□□□□□ -1.17
SREBF1-201ENST00000261646 DNAH3Q8TD57 4116 aa7.7□□□□□ -1.18
SREBF1-201ENST00000261646 DNAH6Q9C0G6 4158 aa7.68□□□□□ -1.18
SREBF1-201ENST00000261646 MYCBP2O75592 4640 aa7.67□□□□□ -1.18
SREBF1-201ENST00000261646 DYNC1H1Q14204 4646 aaKnown RBP7.64□□□□□ -1.19
SREBF1-201ENST00000261646 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
SREBF1-201ENST00000261646 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
SREBF1-201ENST00000261646 HECTD4Q9Y4D8 3996 aa7.55□□□□□ -1.2
SREBF1-201ENST00000261646 DYNC2H1Q8NCM8 4307 aaKnown RBP7.51□□□□□ -1.21
SREBF1-201ENST00000261646 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
SREBF1-201ENST00000261646 HYDINQ4G0P3 5121 aa7.46□□□□□ -1.22
SREBF1-201ENST00000261646 LRP1Q07954 4544 aaKnown RBP7.44□□□□□ -1.22
SREBF1-201ENST00000261646 SACSQ9NZJ4 4579 aa7.43□□□□□ -1.22
SREBF1-201ENST00000261646 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
SREBF1-201ENST00000261646 KIAA1109Q2LD37 5005 aa7.42□□□□□ -1.22
SREBF1-201ENST00000261646 RYR1P21817 5038 aa7.41□□□□□ -1.22
SREBF1-201ENST00000261646 ALMS1Q8TCU4 4167 aa7.39□□□□□ -1.23
SREBF1-201ENST00000261646 PKHD1P08F94 4074 aa7.38□□□□□ -1.23
SREBF1-201ENST00000261646 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
SREBF1-201ENST00000261646 APOBP04114 4563 aaKnown RBP7.33□□□□□ -1.24
SREBF1-201ENST00000261646 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
SREBF1-201ENST00000261646 FAT2Q9NYQ8 4349 aa7.28□□□□□ -1.24
SREBF1-201ENST00000261646 RYR3Q15413 4870 aa7.22□□□□□ -1.25
SREBF1-201ENST00000261646 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
SREBF1-201ENST00000261646 LRP2P98164 4655 aa7.1□□□□□ -1.27
SREBF1-201ENST00000261646 KMT2CQ8NEZ4 4911 aaKnown RBP7.08□□□□□ -1.28
SREBF1-201ENST00000261646 KRTAP4-1Q9BYQ7 146 aa7.05□□□□□ -1.28
SREBF1-201ENST00000261646 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
SREBF1-201ENST00000261646 PKD1P98161 4303 aa7.01□□□□□ -1.29
SREBF1-201ENST00000261646 RYR2Q92736 4967 aa6.99□□□□□ -1.29
SREBF1-201ENST00000261646 INE1O15225 51 aa6.98□□□□□ -1.29
SREBF1-201ENST00000261646 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
SREBF1-201ENST00000261646 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
SREBF1-201ENST00000261646 HSPG2P98160 4391 aa6.88□□□□□ -1.31
SREBF1-201ENST00000261646 LPAP08519 4548 aa6.84□□□□□ -1.31
SREBF1-201ENST00000261646 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
SREBF1-201ENST00000261646 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
SREBF1-201ENST00000261646 HERC2O95714 4834 aa6.76□□□□□ -1.33
SREBF1-201ENST00000261646 EPPK1P58107 5090 aaKnown RBP6.67□□□□□ -1.34
SREBF1-201ENST00000261646 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
SREBF1-201ENST00000261646 BIRC6Q9NR09 4857 aa6.64□□□□□ -1.35
SREBF1-201ENST00000261646 TNXBP22105 4242 aa6.57□□□□□ -1.36
SREBF1-201ENST00000261646 ABCA13Q86UQ4 5058 aa6.51□□□□□ -1.37
SREBF1-201ENST00000261646 MUC2Q02817 5179 aa6.49□□□□□ -1.37
SREBF1-201ENST00000261646 MT1HP80294 61 aa6.43□□□□□ -1.38
SREBF1-201ENST00000261646 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
SREBF1-201ENST00000261646 MT2AP02795 61 aa6.39□□□□□ -1.39
SREBF1-201ENST00000261646 MT1FP04733 61 aa6.39□□□□□ -1.39
SREBF1-201ENST00000261646 KRTAP8-1Q8IUC2 63 aa6.34□□□□□ -1.4
SREBF1-201ENST00000261646 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
SREBF1-201ENST00000261646 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
SREBF1-201ENST00000261646 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
SREBF1-201ENST00000261646 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
SREBF1-201ENST00000261646 RNF213Q63HN8 5207 aa6.28□□□□□ -1.4
SREBF1-201ENST00000261646 FAT4Q6V0I7 4981 aa6.27□□□□□ -1.41
SREBF1-201ENST00000261646 HERC1Q15751 4861 aa6.26□□□□□ -1.41
SREBF1-201ENST00000261646 KRTAP19-2Q3LHN2 52 aa6.19□□□□□ -1.42
SREBF1-201ENST00000261646 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
SREBF1-201ENST00000261646 LCE2CQ5TA81 110 aa6.15□□□□□ -1.42
SREBF1-201ENST00000261646 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
SREBF1-201ENST00000261646 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
SREBF1-201ENST00000261646 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
SREBF1-201ENST00000261646 UBR4Q5T4S7 5183 aa6.06□□□□□ -1.44
SREBF1-201ENST00000261646 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
SREBF1-201ENST00000261646 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
SREBF1-201ENST00000261646 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
SREBF1-201ENST00000261646 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
SREBF1-201ENST00000261646 MT1XP80297 61 aa5.97□□□□□ -1.45
SREBF1-201ENST00000261646 MT1BP07438 61 aa5.97□□□□□ -1.45
SREBF1-201ENST00000261646 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.45
SREBF1-201ENST00000261646 HMCN2Q8NDA2 5059 aa5.9□□□□□ -1.46
SREBF1-201ENST00000261646 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
SREBF1-201ENST00000261646 KRTAP4-8Q9BYQ9 185 aa5.83□□□□□ -1.48
SREBF1-201ENST00000261646 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
SREBF1-201ENST00000261646 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
SREBF1-201ENST00000261646 LCE2BO14633 110 aa5.65□□□□□ -1.5
SREBF1-201ENST00000261646 USH2AO75445 5202 aa5.62□□□□□ -1.51
SREBF1-201ENST00000261646 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
SREBF1-201ENST00000261646 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
SREBF1-201ENST00000261646 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
SREBF1-201ENST00000261646 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
SREBF1-201ENST00000261646 KMT2DO14686 5537 aa5.5□□□□□ -1.53
SREBF1-201ENST00000261646 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
SREBF1-201ENST00000261646 MT1GP13640 62 aa5.46□□□□□ -1.54
SREBF1-201ENST00000261646 LCE3BQ5TA77 95 aa5.4□□□□□ -1.55
SREBF1-201ENST00000261646 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
SREBF1-201ENST00000261646 MT1LQ93083 61 aa5.32□□□□□ -1.56
SREBF1-201ENST00000261646 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms