RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
CDK4-201ENST00000257904 K7ERS5 55 aa8.83□□□□□ -1
CDK4-201ENST00000257904 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
CDK4-201ENST00000257904 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
CDK4-201ENST00000257904 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
CDK4-201ENST00000257904 TNXBP22105 4242 aa8.78□□□□□ -1
CDK4-201ENST00000257904 KRTAP10-8P60410 259 aa8.76□□□□□ -1.01
CDK4-201ENST00000257904 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
CDK4-201ENST00000257904 KRTAP10-6P60371 365 aaPredicted RBP8.74□□□□□ -1.01
CDK4-201ENST00000257904 CRIPTQ9P021 101 aa8.69□□□□□ -1.02
CDK4-201ENST00000257904 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
CDK4-201ENST00000257904 ROMO1P60602 79 aa8.68□□□□□ -1.02
CDK4-201ENST00000257904 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
CDK4-201ENST00000257904 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
CDK4-201ENST00000257904 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
CDK4-201ENST00000257904 S4R3F8 94 aa8.63□□□□□ -1.03
CDK4-201ENST00000257904 MT1HL1P0DM35 61 aa8.61□□□□□ -1.03
CDK4-201ENST00000257904 XP32Q5T750 250 aa8.61□□□□□ -1.03
CDK4-201ENST00000257904 A0A0D9SG42 100 aa8.6□□□□□ -1.03
CDK4-201ENST00000257904 H3BS24 57 aa8.6□□□□□ -1.03
CDK4-201ENST00000257904 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
CDK4-201ENST00000257904 KRTAP4-5Q9BYR2 181 aa8.58□□□□□ -1.04
CDK4-201ENST00000257904 P0C880 135 aa8.53□□□□□ -1.04
CDK4-201ENST00000257904 TPRXLQ17RH7 258 aa8.46□□□□□ -1.05
CDK4-201ENST00000257904 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
CDK4-201ENST00000257904 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
CDK4-201ENST00000257904 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.06
CDK4-201ENST00000257904 HERC2O95714 4834 aa8.39□□□□□ -1.07
CDK4-201ENST00000257904 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
CDK4-201ENST00000257904 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
CDK4-201ENST00000257904 LPAP08519 4548 aa8.33□□□□□ -1.08
CDK4-201ENST00000257904 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
CDK4-201ENST00000257904 J3QL48 77 aa8.27□□□□□ -1.09
CDK4-201ENST00000257904 M0QZ58 72 aa8.26□□□□□ -1.09
CDK4-201ENST00000257904 LRP2P98164 4655 aa8.23□□□□□ -1.09
CDK4-201ENST00000257904 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
CDK4-201ENST00000257904 PCLOQ9Y6V0 5065 aa8.06□□□□□ -1.12
CDK4-201ENST00000257904 R4GN34 69 aa8.01□□□□□ -1.13
CDK4-201ENST00000257904 NDUFAF8A1L188 74 aa8□□□□□ -1.13
CDK4-201ENST00000257904 SEC61BP60468 96 aaKnown RBP7.99□□□□□ -1.13
CDK4-201ENST00000257904 HERC1Q15751 4861 aa7.93□□□□□ -1.14
CDK4-201ENST00000257904 MUC17Q685J3 4493 aa7.92□□□□□ -1.14
CDK4-201ENST00000257904 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
CDK4-201ENST00000257904 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
CDK4-201ENST00000257904 HMCN2Q8NDA2 5059 aa7.85□□□□□ -1.15
CDK4-201ENST00000257904 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
CDK4-201ENST00000257904 KRTAP19-2Q3LHN2 52 aa7.71□□□□□ -1.18
CDK4-201ENST00000257904 MUC2Q02817 5179 aa7.65□□□□□ -1.18
CDK4-201ENST00000257904 PP632Q6XCG6 107 aa7.63□□□□□ -1.19
CDK4-201ENST00000257904 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
CDK4-201ENST00000257904 FLGP20930 4061 aaPredicted RBP7.51□□□□□ -1.21
CDK4-201ENST00000257904 UBR4Q5T4S7 5183 aa7.49□□□□□ -1.21
CDK4-201ENST00000257904 RNF213Q63HN8 5207 aa7.47□□□□□ -1.21
CDK4-201ENST00000257904 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
CDK4-201ENST00000257904 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
CDK4-201ENST00000257904 TNP1P09430 55 aa7.37□□□□□ -1.23
CDK4-201ENST00000257904 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
CDK4-201ENST00000257904 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
CDK4-201ENST00000257904 LCE2DQ5TA82 110 aaPredicted RBP7.3□□□□□ -1.24
CDK4-201ENST00000257904 MT1HP80294 61 aa7.24□□□□□ -1.25
CDK4-201ENST00000257904 M0R2T5 61 aa7.22□□□□□ -1.25
CDK4-201ENST00000257904 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
CDK4-201ENST00000257904 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
CDK4-201ENST00000257904 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
CDK4-201ENST00000257904 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
CDK4-201ENST00000257904 KRTAP9-8Q9BYQ0 159 aa7□□□□□ -1.29
CDK4-201ENST00000257904 MT2AP02795 61 aa6.99□□□□□ -1.29
CDK4-201ENST00000257904 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
CDK4-201ENST00000257904 MT1FP04733 61 aa6.98□□□□□ -1.29
CDK4-201ENST00000257904 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
CDK4-201ENST00000257904 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
CDK4-201ENST00000257904 KRTAP19-8Q3LI54 63 aa6.81□□□□□ -1.32
CDK4-201ENST00000257904 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
CDK4-201ENST00000257904 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
CDK4-201ENST00000257904 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
CDK4-201ENST00000257904 MT1BP07438 61 aa6.72□□□□□ -1.33
CDK4-201ENST00000257904 MT1XP80297 61 aa6.71□□□□□ -1.34
CDK4-201ENST00000257904 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
CDK4-201ENST00000257904 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
CDK4-201ENST00000257904 LCE2BO14633 110 aa6.54□□□□□ -1.36
CDK4-201ENST00000257904 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
CDK4-201ENST00000257904 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
CDK4-201ENST00000257904 INE1O15225 51 aa6.45□□□□□ -1.38
CDK4-201ENST00000257904 USH2AO75445 5202 aa6.37□□□□□ -1.39
CDK4-201ENST00000257904 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
CDK4-201ENST00000257904 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
CDK4-201ENST00000257904 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
CDK4-201ENST00000257904 KMT2DO14686 5537 aa6.09□□□□□ -1.43
CDK4-201ENST00000257904 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
CDK4-201ENST00000257904 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
CDK4-201ENST00000257904 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
CDK4-201ENST00000257904 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
CDK4-201ENST00000257904 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
CDK4-201ENST00000257904 KRTAP19-7Q3SYF9 63 aa5.98□□□□□ -1.45
CDK4-201ENST00000257904 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.46
CDK4-201ENST00000257904 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.46
CDK4-201ENST00000257904 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
CDK4-201ENST00000257904 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.47
CDK4-201ENST00000257904 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
CDK4-201ENST00000257904 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms