RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 ROMO1P60602 79 aa6.95□□□□□ -1.3
H3F3B-201ENST00000254810 KRTAP3-3Q9BYR6 98 aa6.95□□□□□ -1.3
H3F3B-201ENST00000254810 MYCBP2O75592 4640 aa6.95□□□□□ -1.3
H3F3B-201ENST00000254810 DMBT1Q9UGM3 2413 aaPredicted RBP6.9□□□□□ -1.3
H3F3B-201ENST00000254810 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
H3F3B-201ENST00000254810 A0A1B0GVY2 172 aa6.89□□□□□ -1.31
H3F3B-201ENST00000254810 A0A0D9SG42 100 aa6.88□□□□□ -1.31
H3F3B-201ENST00000254810 K7ERS5 55 aa6.88□□□□□ -1.31
H3F3B-201ENST00000254810 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
H3F3B-201ENST00000254810 RYR2Q92736 4967 aa6.87□□□□□ -1.31
H3F3B-201ENST00000254810 P0C880 135 aa6.84□□□□□ -1.32
H3F3B-201ENST00000254810 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
H3F3B-201ENST00000254810 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
H3F3B-201ENST00000254810 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
H3F3B-201ENST00000254810 LPAP08519 4548 aa6.8□□□□□ -1.32
H3F3B-201ENST00000254810 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
H3F3B-201ENST00000254810 S4R3F8 94 aa6.76□□□□□ -1.33
H3F3B-201ENST00000254810 XP32Q5T750 250 aa6.74□□□□□ -1.33
H3F3B-201ENST00000254810 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
H3F3B-201ENST00000254810 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
H3F3B-201ENST00000254810 LRP2P98164 4655 aa6.64□□□□□ -1.35
H3F3B-201ENST00000254810 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
H3F3B-201ENST00000254810 RYR1P21817 5038 aa6.63□□□□□ -1.35
H3F3B-201ENST00000254810 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
H3F3B-201ENST00000254810 Q5VSD8 79 aa6.59□□□□□ -1.35
H3F3B-201ENST00000254810 RYR3Q15413 4870 aa6.57□□□□□ -1.36
H3F3B-201ENST00000254810 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
H3F3B-201ENST00000254810 KIAA1109Q2LD37 5005 aa6.54□□□□□ -1.36
H3F3B-201ENST00000254810 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
H3F3B-201ENST00000254810 NDUFAF8A1L188 74 aa6.48□□□□□ -1.37
H3F3B-201ENST00000254810 ABCA13Q86UQ4 5058 aa6.47□□□□□ -1.37
H3F3B-201ENST00000254810 M0QZ58 72 aa6.42□□□□□ -1.38
H3F3B-201ENST00000254810 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
H3F3B-201ENST00000254810 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
H3F3B-201ENST00000254810 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
H3F3B-201ENST00000254810 R4GN34 69 aa6.27□□□□□ -1.41
H3F3B-201ENST00000254810 KRTAP4-1Q9BYQ7 146 aa6.19□□□□□ -1.42
H3F3B-201ENST00000254810 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
H3F3B-201ENST00000254810 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
H3F3B-201ENST00000254810 MUC2Q02817 5179 aa6.11□□□□□ -1.43
H3F3B-201ENST00000254810 KRTAP19-2Q3LHN2 52 aa6.07□□□□□ -1.44
H3F3B-201ENST00000254810 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
H3F3B-201ENST00000254810 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
H3F3B-201ENST00000254810 HERC2O95714 4834 aa5.95□□□□□ -1.46
H3F3B-201ENST00000254810 PCLOQ9Y6V0 5065 aa5.94□□□□□ -1.46
H3F3B-201ENST00000254810 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
H3F3B-201ENST00000254810 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
H3F3B-201ENST00000254810 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
H3F3B-201ENST00000254810 HERC1Q15751 4861 aa5.87□□□□□ -1.47
H3F3B-201ENST00000254810 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
H3F3B-201ENST00000254810 FAT4Q6V0I7 4981 aa5.81□□□□□ -1.48
H3F3B-201ENST00000254810 J3QL48 77 aa5.8□□□□□ -1.48
H3F3B-201ENST00000254810 TNP1P09430 55 aa5.75□□□□□ -1.49
H3F3B-201ENST00000254810 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
H3F3B-201ENST00000254810 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
H3F3B-201ENST00000254810 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.51
H3F3B-201ENST00000254810 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
H3F3B-201ENST00000254810 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
H3F3B-201ENST00000254810 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
H3F3B-201ENST00000254810 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
H3F3B-201ENST00000254810 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
H3F3B-201ENST00000254810 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
H3F3B-201ENST00000254810 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
H3F3B-201ENST00000254810 MT1FP04733 61 aa5.43□□□□□ -1.54
H3F3B-201ENST00000254810 MT1HP80294 61 aa5.41□□□□□ -1.54
H3F3B-201ENST00000254810 M0R2T5 61 aa5.41□□□□□ -1.54
H3F3B-201ENST00000254810 MT2AP02795 61 aa5.39□□□□□ -1.55
H3F3B-201ENST00000254810 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
H3F3B-201ENST00000254810 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
H3F3B-201ENST00000254810 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
H3F3B-201ENST00000254810 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
H3F3B-201ENST00000254810 MT1XP80297 61 aa5.29□□□□□ -1.56
H3F3B-201ENST00000254810 MT1BP07438 61 aa5.28□□□□□ -1.56
H3F3B-201ENST00000254810 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
H3F3B-201ENST00000254810 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
H3F3B-201ENST00000254810 KRTAP12-3P60328 96 aa5.21□□□□□ -1.58
H3F3B-201ENST00000254810 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
H3F3B-201ENST00000254810 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
H3F3B-201ENST00000254810 PRO2289Q9P1D8 64 aa5.15□□□□□ -1.59
H3F3B-201ENST00000254810 KMT2DO14686 5537 aa5.09□□□□□ -1.59
H3F3B-201ENST00000254810 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.6
H3F3B-201ENST00000254810 INE1O15225 51 aa5.06□□□□□ -1.6
H3F3B-201ENST00000254810 USH2AO75445 5202 aa5.06□□□□□ -1.6
H3F3B-201ENST00000254810 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
H3F3B-201ENST00000254810 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
H3F3B-201ENST00000254810 LCE2BO14633 110 aa4.9□□□□□ -1.62
H3F3B-201ENST00000254810 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
H3F3B-201ENST00000254810 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
H3F3B-201ENST00000254810 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
H3F3B-201ENST00000254810 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
H3F3B-201ENST00000254810 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
H3F3B-201ENST00000254810 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
H3F3B-201ENST00000254810 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
H3F3B-201ENST00000254810 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
H3F3B-201ENST00000254810 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.68
H3F3B-201ENST00000254810 MT1LQ93083 61 aa4.57□□□□□ -1.68
H3F3B-201ENST00000254810 MT1EP04732 61 aa4.54□□□□□ -1.68
H3F3B-201ENST00000254810 SSPOA2VEC9 5147 aa4.53□□□□□ -1.68
H3F3B-201ENST00000254810 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.7
H3F3B-201ENST00000254810 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms