RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 FLG2Q5D862 2391 aaPredicted RBP12□□□□□ -0.49
PREB-201ENST00000260643 FAT3Q8TDW7 4589 aa11.99□□□□□ -0.49
PREB-201ENST00000260643 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
PREB-201ENST00000260643 KRTAP13-4Q3LI77 160 aa11.95□□□□□ -0.5
PREB-201ENST00000260643 CRIPTQ9P021 101 aa11.94□□□□□ -0.5
PREB-201ENST00000260643 RYR3Q15413 4870 aa11.92□□□□□ -0.5
PREB-201ENST00000260643 KRTAP10-8P60410 259 aa11.87□□□□□ -0.51
PREB-201ENST00000260643 S4R3F8 94 aa11.86□□□□□ -0.51
PREB-201ENST00000260643 TNXBP22105 4242 aa11.83□□□□□ -0.51
PREB-201ENST00000260643 LRP1Q07954 4544 aaKnown RBP11.82□□□□□ -0.52
PREB-201ENST00000260643 XP32Q5T750 250 aa11.8□□□□□ -0.52
PREB-201ENST00000260643 A0A0D9SG42 100 aa11.79□□□□□ -0.52
PREB-201ENST00000260643 HSPG2P98160 4391 aa11.74□□□□□ -0.53
PREB-201ENST00000260643 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
PREB-201ENST00000260643 P0C880 135 aa11.73□□□□□ -0.53
PREB-201ENST00000260643 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
PREB-201ENST00000260643 KRTAP12-2P59991 146 aa11.59□□□□□ -0.55
PREB-201ENST00000260643 Q5VSD8 79 aa11.55□□□□□ -0.56
PREB-201ENST00000260643 KRTAP12-1P59990 96 aa11.52□□□□□ -0.56
PREB-201ENST00000260643 C10orf95Q9H7T3 257 aa11.52□□□□□ -0.56
PREB-201ENST00000260643 SPINT4Q6UDR6 99 aa11.51□□□□□ -0.57
PREB-201ENST00000260643 EPPK1P58107 5090 aaKnown RBP11.5□□□□□ -0.57
PREB-201ENST00000260643 MYCBP2O75592 4640 aa11.47□□□□□ -0.57
PREB-201ENST00000260643 M0QZ58 72 aa11.45□□□□□ -0.58
PREB-201ENST00000260643 KRTAP15-1Q3LI76 137 aa11.39□□□□□ -0.59
PREB-201ENST00000260643 MT1HL1P0DM35 61 aa11.37□□□□□ -0.59
PREB-201ENST00000260643 RYR1P21817 5038 aa11.31□□□□□ -0.6
PREB-201ENST00000260643 KIAA1109Q2LD37 5005 aa11.3□□□□□ -0.6
PREB-201ENST00000260643 KRTAP17-1Q9BYP8 105 aa11.27□□□□□ -0.61
PREB-201ENST00000260643 LPAP08519 4548 aa11.22□□□□□ -0.61
PREB-201ENST00000260643 LRP2P98164 4655 aa11.13□□□□□ -0.63
PREB-201ENST00000260643 BIRC6Q9NR09 4857 aa11.12□□□□□ -0.63
PREB-201ENST00000260643 NDUFAF8A1L188 74 aa11.1□□□□□ -0.63
PREB-201ENST00000260643 R4GN34 69 aa11□□□□□ -0.65
PREB-201ENST00000260643 KRTAP4-5Q9BYR2 181 aa10.98□□□□□ -0.65
PREB-201ENST00000260643 HERC2O95714 4834 aa10.93□□□□□ -0.66
PREB-201ENST00000260643 ABCA13Q86UQ4 5058 aa10.82□□□□□ -0.68
PREB-201ENST00000260643 LORP23490 312 aaPredicted RBP10.8□□□□□ -0.68
PREB-201ENST00000260643 SEC61BP60468 96 aaKnown RBP10.8□□□□□ -0.68
PREB-201ENST00000260643 MUC17Q685J3 4493 aa10.77□□□□□ -0.69
PREB-201ENST00000260643 PLAC4Q8WY50 150 aa10.71□□□□□ -0.69
PREB-201ENST00000260643 KRTAP4-1Q9BYQ7 146 aa10.64□□□□□ -0.71
PREB-201ENST00000260643 PP632Q6XCG6 107 aa10.62□□□□□ -0.71
PREB-201ENST00000260643 KRTAP19-2Q3LHN2 52 aa10.6□□□□□ -0.71
PREB-201ENST00000260643 PCLOQ9Y6V0 5065 aa10.59□□□□□ -0.71
PREB-201ENST00000260643 J3QL48 77 aa10.55□□□□□ -0.72
PREB-201ENST00000260643 CAMK2N1Q7Z7J9 78 aa10.46□□□□□ -0.74
PREB-201ENST00000260643 HERC1Q15751 4861 aa10.29□□□□□ -0.76
PREB-201ENST00000260643 KRTAP23-1A1A580 65 aa10.27□□□□□ -0.77
PREB-201ENST00000260643 LUZP6Q538Z0 58 aa10.26□□□□□ -0.77
PREB-201ENST00000260643 FLGP20930 4061 aaPredicted RBP10.19□□□□□ -0.78
PREB-201ENST00000260643 TNP1P09430 55 aa10.18□□□□□ -0.78
PREB-201ENST00000260643 SPRR5A0A1B0GTR4 108 aa10.05□□□□□ -0.8
PREB-201ENST00000260643 HMCN2Q8NDA2 5059 aa10.05□□□□□ -0.8
PREB-201ENST00000260643 A0A0A0MQY5 61 aa9.97□□□□□ -0.81
PREB-201ENST00000260643 MUC2Q02817 5179 aa9.95□□□□□ -0.82
PREB-201ENST00000260643 SPRR2GQ9BYE4 73 aa9.88□□□□□ -0.83
PREB-201ENST00000260643 LCE2CQ5TA81 110 aa9.79□□□□□ -0.84
PREB-201ENST00000260643 KRTAP19-1Q8IUB9 90 aa9.76□□□□□ -0.85
PREB-201ENST00000260643 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.86
PREB-201ENST00000260643 LCE3AQ5TA76 89 aa9.57□□□□□ -0.88
PREB-201ENST00000260643 RNF213Q63HN8 5207 aa9.53□□□□□ -0.88
PREB-201ENST00000260643 FAT4Q6V0I7 4981 aa9.5□□□□□ -0.89
PREB-201ENST00000260643 MT1HP80294 61 aa9.46□□□□□ -0.89
PREB-201ENST00000260643 KRTAP8-1Q8IUC2 63 aa9.44□□□□□ -0.9
PREB-201ENST00000260643 M0R2T5 61 aa9.43□□□□□ -0.9
PREB-201ENST00000260643 MT2AP02795 61 aa9.41□□□□□ -0.9
PREB-201ENST00000260643 MT1FP04733 61 aa9.41□□□□□ -0.9
PREB-201ENST00000260643 KRTAP19-8Q3LI54 63 aa9.4□□□□□ -0.91
PREB-201ENST00000260643 KRTAP10-10P60014 251 aa9.36□□□□□ -0.91
PREB-201ENST00000260643 KRTAP9-8Q9BYQ0 159 aa9.33□□□□□ -0.92
PREB-201ENST00000260643 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
PREB-201ENST00000260643 MT1XP80297 61 aa9.22□□□□□ -0.93
PREB-201ENST00000260643 MT1BP07438 61 aa9.21□□□□□ -0.94
PREB-201ENST00000260643 KRTAP12-3P60328 96 aa9.13□□□□□ -0.95
PREB-201ENST00000260643 KRTAP10-12P60413 245 aa9.1□□□□□ -0.95
PREB-201ENST00000260643 PRO2289Q9P1D8 64 aa9.1□□□□□ -0.95
PREB-201ENST00000260643 INE1O15225 51 aa9.07□□□□□ -0.96
PREB-201ENST00000260643 KRTAP10-7P60409 375 aaPredicted RBP8.94□□□□□ -0.98
PREB-201ENST00000260643 KRTAP9-3Q9BYQ3 159 aa8.93□□□□□ -0.98
PREB-201ENST00000260643 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
PREB-201ENST00000260643 LCE3CQ5T5A8 94 aa8.63□□□□□ -1.03
PREB-201ENST00000260643 KRTAP19-5Q3LI72 72 aa8.62□□□□□ -1.03
PREB-201ENST00000260643 LCE2BO14633 110 aa8.48□□□□□ -1.05
PREB-201ENST00000260643 KRTAP9-6A8MVA2 160 aa8.32□□□□□ -1.08
PREB-201ENST00000260643 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.09
PREB-201ENST00000260643 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
PREB-201ENST00000260643 KRTAP19-4Q3LI73 84 aa8.25□□□□□ -1.09
PREB-201ENST00000260643 KRTAP2-3P0C7H8 128 aa8.23□□□□□ -1.09
PREB-201ENST00000260643 KRTAP2-4Q9BYR9 128 aa8.23□□□□□ -1.09
PREB-201ENST00000260643 KRTAP2-1Q9BYU5 128 aa8.23□□□□□ -1.09
PREB-201ENST00000260643 KRTAP19-7Q3SYF9 63 aa8.22□□□□□ -1.09
PREB-201ENST00000260643 KMT2DO14686 5537 aa8.18□□□□□ -1.1
PREB-201ENST00000260643 USH2AO75445 5202 aa8.13□□□□□ -1.11
PREB-201ENST00000260643 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
PREB-201ENST00000260643 KRTAP4-7Q9BYR0 210 aa8.04□□□□□ -1.12
PREB-201ENST00000260643 FSIP2Q5CZC0 6907 aa8.01□□□□□ -1.13
PREB-201ENST00000260643 MT1LQ93083 61 aa8□□□□□ -1.13
PREB-201ENST00000260643 KRTAP9-2Q9BYQ4 174 aa7.98□□□□□ -1.13
PREB-201ENST00000260643 MT1EP04732 61 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms