RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 A8MUU9 505 aa5.43□□□□□ -1.54
COPB1-201ENST00000249923 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
COPB1-201ENST00000249923 H0YAA0 97 aa5.43□□□□□ -1.54
COPB1-201ENST00000249923 KRTAP21-3Q3LHN1 58 aa5.4□□□□□ -1.54
COPB1-201ENST00000249923 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
COPB1-201ENST00000249923 LPAP08519 4548 aa5.39□□□□□ -1.55
COPB1-201ENST00000249923 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
COPB1-201ENST00000249923 KRTAP17-1Q9BYP8 105 aa5.37□□□□□ -1.55
COPB1-201ENST00000249923 RYR1P21817 5038 aa5.37□□□□□ -1.55
COPB1-201ENST00000249923 ROMO1P60602 79 aa5.35□□□□□ -1.55
COPB1-201ENST00000249923 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
COPB1-201ENST00000249923 KIAA1109Q2LD37 5005 aa5.33□□□□□ -1.56
COPB1-201ENST00000249923 COX6B2Q6YFQ2 88 aa5.32□□□□□ -1.56
COPB1-201ENST00000249923 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
COPB1-201ENST00000249923 KRTAP10-8P60410 259 aa5.26□□□□□ -1.57
COPB1-201ENST00000249923 LRP2P98164 4655 aa5.25□□□□□ -1.57
COPB1-201ENST00000249923 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
COPB1-201ENST00000249923 ABCA13Q86UQ4 5058 aa5.25□□□□□ -1.57
COPB1-201ENST00000249923 NDUFAF8A1L188 74 aa5.25□□□□□ -1.57
COPB1-201ENST00000249923 KRTAP3-3Q9BYR6 98 aa5.23□□□□□ -1.57
COPB1-201ENST00000249923 Q5VSD8 79 aa5.2□□□□□ -1.58
COPB1-201ENST00000249923 XP32Q5T750 250 aa5.18□□□□□ -1.58
COPB1-201ENST00000249923 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
COPB1-201ENST00000249923 P0C880 135 aa5.16□□□□□ -1.58
COPB1-201ENST00000249923 S4R3F8 94 aa5.16□□□□□ -1.58
COPB1-201ENST00000249923 MT1HL1P0DM35 61 aa5.15□□□□□ -1.58
COPB1-201ENST00000249923 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
COPB1-201ENST00000249923 KRTAP3-2Q9BYR7 98 aa5.14□□□□□ -1.59
COPB1-201ENST00000249923 TPRXLQ17RH7 258 aa5.11□□□□□ -1.59
COPB1-201ENST00000249923 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
COPB1-201ENST00000249923 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
COPB1-201ENST00000249923 M0QZ58 72 aa5.01□□□□□ -1.61
COPB1-201ENST00000249923 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
COPB1-201ENST00000249923 R4GN34 69 aa4.99□□□□□ -1.61
COPB1-201ENST00000249923 MUC2Q02817 5179 aa4.96□□□□□ -1.62
COPB1-201ENST00000249923 HERC2O95714 4834 aa4.9□□□□□ -1.62
COPB1-201ENST00000249923 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.62
COPB1-201ENST00000249923 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
COPB1-201ENST00000249923 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
COPB1-201ENST00000249923 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
COPB1-201ENST00000249923 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
COPB1-201ENST00000249923 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
COPB1-201ENST00000249923 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
COPB1-201ENST00000249923 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
COPB1-201ENST00000249923 HERC1Q15751 4861 aa4.78□□□□□ -1.64
COPB1-201ENST00000249923 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
COPB1-201ENST00000249923 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
COPB1-201ENST00000249923 BIRC6Q9NR09 4857 aa4.73□□□□□ -1.65
COPB1-201ENST00000249923 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
COPB1-201ENST00000249923 J3QL48 77 aa4.7□□□□□ -1.66
COPB1-201ENST00000249923 FAT4Q6V0I7 4981 aa4.69□□□□□ -1.66
COPB1-201ENST00000249923 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
COPB1-201ENST00000249923 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
COPB1-201ENST00000249923 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
COPB1-201ENST00000249923 UBR4Q5T4S7 5183 aa4.54□□□□□ -1.68
COPB1-201ENST00000249923 M0R2T5 61 aa4.54□□□□□ -1.68
COPB1-201ENST00000249923 TNP1P09430 55 aa4.48□□□□□ -1.69
COPB1-201ENST00000249923 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
COPB1-201ENST00000249923 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
COPB1-201ENST00000249923 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
COPB1-201ENST00000249923 MT1HP80294 61 aa4.3□□□□□ -1.72
COPB1-201ENST00000249923 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
COPB1-201ENST00000249923 MT1FP04733 61 aa4.26□□□□□ -1.73
COPB1-201ENST00000249923 MT2AP02795 61 aa4.23□□□□□ -1.73
COPB1-201ENST00000249923 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
COPB1-201ENST00000249923 KRTAP10-10P60014 251 aa4.23□□□□□ -1.73
COPB1-201ENST00000249923 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
COPB1-201ENST00000249923 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
COPB1-201ENST00000249923 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
COPB1-201ENST00000249923 MT1BP07438 61 aa4.12□□□□□ -1.75
COPB1-201ENST00000249923 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
COPB1-201ENST00000249923 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
COPB1-201ENST00000249923 MT1XP80297 61 aa4.09□□□□□ -1.76
COPB1-201ENST00000249923 USH2AO75445 5202 aa4.09□□□□□ -1.76
COPB1-201ENST00000249923 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
COPB1-201ENST00000249923 KMT2DO14686 5537 aa4.01□□□□□ -1.77
COPB1-201ENST00000249923 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
COPB1-201ENST00000249923 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
COPB1-201ENST00000249923 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
COPB1-201ENST00000249923 PRO2289Q9P1D8 64 aa3.93□□□□□ -1.78
COPB1-201ENST00000249923 LCE2BO14633 110 aa3.91□□□□□ -1.78
COPB1-201ENST00000249923 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
COPB1-201ENST00000249923 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
COPB1-201ENST00000249923 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
COPB1-201ENST00000249923 LCE2AQ5TA79 106 aaPredicted RBP3.82□□□□□ -1.8
COPB1-201ENST00000249923 INE1O15225 51 aa3.8□□□□□ -1.8
COPB1-201ENST00000249923 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
COPB1-201ENST00000249923 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
COPB1-201ENST00000249923 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
COPB1-201ENST00000249923 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
COPB1-201ENST00000249923 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
COPB1-201ENST00000249923 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
COPB1-201ENST00000249923 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
COPB1-201ENST00000249923 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
COPB1-201ENST00000249923 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
COPB1-201ENST00000249923 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
COPB1-201ENST00000249923 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
COPB1-201ENST00000249923 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
COPB1-201ENST00000249923 MT1EP04732 61 aa3.51□□□□□ -1.85
COPB1-201ENST00000249923 MT1LQ93083 61 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms