RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
CDH9-201ENST00000231021 HSPG2P98160 4391 aa2.02□□□□□ -2.09
CDH9-201ENST00000231021 LAMA5O15230 3695 aa2.02□□□□□ -2.09
CDH9-201ENST00000231021 USP9YO00507 2555 aaPredicted RBP2.01□□□□□ -2.09
CDH9-201ENST00000231021 ATMQ13315 3056 aa2.01□□□□□ -2.09
CDH9-201ENST00000231021 M0QZ58 72 aa2.01□□□□□ -2.09
CDH9-201ENST00000231021 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
CDH9-201ENST00000231021 COL12A1Q99715 3063 aa2□□□□□ -2.09
CDH9-201ENST00000231021 RIF1Q5UIP0 2472 aaKnown RBP2□□□□□ -2.09
CDH9-201ENST00000231021 LCE1EQ5T753 118 aa2□□□□□ -2.09
CDH9-201ENST00000231021 CRYBG3Q68DQ2 2970 aa2□□□□□ -2.09
CDH9-201ENST00000231021 SVEP1Q4LDE5 3571 aa2□□□□□ -2.09
CDH9-201ENST00000231021 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
CDH9-201ENST00000231021 KRTAP10-1P60331 282 aa1.98□□□□□ -2.09
CDH9-201ENST00000231021 PKHD1P08F94 4074 aa1.98□□□□□ -2.09
CDH9-201ENST00000231021 VPS13CQ709C8 3753 aa1.97□□□□□ -2.09
CDH9-201ENST00000231021 NOTCH1P46531 2555 aa1.97□□□□□ -2.09
CDH9-201ENST00000231021 ABCA13Q86UQ4 5058 aa1.97□□□□□ -2.09
CDH9-201ENST00000231021 LRRK2Q5S007 2527 aa1.97□□□□□ -2.09
CDH9-201ENST00000231021 SRRM2Q9UQ35 2752 aaKnown RBP1.96□□□□□ -2.1
CDH9-201ENST00000231021 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
CDH9-201ENST00000231021 SMR3AQ99954 134 aa1.96□□□□□ -2.1
CDH9-201ENST00000231021 SACSQ9NZJ4 4579 aa1.96□□□□□ -2.1
CDH9-201ENST00000231021 NBEAL2Q6ZNJ1 2754 aa1.96□□□□□ -2.1
CDH9-201ENST00000231021 KRTAP13-4Q3LI77 160 aa1.96□□□□□ -2.1
CDH9-201ENST00000231021 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
CDH9-201ENST00000231021 ZANQ9Y493 2812 aa1.95□□□□□ -2.1
CDH9-201ENST00000231021 UBR4Q5T4S7 5183 aa1.95□□□□□ -2.1
CDH9-201ENST00000231021 A0A0D9SG42 100 aa1.95□□□□□ -2.1
CDH9-201ENST00000231021 ITPR3Q14573 2671 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 MTORP42345 2549 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 DYNC1H1Q14204 4646 aaKnown RBP1.94□□□□□ -2.1
CDH9-201ENST00000231021 ATRQ13535 2644 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 HIVEP1P15822 2718 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 TENM1Q9UKZ4 2725 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 SONP18583 2426 aaKnown RBP1.94□□□□□ -2.1
CDH9-201ENST00000231021 HECTD1Q9ULT8 2610 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 VPS13BQ7Z7G8 4022 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 KRTAP12-2P59991 146 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 DNAH8Q96JB1 4490 aa1.94□□□□□ -2.1
CDH9-201ENST00000231021 DNAH10Q8IVF4 4471 aa1.93□□□□□ -2.1
CDH9-201ENST00000231021 CFAP46Q8IYW2 2715 aa1.93□□□□□ -2.1
CDH9-201ENST00000231021 DNAH17Q9UFH2 4485 aa1.93□□□□□ -2.1
CDH9-201ENST00000231021 LYSTQ99698 3801 aa1.93□□□□□ -2.1
CDH9-201ENST00000231021 POLQO75417 2590 aa1.92□□□□□ -2.1
CDH9-201ENST00000231021 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
CDH9-201ENST00000231021 CENPEQ02224 2701 aa1.91□□□□□ -2.1
CDH9-201ENST00000231021 HUWE1Q7Z6Z7 4374 aaKnown RBP1.9□□□□□ -2.11
CDH9-201ENST00000231021 PLECQ15149 4684 aaKnown RBP1.89□□□□□ -2.11
CDH9-201ENST00000231021 FLNAP21333 2647 aaKnown RBP1.89□□□□□ -2.11
CDH9-201ENST00000231021 MUC2Q02817 5179 aa1.89□□□□□ -2.11
CDH9-201ENST00000231021 CCDC168Q8NDH2 2452 aa1.89□□□□□ -2.11
CDH9-201ENST00000231021 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
CDH9-201ENST00000231021 MEGF8Q7Z7M0 2845 aa1.88□□□□□ -2.11
CDH9-201ENST00000231021 SPRR5A0A1B0GTR4 108 aa1.88□□□□□ -2.11
CDH9-201ENST00000231021 TRRAPQ9Y4A5 3859 aa1.88□□□□□ -2.11
CDH9-201ENST00000231021 MT3P25713 68 aa1.87□□□□□ -2.11
CDH9-201ENST00000231021 C9orf92A6NGG3 77 aa1.87□□□□□ -2.11
CDH9-201ENST00000231021 FRAS1Q86XX4 4008 aa1.87□□□□□ -2.11
CDH9-201ENST00000231021 NIPBLQ6KC79 2804 aaeCLIP1.86□□□□□ -2.11
CDH9-201ENST00000231021 DNAH9Q9NYC9 4486 aa1.86□□□□□ -2.11
CDH9-201ENST00000231021 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
CDH9-201ENST00000231021 CSMD3Q7Z407 3707 aa1.86□□□□□ -2.11
CDH9-201ENST00000231021 DNAH2Q9P225 4427 aa1.86□□□□□ -2.11
CDH9-201ENST00000231021 VWFP04275 2813 aa1.85□□□□□ -2.11
CDH9-201ENST00000231021 TNXBP22105 4242 aa1.85□□□□□ -2.11
CDH9-201ENST00000231021 ACANP16112 2415 aa1.85□□□□□ -2.11
CDH9-201ENST00000231021 CSMD2Q7Z408 3487 aa1.85□□□□□ -2.11
CDH9-201ENST00000231021 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
CDH9-201ENST00000231021 TENM3Q9P273 2699 aa1.84□□□□□ -2.12
CDH9-201ENST00000231021 DNAH11Q96DT5 4516 aa1.83□□□□□ -2.12
CDH9-201ENST00000231021 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
CDH9-201ENST00000231021 FLNCQ14315 2725 aa1.83□□□□□ -2.12
CDH9-201ENST00000231021 CUBNO60494 3623 aa1.83□□□□□ -2.12
CDH9-201ENST00000231021 TGP01266 2768 aa1.82□□□□□ -2.12
CDH9-201ENST00000231021 KRTAP10-12P60413 245 aa1.81□□□□□ -2.12
CDH9-201ENST00000231021 Q5VSD8 79 aa1.81□□□□□ -2.12
CDH9-201ENST00000231021 PKD1L1Q8TDX9 2849 aa1.81□□□□□ -2.12
CDH9-201ENST00000231021 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
CDH9-201ENST00000231021 ZNF469Q96JG9 3925 aaPredicted RBP1.8□□□□□ -2.12
CDH9-201ENST00000231021 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
CDH9-201ENST00000231021 NEBP20929 6669 aa1.79□□□□□ -2.12
CDH9-201ENST00000231021 DMBT1Q9UGM3 2413 aaPredicted RBP1.79□□□□□ -2.12
CDH9-201ENST00000231021 A0A1B0GVY2 172 aa1.77□□□□□ -2.13
CDH9-201ENST00000231021 STAB2Q8WWQ8 2551 aa1.77□□□□□ -2.13
CDH9-201ENST00000231021 NSD1Q96L73 2696 aaPredicted RBP1.77□□□□□ -2.13
CDH9-201ENST00000231021 TNP1P09430 55 aa1.77□□□□□ -2.13
CDH9-201ENST00000231021 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
CDH9-201ENST00000231021 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
CDH9-201ENST00000231021 MACF1Q9UPN3 7388 aaKnown RBP1.76□□□□□ -2.13
CDH9-201ENST00000231021 STARD9Q9P2P6 4700 aa1.76□□□□□ -2.13
CDH9-201ENST00000231021 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
CDH9-201ENST00000231021 KRTAP10-4P60372 401 aaPredicted RBP1.75□□□□□ -2.13
CDH9-201ENST00000231021 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
CDH9-201ENST00000231021 ITPR2Q14571 2701 aa1.75□□□□□ -2.13
CDH9-201ENST00000231021 NBEAL1Q6ZS30 2694 aa1.75□□□□□ -2.13
CDH9-201ENST00000231021 KRTAP10-7P60409 375 aaPredicted RBP1.75□□□□□ -2.13
CDH9-201ENST00000231021 STAB1Q9NY15 2570 aa1.75□□□□□ -2.13
CDH9-201ENST00000231021 DNAH5Q8TE73 4624 aa1.74□□□□□ -2.13
CDH9-201ENST00000231021 FAT1Q14517 4588 aa1.71□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms