RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 M0QZ58 72 aa7.56□□□□□ -1.2
CAB39-201ENST00000258418 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
CAB39-201ENST00000258418 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
CAB39-201ENST00000258418 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
CAB39-201ENST00000258418 ROMO1P60602 79 aa7.54□□□□□ -1.2
CAB39-201ENST00000258418 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
CAB39-201ENST00000258418 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
CAB39-201ENST00000258418 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
CAB39-201ENST00000258418 KIAA1109Q2LD37 5005 aa7.49□□□□□ -1.21
CAB39-201ENST00000258418 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
CAB39-201ENST00000258418 SACSQ9NZJ4 4579 aa7.48□□□□□ -1.21
CAB39-201ENST00000258418 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
CAB39-201ENST00000258418 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.22
CAB39-201ENST00000258418 CAMK2N1Q7Z7J9 78 aa7.43□□□□□ -1.22
CAB39-201ENST00000258418 APOBP04114 4563 aaKnown RBP7.43□□□□□ -1.22
CAB39-201ENST00000258418 RYR1P21817 5038 aa7.42□□□□□ -1.22
CAB39-201ENST00000258418 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
CAB39-201ENST00000258418 KMT2CQ8NEZ4 4911 aaKnown RBP7.37□□□□□ -1.23
CAB39-201ENST00000258418 FAT2Q9NYQ8 4349 aa7.36□□□□□ -1.23
CAB39-201ENST00000258418 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
CAB39-201ENST00000258418 M0R2T5 61 aa7.36□□□□□ -1.23
CAB39-201ENST00000258418 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
CAB39-201ENST00000258418 RYR3Q15413 4870 aa7.32□□□□□ -1.24
CAB39-201ENST00000258418 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
CAB39-201ENST00000258418 TPRXLQ17RH7 258 aa7.28□□□□□ -1.24
CAB39-201ENST00000258418 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
CAB39-201ENST00000258418 PKD1P98161 4303 aa7.26□□□□□ -1.25
CAB39-201ENST00000258418 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
CAB39-201ENST00000258418 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
CAB39-201ENST00000258418 KRTAP17-1Q9BYP8 105 aa7.23□□□□□ -1.25
CAB39-201ENST00000258418 RYR2Q92736 4967 aa7.18□□□□□ -1.26
CAB39-201ENST00000258418 KRTAP3-2Q9BYR7 98 aa7.17□□□□□ -1.26
CAB39-201ENST00000258418 LRP2P98164 4655 aa7.14□□□□□ -1.27
CAB39-201ENST00000258418 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
CAB39-201ENST00000258418 HSPG2P98160 4391 aa7.04□□□□□ -1.28
CAB39-201ENST00000258418 LPAP08519 4548 aa6.97□□□□□ -1.29
CAB39-201ENST00000258418 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
CAB39-201ENST00000258418 PKHD1L1Q86WI1 4243 aa6.91□□□□□ -1.3
CAB39-201ENST00000258418 EPPK1P58107 5090 aaKnown RBP6.89□□□□□ -1.31
CAB39-201ENST00000258418 KRTAP4-1Q9BYQ7 146 aa6.88□□□□□ -1.31
CAB39-201ENST00000258418 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
CAB39-201ENST00000258418 HERC2O95714 4834 aa6.83□□□□□ -1.32
CAB39-201ENST00000258418 TNP1P09430 55 aa6.76□□□□□ -1.33
CAB39-201ENST00000258418 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
CAB39-201ENST00000258418 TNXBP22105 4242 aa6.75□□□□□ -1.33
CAB39-201ENST00000258418 ABCA13Q86UQ4 5058 aa6.74□□□□□ -1.33
CAB39-201ENST00000258418 MUC2Q02817 5179 aa6.68□□□□□ -1.34
CAB39-201ENST00000258418 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
CAB39-201ENST00000258418 PP632Q6XCG6 107 aa6.51□□□□□ -1.37
CAB39-201ENST00000258418 HERC1Q15751 4861 aa6.48□□□□□ -1.37
CAB39-201ENST00000258418 RNF213Q63HN8 5207 aa6.45□□□□□ -1.38
CAB39-201ENST00000258418 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
CAB39-201ENST00000258418 PCLOQ9Y6V0 5065 aa6.32□□□□□ -1.4
CAB39-201ENST00000258418 BIRC6Q9NR09 4857 aa6.31□□□□□ -1.4
CAB39-201ENST00000258418 UBR4Q5T4S7 5183 aa6.23□□□□□ -1.41
CAB39-201ENST00000258418 MT1HP80294 61 aa6.2□□□□□ -1.42
CAB39-201ENST00000258418 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
CAB39-201ENST00000258418 MUC17Q685J3 4493 aa6.16□□□□□ -1.42
CAB39-201ENST00000258418 MT1FP04733 61 aa6.15□□□□□ -1.42
CAB39-201ENST00000258418 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.43
CAB39-201ENST00000258418 MT2AP02795 61 aa6.13□□□□□ -1.43
CAB39-201ENST00000258418 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
CAB39-201ENST00000258418 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
CAB39-201ENST00000258418 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
CAB39-201ENST00000258418 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
CAB39-201ENST00000258418 HMCN2Q8NDA2 5059 aa6.01□□□□□ -1.45
CAB39-201ENST00000258418 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
CAB39-201ENST00000258418 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
CAB39-201ENST00000258418 FSIP2Q5CZC0 6907 aa6.01□□□□□ -1.45
CAB39-201ENST00000258418 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
CAB39-201ENST00000258418 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
CAB39-201ENST00000258418 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
CAB39-201ENST00000258418 USH2AO75445 5202 aa5.77□□□□□ -1.49
CAB39-201ENST00000258418 MT1BP07438 61 aa5.76□□□□□ -1.49
CAB39-201ENST00000258418 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
CAB39-201ENST00000258418 MT1XP80297 61 aa5.73□□□□□ -1.49
CAB39-201ENST00000258418 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
CAB39-201ENST00000258418 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
CAB39-201ENST00000258418 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
CAB39-201ENST00000258418 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
CAB39-201ENST00000258418 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
CAB39-201ENST00000258418 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
CAB39-201ENST00000258418 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
CAB39-201ENST00000258418 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
CAB39-201ENST00000258418 KMT2DO14686 5537 aa5.61□□□□□ -1.51
CAB39-201ENST00000258418 LCE2BO14633 110 aa5.53□□□□□ -1.52
CAB39-201ENST00000258418 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
CAB39-201ENST00000258418 INE1O15225 51 aa5.44□□□□□ -1.54
CAB39-201ENST00000258418 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.54
CAB39-201ENST00000258418 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
CAB39-201ENST00000258418 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
CAB39-201ENST00000258418 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
CAB39-201ENST00000258418 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
CAB39-201ENST00000258418 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
CAB39-201ENST00000258418 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
CAB39-201ENST00000258418 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
CAB39-201ENST00000258418 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
CAB39-201ENST00000258418 MT1GP13640 62 aa5.07□□□□□ -1.6
CAB39-201ENST00000258418 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
CAB39-201ENST00000258418 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms