RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
NEUROD4-201ENST00000242994 KRTAP10-4P60372 401 aaPredicted RBP3.62□□□□□ -1.83
NEUROD4-201ENST00000242994 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
NEUROD4-201ENST00000242994 VPS13DQ5THJ4 4388 aa3.61□□□□□ -1.83
NEUROD4-201ENST00000242994 DNAH7Q8WXX0 4024 aa3.61□□□□□ -1.83
NEUROD4-201ENST00000242994 TNP1P09430 55 aa3.6□□□□□ -1.83
NEUROD4-201ENST00000242994 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
NEUROD4-201ENST00000242994 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
NEUROD4-201ENST00000242994 DNAH17Q9UFH2 4485 aa3.57□□□□□ -1.84
NEUROD4-201ENST00000242994 KRTAP3-3Q9BYR6 98 aa3.57□□□□□ -1.84
NEUROD4-201ENST00000242994 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
NEUROD4-201ENST00000242994 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
NEUROD4-201ENST00000242994 DNAH6Q9C0G6 4158 aa3.55□□□□□ -1.84
NEUROD4-201ENST00000242994 KRTAP4-5Q9BYR2 181 aa3.55□□□□□ -1.84
NEUROD4-201ENST00000242994 CMYA5Q8N3K9 4069 aa3.55□□□□□ -1.84
NEUROD4-201ENST00000242994 KRTAP3-2Q9BYR7 98 aa3.54□□□□□ -1.84
NEUROD4-201ENST00000242994 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
NEUROD4-201ENST00000242994 FAT3Q8TDW7 4589 aa3.53□□□□□ -1.84
NEUROD4-201ENST00000242994 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
NEUROD4-201ENST00000242994 KIAA1109Q2LD37 5005 aa3.51□□□□□ -1.85
NEUROD4-201ENST00000242994 RYR1P21817 5038 aa3.51□□□□□ -1.85
NEUROD4-201ENST00000242994 DNAH3Q8TD57 4116 aa3.49□□□□□ -1.85
NEUROD4-201ENST00000242994 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
NEUROD4-201ENST00000242994 SACSQ9NZJ4 4579 aa3.48□□□□□ -1.85
NEUROD4-201ENST00000242994 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
NEUROD4-201ENST00000242994 HECTD4Q9Y4D8 3996 aa3.46□□□□□ -1.86
NEUROD4-201ENST00000242994 HYDINQ4G0P3 5121 aa3.45□□□□□ -1.86
NEUROD4-201ENST00000242994 PKHD1P08F94 4074 aa3.44□□□□□ -1.86
NEUROD4-201ENST00000242994 DYNC2H1Q8NCM8 4307 aaKnown RBP3.43□□□□□ -1.86
NEUROD4-201ENST00000242994 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
NEUROD4-201ENST00000242994 ALMS1Q8TCU4 4167 aa3.41□□□□□ -1.86
NEUROD4-201ENST00000242994 LORP23490 312 aaPredicted RBP3.41□□□□□ -1.86
NEUROD4-201ENST00000242994 RYR3Q15413 4870 aa3.4□□□□□ -1.87
NEUROD4-201ENST00000242994 FAT2Q9NYQ8 4349 aa3.38□□□□□ -1.87
NEUROD4-201ENST00000242994 LRP2P98164 4655 aa3.34□□□□□ -1.87
NEUROD4-201ENST00000242994 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
NEUROD4-201ENST00000242994 KMT2CQ8NEZ4 4911 aaKnown RBP3.32□□□□□ -1.88
NEUROD4-201ENST00000242994 KRTAP17-1Q9BYP8 105 aa3.31□□□□□ -1.88
NEUROD4-201ENST00000242994 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
NEUROD4-201ENST00000242994 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
NEUROD4-201ENST00000242994 RYR2Q92736 4967 aa3.24□□□□□ -1.89
NEUROD4-201ENST00000242994 PKD1P98161 4303 aa3.2□□□□□ -1.9
NEUROD4-201ENST00000242994 HERC2O95714 4834 aa3.2□□□□□ -1.9
NEUROD4-201ENST00000242994 LPAP08519 4548 aa3.19□□□□□ -1.9
NEUROD4-201ENST00000242994 HSPG2P98160 4391 aa3.17□□□□□ -1.9
NEUROD4-201ENST00000242994 EPPK1P58107 5090 aaKnown RBP3.14□□□□□ -1.91
NEUROD4-201ENST00000242994 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
NEUROD4-201ENST00000242994 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
NEUROD4-201ENST00000242994 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
NEUROD4-201ENST00000242994 MUC2Q02817 5179 aa3.05□□□□□ -1.92
NEUROD4-201ENST00000242994 PCLOQ9Y6V0 5065 aa3.05□□□□□ -1.92
NEUROD4-201ENST00000242994 PKHD1L1Q86WI1 4243 aa3.05□□□□□ -1.92
NEUROD4-201ENST00000242994 MT1HP80294 61 aa3.04□□□□□ -1.92
NEUROD4-201ENST00000242994 ABCA13Q86UQ4 5058 aa3.03□□□□□ -1.92
NEUROD4-201ENST00000242994 MT2AP02795 61 aa3.02□□□□□ -1.93
NEUROD4-201ENST00000242994 MT1FP04733 61 aa3.02□□□□□ -1.93
NEUROD4-201ENST00000242994 TNXBP22105 4242 aa3□□□□□ -1.93
NEUROD4-201ENST00000242994 CRCT1Q9UGL9 99 aa2.99□□□□□ -1.93
NEUROD4-201ENST00000242994 SPRR2GQ9BYE4 73 aa2.98□□□□□ -1.93
NEUROD4-201ENST00000242994 RNF213Q63HN8 5207 aa2.98□□□□□ -1.93
NEUROD4-201ENST00000242994 KRTAP23-1A1A580 65 aa2.96□□□□□ -1.93
NEUROD4-201ENST00000242994 FAT4Q6V0I7 4981 aa2.96□□□□□ -1.94
NEUROD4-201ENST00000242994 KRTAP19-1Q8IUB9 90 aa2.95□□□□□ -1.94
NEUROD4-201ENST00000242994 HERC1Q15751 4861 aa2.95□□□□□ -1.94
NEUROD4-201ENST00000242994 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
NEUROD4-201ENST00000242994 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
NEUROD4-201ENST00000242994 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
NEUROD4-201ENST00000242994 MUC17Q685J3 4493 aa2.87□□□□□ -1.95
NEUROD4-201ENST00000242994 INE1O15225 51 aa2.87□□□□□ -1.95
NEUROD4-201ENST00000242994 LCE2CQ5TA81 110 aa2.86□□□□□ -1.95
NEUROD4-201ENST00000242994 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
NEUROD4-201ENST00000242994 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
NEUROD4-201ENST00000242994 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
NEUROD4-201ENST00000242994 KRTAP19-5Q3LI72 72 aa2.83□□□□□ -1.96
NEUROD4-201ENST00000242994 KRTAP9-8Q9BYQ0 159 aa2.82□□□□□ -1.96
NEUROD4-201ENST00000242994 FLGP20930 4061 aaPredicted RBP2.81□□□□□ -1.96
NEUROD4-201ENST00000242994 MT1XP80297 61 aa2.81□□□□□ -1.96
NEUROD4-201ENST00000242994 MT1BP07438 61 aa2.8□□□□□ -1.96
NEUROD4-201ENST00000242994 KRTAP10-5P60370 271 aa2.79□□□□□ -1.96
NEUROD4-201ENST00000242994 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
NEUROD4-201ENST00000242994 LCE2DQ5TA82 110 aaPredicted RBP2.78□□□□□ -1.96
NEUROD4-201ENST00000242994 HMCN2Q8NDA2 5059 aa2.78□□□□□ -1.96
NEUROD4-201ENST00000242994 KRTAP4-8A0A0G2JLE6 195 aa2.76□□□□□ -1.97
NEUROD4-201ENST00000242994 KRTAP4-8Q9BYQ9 185 aa2.76□□□□□ -1.97
NEUROD4-201ENST00000242994 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
NEUROD4-201ENST00000242994 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
NEUROD4-201ENST00000242994 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.98
NEUROD4-201ENST00000242994 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
NEUROD4-201ENST00000242994 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
NEUROD4-201ENST00000242994 USH2AO75445 5202 aa2.66□□□□□ -1.98
NEUROD4-201ENST00000242994 LCE2BO14633 110 aa2.66□□□□□ -1.98
NEUROD4-201ENST00000242994 SPRR2FQ96RM1 72 aa2.65□□□□□ -1.99
NEUROD4-201ENST00000242994 KRTAP4-7Q9BYR0 210 aa2.64□□□□□ -1.99
NEUROD4-201ENST00000242994 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
NEUROD4-201ENST00000242994 KMT2DO14686 5537 aa2.6□□□□□ -1.99
NEUROD4-201ENST00000242994 MT1GP13640 62 aa2.57□□□□□ -2
NEUROD4-201ENST00000242994 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
NEUROD4-201ENST00000242994 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
NEUROD4-201ENST00000242994 MT1LQ93083 61 aa2.48□□□□□ -2.01
NEUROD4-201ENST00000242994 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms