RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
FDX1-201ENST00000260270 K7ERS5 55 aa8.63□□□□□ -1.03
FDX1-201ENST00000260270 KMT2CQ8NEZ4 4911 aaKnown RBP8.63□□□□□ -1.03
FDX1-201ENST00000260270 C9orf92A6NGG3 77 aa8.61□□□□□ -1.03
FDX1-201ENST00000260270 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
FDX1-201ENST00000260270 A0A0D9SG42 100 aa8.58□□□□□ -1.04
FDX1-201ENST00000260270 RYR1P21817 5038 aa8.58□□□□□ -1.04
FDX1-201ENST00000260270 COX6B2Q6YFQ2 88 aa8.57□□□□□ -1.04
FDX1-201ENST00000260270 SMR3BP02814 79 aaPredicted RBP8.54□□□□□ -1.04
FDX1-201ENST00000260270 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
FDX1-201ENST00000260270 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
FDX1-201ENST00000260270 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
FDX1-201ENST00000260270 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
FDX1-201ENST00000260270 RYR3Q15413 4870 aa8.44□□□□□ -1.06
FDX1-201ENST00000260270 XP32Q5T750 250 aa8.39□□□□□ -1.07
FDX1-201ENST00000260270 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
FDX1-201ENST00000260270 KRTAP17-1Q9BYP8 105 aa8.39□□□□□ -1.07
FDX1-201ENST00000260270 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
FDX1-201ENST00000260270 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
FDX1-201ENST00000260270 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
FDX1-201ENST00000260270 Q5VSD8 79 aa8.34□□□□□ -1.07
FDX1-201ENST00000260270 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
FDX1-201ENST00000260270 KRTAP13-4Q3LI77 160 aa8.27□□□□□ -1.09
FDX1-201ENST00000260270 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
FDX1-201ENST00000260270 S4R3F8 94 aa8.15□□□□□ -1.11
FDX1-201ENST00000260270 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
FDX1-201ENST00000260270 LPAP08519 4548 aa8.09□□□□□ -1.11
FDX1-201ENST00000260270 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
FDX1-201ENST00000260270 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
FDX1-201ENST00000260270 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
FDX1-201ENST00000260270 LRP2P98164 4655 aa7.99□□□□□ -1.13
FDX1-201ENST00000260270 A0A0A0MQY5 61 aa7.97□□□□□ -1.13
FDX1-201ENST00000260270 ABCA13Q86UQ4 5058 aa7.92□□□□□ -1.14
FDX1-201ENST00000260270 KRTAP19-2Q3LHN2 52 aa7.91□□□□□ -1.14
FDX1-201ENST00000260270 M0QZ58 72 aa7.91□□□□□ -1.14
FDX1-201ENST00000260270 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
FDX1-201ENST00000260270 LUZP6Q538Z0 58 aa7.79□□□□□ -1.16
FDX1-201ENST00000260270 BIRC6Q9NR09 4857 aa7.75□□□□□ -1.17
FDX1-201ENST00000260270 KRTAP4-5Q9BYR2 181 aa7.74□□□□□ -1.17
FDX1-201ENST00000260270 HERC2O95714 4834 aa7.73□□□□□ -1.17
FDX1-201ENST00000260270 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.17
FDX1-201ENST00000260270 FLGP20930 4061 aaPredicted RBP7.7□□□□□ -1.18
FDX1-201ENST00000260270 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
FDX1-201ENST00000260270 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
FDX1-201ENST00000260270 HERC1Q15751 4861 aa7.63□□□□□ -1.19
FDX1-201ENST00000260270 R4GN34 69 aa7.57□□□□□ -1.2
FDX1-201ENST00000260270 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
FDX1-201ENST00000260270 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
FDX1-201ENST00000260270 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
FDX1-201ENST00000260270 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
FDX1-201ENST00000260270 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
FDX1-201ENST00000260270 J3QL48 77 aa7.27□□□□□ -1.25
FDX1-201ENST00000260270 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
FDX1-201ENST00000260270 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
FDX1-201ENST00000260270 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
FDX1-201ENST00000260270 MUC2Q02817 5179 aa7.08□□□□□ -1.28
FDX1-201ENST00000260270 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
FDX1-201ENST00000260270 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
FDX1-201ENST00000260270 MT1HP80294 61 aa6.97□□□□□ -1.29
FDX1-201ENST00000260270 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
FDX1-201ENST00000260270 TNP1P09430 55 aa6.93□□□□□ -1.3
FDX1-201ENST00000260270 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.31
FDX1-201ENST00000260270 RNF213Q63HN8 5207 aa6.87□□□□□ -1.31
FDX1-201ENST00000260270 MT2AP02795 61 aa6.85□□□□□ -1.31
FDX1-201ENST00000260270 MT1FP04733 61 aa6.82□□□□□ -1.32
FDX1-201ENST00000260270 FAT4Q6V0I7 4981 aa6.79□□□□□ -1.32
FDX1-201ENST00000260270 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
FDX1-201ENST00000260270 MT1BP07438 61 aa6.69□□□□□ -1.34
FDX1-201ENST00000260270 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
FDX1-201ENST00000260270 KRTAP10-5P60370 271 aa6.65□□□□□ -1.35
FDX1-201ENST00000260270 KRTAP9-3Q9BYQ3 159 aa6.63□□□□□ -1.35
FDX1-201ENST00000260270 MT1XP80297 61 aa6.62□□□□□ -1.35
FDX1-201ENST00000260270 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
FDX1-201ENST00000260270 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
FDX1-201ENST00000260270 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
FDX1-201ENST00000260270 M0R2T5 61 aa6.44□□□□□ -1.38
FDX1-201ENST00000260270 INE1O15225 51 aa6.36□□□□□ -1.39
FDX1-201ENST00000260270 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
FDX1-201ENST00000260270 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
FDX1-201ENST00000260270 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
FDX1-201ENST00000260270 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
FDX1-201ENST00000260270 LCE2BO14633 110 aa6.25□□□□□ -1.41
FDX1-201ENST00000260270 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
FDX1-201ENST00000260270 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
FDX1-201ENST00000260270 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
FDX1-201ENST00000260270 KMT2DO14686 5537 aa5.98□□□□□ -1.45
FDX1-201ENST00000260270 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
FDX1-201ENST00000260270 USH2AO75445 5202 aa5.91□□□□□ -1.46
FDX1-201ENST00000260270 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
FDX1-201ENST00000260270 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
FDX1-201ENST00000260270 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
FDX1-201ENST00000260270 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
FDX1-201ENST00000260270 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
FDX1-201ENST00000260270 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
FDX1-201ENST00000260270 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
FDX1-201ENST00000260270 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
FDX1-201ENST00000260270 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
FDX1-201ENST00000260270 MT1EP04732 61 aa5.75□□□□□ -1.49
FDX1-201ENST00000260270 MT1LQ93083 61 aa5.73□□□□□ -1.49
FDX1-201ENST00000260270 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms