RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
SLC40A1-201ENST00000261024 SMR3BP02814 79 aaPredicted RBP7.63□□□□□ -1.19
SLC40A1-201ENST00000261024 PKD1P98161 4303 aa7.59□□□□□ -1.19
SLC40A1-201ENST00000261024 KRTAP12-1P59990 96 aa7.53□□□□□ -1.2
SLC40A1-201ENST00000261024 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
SLC40A1-201ENST00000261024 LUZP6Q538Z0 58 aa7.5□□□□□ -1.21
SLC40A1-201ENST00000261024 XP32Q5T750 250 aa7.49□□□□□ -1.21
SLC40A1-201ENST00000261024 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
SLC40A1-201ENST00000261024 PKHD1P08F94 4074 aa7.47□□□□□ -1.21
SLC40A1-201ENST00000261024 FAT1Q14517 4588 aa7.45□□□□□ -1.22
SLC40A1-201ENST00000261024 SACSQ9NZJ4 4579 aa7.45□□□□□ -1.22
SLC40A1-201ENST00000261024 DYNC1H1Q14204 4646 aaKnown RBP7.36□□□□□ -1.23
SLC40A1-201ENST00000261024 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
SLC40A1-201ENST00000261024 MYCBP2O75592 4640 aa7.34□□□□□ -1.23
SLC40A1-201ENST00000261024 HSPG2P98160 4391 aa7.33□□□□□ -1.24
SLC40A1-201ENST00000261024 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
SLC40A1-201ENST00000261024 M0QZ58 72 aa7.28□□□□□ -1.24
SLC40A1-201ENST00000261024 APOBP04114 4563 aaKnown RBP7.27□□□□□ -1.25
SLC40A1-201ENST00000261024 LRP1Q07954 4544 aaKnown RBP7.21□□□□□ -1.26
SLC40A1-201ENST00000261024 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
SLC40A1-201ENST00000261024 KRTAP10-4P60372 401 aaPredicted RBP7.19□□□□□ -1.26
SLC40A1-201ENST00000261024 R4GN34 69 aa7.16□□□□□ -1.26
SLC40A1-201ENST00000261024 LPAP08519 4548 aa7.14□□□□□ -1.27
SLC40A1-201ENST00000261024 KMT2CQ8NEZ4 4911 aaKnown RBP7.01□□□□□ -1.29
SLC40A1-201ENST00000261024 TNXBP22105 4242 aa6.99□□□□□ -1.29
SLC40A1-201ENST00000261024 LRP2P98164 4655 aa6.94□□□□□ -1.3
SLC40A1-201ENST00000261024 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
SLC40A1-201ENST00000261024 CAMK2N1Q7Z7J9 78 aa6.91□□□□□ -1.3
SLC40A1-201ENST00000261024 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
SLC40A1-201ENST00000261024 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
SLC40A1-201ENST00000261024 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
SLC40A1-201ENST00000261024 Q5VSD8 79 aa6.84□□□□□ -1.31
SLC40A1-201ENST00000261024 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.34
SLC40A1-201ENST00000261024 RYR1P21817 5038 aa6.7□□□□□ -1.34
SLC40A1-201ENST00000261024 RYR3Q15413 4870 aa6.69□□□□□ -1.34
SLC40A1-201ENST00000261024 MT1HL1P0DM35 61 aa6.63□□□□□ -1.35
SLC40A1-201ENST00000261024 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
SLC40A1-201ENST00000261024 TNP1P09430 55 aa6.61□□□□□ -1.35
SLC40A1-201ENST00000261024 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
SLC40A1-201ENST00000261024 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
SLC40A1-201ENST00000261024 RYR2Q92736 4967 aa6.55□□□□□ -1.36
SLC40A1-201ENST00000261024 J3QL48 77 aa6.52□□□□□ -1.37
SLC40A1-201ENST00000261024 MUC2Q02817 5179 aa6.52□□□□□ -1.37
SLC40A1-201ENST00000261024 KRTAP4-5Q9BYR2 181 aa6.49□□□□□ -1.37
SLC40A1-201ENST00000261024 ABCA13Q86UQ4 5058 aa6.48□□□□□ -1.37
SLC40A1-201ENST00000261024 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
SLC40A1-201ENST00000261024 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
SLC40A1-201ENST00000261024 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
SLC40A1-201ENST00000261024 KRTAP21-3Q3LHN1 58 aa6.38□□□□□ -1.39
SLC40A1-201ENST00000261024 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
SLC40A1-201ENST00000261024 RNF213Q63HN8 5207 aa6.29□□□□□ -1.4
SLC40A1-201ENST00000261024 INE1O15225 51 aa6.26□□□□□ -1.41
SLC40A1-201ENST00000261024 HERC2O95714 4834 aa6.22□□□□□ -1.41
SLC40A1-201ENST00000261024 HERC1Q15751 4861 aa6.22□□□□□ -1.41
SLC40A1-201ENST00000261024 KRTAP19-2Q3LHN2 52 aa6.21□□□□□ -1.42
SLC40A1-201ENST00000261024 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
SLC40A1-201ENST00000261024 FAT4Q6V0I7 4981 aa6.18□□□□□ -1.42
SLC40A1-201ENST00000261024 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
SLC40A1-201ENST00000261024 FLGP20930 4061 aaPredicted RBP6.07□□□□□ -1.44
SLC40A1-201ENST00000261024 M0R2T5 61 aa6.07□□□□□ -1.44
SLC40A1-201ENST00000261024 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.44
SLC40A1-201ENST00000261024 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
SLC40A1-201ENST00000261024 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
SLC40A1-201ENST00000261024 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
SLC40A1-201ENST00000261024 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
SLC40A1-201ENST00000261024 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
SLC40A1-201ENST00000261024 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
SLC40A1-201ENST00000261024 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
SLC40A1-201ENST00000261024 KRTAP10-10P60014 251 aa5.75□□□□□ -1.49
SLC40A1-201ENST00000261024 BIRC6Q9NR09 4857 aa5.67□□□□□ -1.5
SLC40A1-201ENST00000261024 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
SLC40A1-201ENST00000261024 USH2AO75445 5202 aa5.65□□□□□ -1.5
SLC40A1-201ENST00000261024 KRTAP10-5P60370 271 aa5.65□□□□□ -1.51
SLC40A1-201ENST00000261024 MT1FP04733 61 aa5.64□□□□□ -1.51
SLC40A1-201ENST00000261024 MT1XP80297 61 aa5.62□□□□□ -1.51
SLC40A1-201ENST00000261024 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
SLC40A1-201ENST00000261024 MT2AP02795 61 aa5.58□□□□□ -1.52
SLC40A1-201ENST00000261024 MT1BP07438 61 aa5.52□□□□□ -1.53
SLC40A1-201ENST00000261024 MT1HP80294 61 aa5.52□□□□□ -1.53
SLC40A1-201ENST00000261024 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
SLC40A1-201ENST00000261024 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
SLC40A1-201ENST00000261024 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
SLC40A1-201ENST00000261024 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
SLC40A1-201ENST00000261024 KMT2DO14686 5537 aa5.43□□□□□ -1.54
SLC40A1-201ENST00000261024 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
SLC40A1-201ENST00000261024 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
SLC40A1-201ENST00000261024 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
SLC40A1-201ENST00000261024 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
SLC40A1-201ENST00000261024 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
SLC40A1-201ENST00000261024 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
SLC40A1-201ENST00000261024 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
SLC40A1-201ENST00000261024 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
SLC40A1-201ENST00000261024 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
SLC40A1-201ENST00000261024 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
SLC40A1-201ENST00000261024 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
SLC40A1-201ENST00000261024 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
SLC40A1-201ENST00000261024 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
SLC40A1-201ENST00000261024 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
SLC40A1-201ENST00000261024 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
SLC40A1-201ENST00000261024 LCE2BO14633 110 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms