RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 Q6ZSA8 131 aa5.27□□□□□ -1.57
HLA-DOA-201ENST00000229829 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
HLA-DOA-201ENST00000229829 A0A1B0GU33 70 aa5.23□□□□□ -1.57
HLA-DOA-201ENST00000229829 H0YAA0 97 aa5.22□□□□□ -1.57
HLA-DOA-201ENST00000229829 TYMSOSQ8TAI1 123 aa5.22□□□□□ -1.57
HLA-DOA-201ENST00000229829 RYR1P21817 5038 aa5.22□□□□□ -1.57
HLA-DOA-201ENST00000229829 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
HLA-DOA-201ENST00000229829 P0C880 135 aa5.21□□□□□ -1.58
HLA-DOA-201ENST00000229829 A0A0D9SG42 100 aa5.2□□□□□ -1.58
HLA-DOA-201ENST00000229829 EPPK1P58107 5090 aaKnown RBP5.18□□□□□ -1.58
HLA-DOA-201ENST00000229829 SMR3BP02814 79 aaPredicted RBP5.13□□□□□ -1.59
HLA-DOA-201ENST00000229829 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
HLA-DOA-201ENST00000229829 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
HLA-DOA-201ENST00000229829 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
HLA-DOA-201ENST00000229829 KRTAP10-4P60372 401 aaPredicted RBP5.1□□□□□ -1.59
HLA-DOA-201ENST00000229829 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
HLA-DOA-201ENST00000229829 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
HLA-DOA-201ENST00000229829 ABCA13Q86UQ4 5058 aa5.05□□□□□ -1.6
HLA-DOA-201ENST00000229829 C20orf166-AS1Q96NR2 134 aa5.04□□□□□ -1.6
HLA-DOA-201ENST00000229829 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
HLA-DOA-201ENST00000229829 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
HLA-DOA-201ENST00000229829 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
HLA-DOA-201ENST00000229829 RPS29P62273 56 aaKnown RBP5.02□□□□□ -1.61
HLA-DOA-201ENST00000229829 LUZP6Q538Z0 58 aa5□□□□□ -1.61
HLA-DOA-201ENST00000229829 MYCBP2O75592 4640 aa5□□□□□ -1.61
HLA-DOA-201ENST00000229829 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
HLA-DOA-201ENST00000229829 RPL37P61927 97 aaKnown RBP4.99□□□□□ -1.61
HLA-DOA-201ENST00000229829 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
HLA-DOA-201ENST00000229829 KIAA1109Q2LD37 5005 aa4.97□□□□□ -1.61
HLA-DOA-201ENST00000229829 KRTAP17-1Q9BYP8 105 aa4.95□□□□□ -1.62
HLA-DOA-201ENST00000229829 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
HLA-DOA-201ENST00000229829 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
HLA-DOA-201ENST00000229829 LPAP08519 4548 aa4.84□□□□□ -1.63
HLA-DOA-201ENST00000229829 KRTAP10-8P60410 259 aa4.81□□□□□ -1.64
HLA-DOA-201ENST00000229829 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
HLA-DOA-201ENST00000229829 S4R3F8 94 aa4.8□□□□□ -1.64
HLA-DOA-201ENST00000229829 KRTAP10-6P60371 365 aaPredicted RBP4.79□□□□□ -1.64
HLA-DOA-201ENST00000229829 LCE2AQ5TA79 106 aaPredicted RBP4.77□□□□□ -1.65
HLA-DOA-201ENST00000229829 LRP2P98164 4655 aa4.77□□□□□ -1.65
HLA-DOA-201ENST00000229829 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
HLA-DOA-201ENST00000229829 XP32Q5T750 250 aa4.76□□□□□ -1.65
HLA-DOA-201ENST00000229829 Q5VSD8 79 aa4.75□□□□□ -1.65
HLA-DOA-201ENST00000229829 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
HLA-DOA-201ENST00000229829 HERC1Q15751 4861 aa4.71□□□□□ -1.65
HLA-DOA-201ENST00000229829 CAMK2N1Q7Z7J9 78 aa4.71□□□□□ -1.66
HLA-DOA-201ENST00000229829 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
HLA-DOA-201ENST00000229829 LCE2BO14633 110 aa4.66□□□□□ -1.66
HLA-DOA-201ENST00000229829 KRTAP12-1P59990 96 aa4.63□□□□□ -1.67
HLA-DOA-201ENST00000229829 PLAC4Q8WY50 150 aa4.63□□□□□ -1.67
HLA-DOA-201ENST00000229829 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.67
HLA-DOA-201ENST00000229829 M0QZ58 72 aa4.58□□□□□ -1.68
HLA-DOA-201ENST00000229829 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
HLA-DOA-201ENST00000229829 R4GN34 69 aa4.53□□□□□ -1.68
HLA-DOA-201ENST00000229829 MUC2Q02817 5179 aa4.42□□□□□ -1.7
HLA-DOA-201ENST00000229829 LORP23490 312 aaPredicted RBP4.42□□□□□ -1.7
HLA-DOA-201ENST00000229829 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
HLA-DOA-201ENST00000229829 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
HLA-DOA-201ENST00000229829 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
HLA-DOA-201ENST00000229829 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
HLA-DOA-201ENST00000229829 TNP1P09430 55 aa4.14□□□□□ -1.75
HLA-DOA-201ENST00000229829 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
HLA-DOA-201ENST00000229829 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
HLA-DOA-201ENST00000229829 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.76
HLA-DOA-201ENST00000229829 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
HLA-DOA-201ENST00000229829 M0R2T5 61 aa3.93□□□□□ -1.78
HLA-DOA-201ENST00000229829 MT1HP80294 61 aa3.92□□□□□ -1.78
HLA-DOA-201ENST00000229829 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
HLA-DOA-201ENST00000229829 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
HLA-DOA-201ENST00000229829 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
HLA-DOA-201ENST00000229829 INE1O15225 51 aa3.86□□□□□ -1.79
HLA-DOA-201ENST00000229829 MT1FP04733 61 aa3.86□□□□□ -1.79
HLA-DOA-201ENST00000229829 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
HLA-DOA-201ENST00000229829 KRTAP10-10P60014 251 aa3.84□□□□□ -1.8
HLA-DOA-201ENST00000229829 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.8
HLA-DOA-201ENST00000229829 MT2AP02795 61 aa3.83□□□□□ -1.8
HLA-DOA-201ENST00000229829 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
HLA-DOA-201ENST00000229829 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.8
HLA-DOA-201ENST00000229829 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
HLA-DOA-201ENST00000229829 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
HLA-DOA-201ENST00000229829 MT1BP07438 61 aa3.73□□□□□ -1.81
HLA-DOA-201ENST00000229829 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
HLA-DOA-201ENST00000229829 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
HLA-DOA-201ENST00000229829 MT1XP80297 61 aa3.72□□□□□ -1.81
HLA-DOA-201ENST00000229829 SSPOA2VEC9 5147 aa3.71□□□□□ -1.82
HLA-DOA-201ENST00000229829 USH2AO75445 5202 aa3.7□□□□□ -1.82
HLA-DOA-201ENST00000229829 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
HLA-DOA-201ENST00000229829 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
HLA-DOA-201ENST00000229829 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
HLA-DOA-201ENST00000229829 KMT2DO14686 5537 aa3.64□□□□□ -1.83
HLA-DOA-201ENST00000229829 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
HLA-DOA-201ENST00000229829 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
HLA-DOA-201ENST00000229829 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
HLA-DOA-201ENST00000229829 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
HLA-DOA-201ENST00000229829 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
HLA-DOA-201ENST00000229829 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
HLA-DOA-201ENST00000229829 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
HLA-DOA-201ENST00000229829 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
HLA-DOA-201ENST00000229829 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
HLA-DOA-201ENST00000229829 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
HLA-DOA-201ENST00000229829 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms