RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
LRP3-201ENST00000253193 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
LRP3-201ENST00000253193 LRP1Q07954 4544 aaKnown RBP9.49□□□□□ -0.89
LRP3-201ENST00000253193 APOBP04114 4563 aaKnown RBP9.49□□□□□ -0.89
LRP3-201ENST00000253193 PKHD1L1Q86WI1 4243 aa9.47□□□□□ -0.89
LRP3-201ENST00000253193 SPINT4Q6UDR6 99 aa9.46□□□□□ -0.9
LRP3-201ENST00000253193 ROMO1P60602 79 aa9.41□□□□□ -0.9
LRP3-201ENST00000253193 HSPG2P98160 4391 aa9.4□□□□□ -0.9
LRP3-201ENST00000253193 P0C880 135 aa9.38□□□□□ -0.91
LRP3-201ENST00000253193 KRTAP13-4Q3LI77 160 aa9.37□□□□□ -0.91
LRP3-201ENST00000253193 KMT2CQ8NEZ4 4911 aaKnown RBP9.37□□□□□ -0.91
LRP3-201ENST00000253193 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
LRP3-201ENST00000253193 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
LRP3-201ENST00000253193 FAT3Q8TDW7 4589 aa9.31□□□□□ -0.92
LRP3-201ENST00000253193 RYR2Q92736 4967 aa9.3□□□□□ -0.92
LRP3-201ENST00000253193 C10orf95Q9H7T3 257 aa9.24□□□□□ -0.93
LRP3-201ENST00000253193 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
LRP3-201ENST00000253193 KIAA1109Q2LD37 5005 aa9.21□□□□□ -0.94
LRP3-201ENST00000253193 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
LRP3-201ENST00000253193 TNXBP22105 4242 aa9.17□□□□□ -0.94
LRP3-201ENST00000253193 MT1HL1P0DM35 61 aa9.17□□□□□ -0.94
LRP3-201ENST00000253193 LPAP08519 4548 aa9.13□□□□□ -0.95
LRP3-201ENST00000253193 J3QL48 77 aa9.13□□□□□ -0.95
LRP3-201ENST00000253193 RYR3Q15413 4870 aa9.12□□□□□ -0.95
LRP3-201ENST00000253193 KRTAP17-1Q9BYP8 105 aa9.12□□□□□ -0.95
LRP3-201ENST00000253193 M0QZ58 72 aa9.11□□□□□ -0.95
LRP3-201ENST00000253193 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
LRP3-201ENST00000253193 R4GN34 69 aa9.1□□□□□ -0.95
LRP3-201ENST00000253193 RYR1P21817 5038 aa9.06□□□□□ -0.96
LRP3-201ENST00000253193 LRP2P98164 4655 aa9□□□□□ -0.97
LRP3-201ENST00000253193 SEC61BP60468 96 aaKnown RBP8.99□□□□□ -0.97
LRP3-201ENST00000253193 KRTAP12-1P59990 96 aa8.97□□□□□ -0.97
LRP3-201ENST00000253193 KRTAP4-5Q9BYR2 181 aa8.92□□□□□ -0.98
LRP3-201ENST00000253193 NDUFAF8A1L188 74 aa8.83□□□□□ -1
LRP3-201ENST00000253193 CAMK2N1Q7Z7J9 78 aa8.79□□□□□ -1
LRP3-201ENST00000253193 KRTAP15-1Q3LI76 137 aa8.78□□□□□ -1
LRP3-201ENST00000253193 EPPK1P58107 5090 aaKnown RBP8.71□□□□□ -1.01
LRP3-201ENST00000253193 ABCA13Q86UQ4 5058 aa8.69□□□□□ -1.02
LRP3-201ENST00000253193 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.03
LRP3-201ENST00000253193 KRTAP4-1Q9BYQ7 146 aa8.58□□□□□ -1.04
LRP3-201ENST00000253193 HERC2O95714 4834 aa8.43□□□□□ -1.06
LRP3-201ENST00000253193 M0R2T5 61 aa8.42□□□□□ -1.06
LRP3-201ENST00000253193 PLAC4Q8WY50 150 aa8.4□□□□□ -1.06
LRP3-201ENST00000253193 MUC2Q02817 5179 aa8.36□□□□□ -1.07
LRP3-201ENST00000253193 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
LRP3-201ENST00000253193 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
LRP3-201ENST00000253193 TNP1P09430 55 aa8.24□□□□□ -1.09
LRP3-201ENST00000253193 PP632Q6XCG6 107 aa8.21□□□□□ -1.09
LRP3-201ENST00000253193 KRTAP19-2Q3LHN2 52 aa8.09□□□□□ -1.11
LRP3-201ENST00000253193 HERC1Q15751 4861 aa8.03□□□□□ -1.12
LRP3-201ENST00000253193 KRTAP10-10P60014 251 aa8□□□□□ -1.13
LRP3-201ENST00000253193 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
LRP3-201ENST00000253193 PCLOQ9Y6V0 5065 aa7.95□□□□□ -1.14
LRP3-201ENST00000253193 FLGP20930 4061 aaPredicted RBP7.93□□□□□ -1.14
LRP3-201ENST00000253193 BIRC6Q9NR09 4857 aa7.9□□□□□ -1.15
LRP3-201ENST00000253193 A0A0A0MQY5 61 aa7.83□□□□□ -1.16
LRP3-201ENST00000253193 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
LRP3-201ENST00000253193 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
LRP3-201ENST00000253193 HMCN2Q8NDA2 5059 aa7.73□□□□□ -1.17
LRP3-201ENST00000253193 MT1HP80294 61 aa7.71□□□□□ -1.18
LRP3-201ENST00000253193 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
LRP3-201ENST00000253193 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
LRP3-201ENST00000253193 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
LRP3-201ENST00000253193 LCE3AQ5TA76 89 aa7.65□□□□□ -1.18
LRP3-201ENST00000253193 MT1FP04733 61 aa7.63□□□□□ -1.19
LRP3-201ENST00000253193 KRTAP23-1A1A580 65 aa7.62□□□□□ -1.19
LRP3-201ENST00000253193 MT2AP02795 61 aa7.62□□□□□ -1.19
LRP3-201ENST00000253193 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
LRP3-201ENST00000253193 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
LRP3-201ENST00000253193 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
LRP3-201ENST00000253193 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
LRP3-201ENST00000253193 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
LRP3-201ENST00000253193 MT1BP07438 61 aa7.29□□□□□ -1.24
LRP3-201ENST00000253193 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
LRP3-201ENST00000253193 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
LRP3-201ENST00000253193 MT1XP80297 61 aa7.26□□□□□ -1.25
LRP3-201ENST00000253193 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
LRP3-201ENST00000253193 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
LRP3-201ENST00000253193 KRTAP9-3Q9BYQ3 159 aa7.11□□□□□ -1.27
LRP3-201ENST00000253193 USH2AO75445 5202 aa7.02□□□□□ -1.29
LRP3-201ENST00000253193 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
LRP3-201ENST00000253193 KMT2DO14686 5537 aa6.95□□□□□ -1.3
LRP3-201ENST00000253193 LCE2BO14633 110 aa6.9□□□□□ -1.31
LRP3-201ENST00000253193 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
LRP3-201ENST00000253193 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
LRP3-201ENST00000253193 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
LRP3-201ENST00000253193 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
LRP3-201ENST00000253193 INE1O15225 51 aa6.76□□□□□ -1.33
LRP3-201ENST00000253193 KRTAP4-7Q9BYR0 210 aa6.59□□□□□ -1.36
LRP3-201ENST00000253193 LCE2AQ5TA79 106 aaPredicted RBP6.56□□□□□ -1.36
LRP3-201ENST00000253193 KRTAP9-6A8MVA2 160 aa6.55□□□□□ -1.36
LRP3-201ENST00000253193 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
LRP3-201ENST00000253193 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
LRP3-201ENST00000253193 MT1LQ93083 61 aa6.31□□□□□ -1.4
LRP3-201ENST00000253193 MT1EP04732 61 aa6.29□□□□□ -1.4
LRP3-201ENST00000253193 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
LRP3-201ENST00000253193 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
LRP3-201ENST00000253193 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
LRP3-201ENST00000253193 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
LRP3-201ENST00000253193 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms