RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 DNAH5Q8TE73 4624 aa5.02□□□□□ -1.61
SEMA6A-201ENST00000257414 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
SEMA6A-201ENST00000257414 DYNC2H1Q8NCM8 4307 aaKnown RBP5.01□□□□□ -1.61
SEMA6A-201ENST00000257414 KRTAP12-2P59991 146 aa5.01□□□□□ -1.61
SEMA6A-201ENST00000257414 HECTD4Q9Y4D8 3996 aa5□□□□□ -1.61
SEMA6A-201ENST00000257414 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
SEMA6A-201ENST00000257414 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
SEMA6A-201ENST00000257414 KRTAP12-1P59990 96 aa4.95□□□□□ -1.62
SEMA6A-201ENST00000257414 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
SEMA6A-201ENST00000257414 DNHD1Q96M86 4753 aa4.95□□□□□ -1.62
SEMA6A-201ENST00000257414 DNAH6Q9C0G6 4158 aa4.92□□□□□ -1.62
SEMA6A-201ENST00000257414 FAT1Q14517 4588 aa4.9□□□□□ -1.62
SEMA6A-201ENST00000257414 M0R2T5 61 aa4.9□□□□□ -1.62
SEMA6A-201ENST00000257414 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
SEMA6A-201ENST00000257414 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
SEMA6A-201ENST00000257414 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
SEMA6A-201ENST00000257414 PLAC4Q8WY50 150 aa4.84□□□□□ -1.64
SEMA6A-201ENST00000257414 SACSQ9NZJ4 4579 aa4.81□□□□□ -1.64
SEMA6A-201ENST00000257414 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
SEMA6A-201ENST00000257414 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
SEMA6A-201ENST00000257414 TNP1P09430 55 aa4.78□□□□□ -1.64
SEMA6A-201ENST00000257414 HYDINQ4G0P3 5121 aa4.76□□□□□ -1.65
SEMA6A-201ENST00000257414 FAT2Q9NYQ8 4349 aa4.74□□□□□ -1.65
SEMA6A-201ENST00000257414 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
SEMA6A-201ENST00000257414 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
SEMA6A-201ENST00000257414 PKHD1P08F94 4074 aa4.67□□□□□ -1.66
SEMA6A-201ENST00000257414 PKD1P98161 4303 aa4.65□□□□□ -1.67
SEMA6A-201ENST00000257414 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
SEMA6A-201ENST00000257414 LRP1Q07954 4544 aaKnown RBP4.64□□□□□ -1.67
SEMA6A-201ENST00000257414 KRTAP4-5Q9BYR2 181 aa4.63□□□□□ -1.67
SEMA6A-201ENST00000257414 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
SEMA6A-201ENST00000257414 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
SEMA6A-201ENST00000257414 RYR1P21817 5038 aa4.56□□□□□ -1.68
SEMA6A-201ENST00000257414 KIAA1109Q2LD37 5005 aa4.56□□□□□ -1.68
SEMA6A-201ENST00000257414 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
SEMA6A-201ENST00000257414 RYR2Q92736 4967 aa4.52□□□□□ -1.69
SEMA6A-201ENST00000257414 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
SEMA6A-201ENST00000257414 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
SEMA6A-201ENST00000257414 RYR3Q15413 4870 aa4.48□□□□□ -1.69
SEMA6A-201ENST00000257414 PKHD1L1Q86WI1 4243 aa4.44□□□□□ -1.7
SEMA6A-201ENST00000257414 LRP2P98164 4655 aa4.43□□□□□ -1.7
SEMA6A-201ENST00000257414 HSPG2P98160 4391 aa4.4□□□□□ -1.7
SEMA6A-201ENST00000257414 KMT2CQ8NEZ4 4911 aaKnown RBP4.39□□□□□ -1.71
SEMA6A-201ENST00000257414 TNXBP22105 4242 aa4.34□□□□□ -1.71
SEMA6A-201ENST00000257414 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
SEMA6A-201ENST00000257414 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
SEMA6A-201ENST00000257414 LPAP08519 4548 aa4.26□□□□□ -1.73
SEMA6A-201ENST00000257414 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
SEMA6A-201ENST00000257414 HERC2O95714 4834 aa4.17□□□□□ -1.74
SEMA6A-201ENST00000257414 KRTAP10-12P60413 245 aa4.15□□□□□ -1.74
SEMA6A-201ENST00000257414 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
SEMA6A-201ENST00000257414 EPPK1P58107 5090 aaKnown RBP4.11□□□□□ -1.75
SEMA6A-201ENST00000257414 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
SEMA6A-201ENST00000257414 MT1HP80294 61 aa4.1□□□□□ -1.75
SEMA6A-201ENST00000257414 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
SEMA6A-201ENST00000257414 MT2AP02795 61 aa4.09□□□□□ -1.76
SEMA6A-201ENST00000257414 ABCA13Q86UQ4 5058 aa4.07□□□□□ -1.76
SEMA6A-201ENST00000257414 MT1FP04733 61 aa4.06□□□□□ -1.76
SEMA6A-201ENST00000257414 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
SEMA6A-201ENST00000257414 INE1O15225 51 aa4.01□□□□□ -1.77
SEMA6A-201ENST00000257414 MUC17Q685J3 4493 aa4□□□□□ -1.77
SEMA6A-201ENST00000257414 LCE2CQ5TA81 110 aa3.98□□□□□ -1.77
SEMA6A-201ENST00000257414 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
SEMA6A-201ENST00000257414 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.77
SEMA6A-201ENST00000257414 HERC1Q15751 4861 aa3.95□□□□□ -1.78
SEMA6A-201ENST00000257414 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
SEMA6A-201ENST00000257414 BIRC6Q9NR09 4857 aa3.93□□□□□ -1.78
SEMA6A-201ENST00000257414 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
SEMA6A-201ENST00000257414 MUC2Q02817 5179 aa3.88□□□□□ -1.79
SEMA6A-201ENST00000257414 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
SEMA6A-201ENST00000257414 MT1XP80297 61 aa3.86□□□□□ -1.79
SEMA6A-201ENST00000257414 MT1BP07438 61 aa3.85□□□□□ -1.79
SEMA6A-201ENST00000257414 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
SEMA6A-201ENST00000257414 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
SEMA6A-201ENST00000257414 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
SEMA6A-201ENST00000257414 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
SEMA6A-201ENST00000257414 FAT4Q6V0I7 4981 aa3.77□□□□□ -1.81
SEMA6A-201ENST00000257414 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SEMA6A-201ENST00000257414 HMCN2Q8NDA2 5059 aa3.73□□□□□ -1.81
SEMA6A-201ENST00000257414 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
SEMA6A-201ENST00000257414 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
SEMA6A-201ENST00000257414 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
SEMA6A-201ENST00000257414 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
SEMA6A-201ENST00000257414 KRTAP4-8A0A0G2JLE6 195 aa3.62□□□□□ -1.83
SEMA6A-201ENST00000257414 KRTAP4-8Q9BYQ9 185 aa3.62□□□□□ -1.83
SEMA6A-201ENST00000257414 LCE2BO14633 110 aa3.58□□□□□ -1.84
SEMA6A-201ENST00000257414 KRTAP19-4Q3LI73 84 aa3.5□□□□□ -1.85
SEMA6A-201ENST00000257414 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
SEMA6A-201ENST00000257414 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
SEMA6A-201ENST00000257414 MT1LQ93083 61 aa3.41□□□□□ -1.86
SEMA6A-201ENST00000257414 MT1EP04732 61 aa3.39□□□□□ -1.87
SEMA6A-201ENST00000257414 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
SEMA6A-201ENST00000257414 MT1GP13640 62 aa3.37□□□□□ -1.87
SEMA6A-201ENST00000257414 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
SEMA6A-201ENST00000257414 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.87
SEMA6A-201ENST00000257414 KRTAP9-6A0A140TA67 174 aa3.34□□□□□ -1.88
SEMA6A-201ENST00000257414 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
SEMA6A-201ENST00000257414 USH2AO75445 5202 aa3.3□□□□□ -1.88
SEMA6A-201ENST00000257414 KMT2DO14686 5537 aa3.3□□□□□ -1.88
SEMA6A-201ENST00000257414 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms