RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 TYMSOSQ8TAI1 123 aa3.18□□□□□ -1.9
RFX4-201ENST00000229387 SPACA4Q8TDM5 124 aa3.18□□□□□ -1.9
RFX4-201ENST00000229387 HYDINQ4G0P3 5121 aa3.18□□□□□ -1.9
RFX4-201ENST00000229387 DNAH6Q9C0G6 4158 aa3.17□□□□□ -1.9
RFX4-201ENST00000229387 A0A1B0GU33 70 aa3.17□□□□□ -1.9
RFX4-201ENST00000229387 IGKV2D-30A0A075B6S6 120 aa3.17□□□□□ -1.9
RFX4-201ENST00000229387 DNAH17Q9UFH2 4485 aa3.16□□□□□ -1.9
RFX4-201ENST00000229387 H1FX-AS1Q4G0G2 97 aa3.16□□□□□ -1.9
RFX4-201ENST00000229387 DNAH11Q96DT5 4516 aa3.16□□□□□ -1.9
RFX4-201ENST00000229387 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
RFX4-201ENST00000229387 DNAH8Q96JB1 4490 aa3.14□□□□□ -1.91
RFX4-201ENST00000229387 KRTAP13-1Q8IUC0 172 aa3.14□□□□□ -1.91
RFX4-201ENST00000229387 LRP1BQ9NZR2 4599 aa3.13□□□□□ -1.91
RFX4-201ENST00000229387 SMR3BP02814 79 aaPredicted RBP3.12□□□□□ -1.91
RFX4-201ENST00000229387 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
RFX4-201ENST00000229387 SPINK1P00995 79 aa3.11□□□□□ -1.91
RFX4-201ENST00000229387 COX6B2Q6YFQ2 88 aa3.11□□□□□ -1.91
RFX4-201ENST00000229387 HECTD4Q9Y4D8 3996 aa3.09□□□□□ -1.91
RFX4-201ENST00000229387 DNAH5Q8TE73 4624 aa3.08□□□□□ -1.92
RFX4-201ENST00000229387 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
RFX4-201ENST00000229387 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
RFX4-201ENST00000229387 PKHD1P08F94 4074 aa3.07□□□□□ -1.92
RFX4-201ENST00000229387 FAT1Q14517 4588 aa3.07□□□□□ -1.92
RFX4-201ENST00000229387 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
RFX4-201ENST00000229387 RPL37P61927 97 aaKnown RBP3.07□□□□□ -1.92
RFX4-201ENST00000229387 FLG2Q5D862 2391 aaPredicted RBP3.06□□□□□ -1.92
RFX4-201ENST00000229387 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
RFX4-201ENST00000229387 KRTAP13-2Q52LG2 175 aa3.05□□□□□ -1.92
RFX4-201ENST00000229387 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
RFX4-201ENST00000229387 DMBT1Q9UGM3 2413 aaPredicted RBP3.04□□□□□ -1.92
RFX4-201ENST00000229387 KMT2CQ8NEZ4 4911 aaKnown RBP3.03□□□□□ -1.92
RFX4-201ENST00000229387 KRTAP21-3Q3LHN1 58 aa3.03□□□□□ -1.92
RFX4-201ENST00000229387 VPS13BQ7Z7G8 4022 aa3.03□□□□□ -1.92
RFX4-201ENST00000229387 SACSQ9NZJ4 4579 aa3□□□□□ -1.93
RFX4-201ENST00000229387 C9orf92A6NGG3 77 aa3□□□□□ -1.93
RFX4-201ENST00000229387 KRTAP1-4P0C5Y4 121 aa3□□□□□ -1.93
RFX4-201ENST00000229387 DYNC1H1Q14204 4646 aaKnown RBP2.98□□□□□ -1.93
RFX4-201ENST00000229387 PLAC4Q8WY50 150 aa2.98□□□□□ -1.93
RFX4-201ENST00000229387 PKD1P98161 4303 aa2.98□□□□□ -1.93
RFX4-201ENST00000229387 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
RFX4-201ENST00000229387 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
RFX4-201ENST00000229387 MYCBP2O75592 4640 aa2.95□□□□□ -1.94
RFX4-201ENST00000229387 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
RFX4-201ENST00000229387 APOBP04114 4563 aaKnown RBP2.92□□□□□ -1.94
RFX4-201ENST00000229387 S4R3F8 94 aa2.92□□□□□ -1.94
RFX4-201ENST00000229387 RYR3Q15413 4870 aa2.92□□□□□ -1.94
RFX4-201ENST00000229387 KIAA1109Q2LD37 5005 aa2.91□□□□□ -1.94
RFX4-201ENST00000229387 RYR2Q92736 4967 aa2.91□□□□□ -1.94
RFX4-201ENST00000229387 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.95
RFX4-201ENST00000229387 FAT3Q8TDW7 4589 aa2.9□□□□□ -1.95
RFX4-201ENST00000229387 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
RFX4-201ENST00000229387 A0A1B0GVY2 172 aa2.88□□□□□ -1.95
RFX4-201ENST00000229387 A0A0D9SG42 100 aa2.86□□□□□ -1.95
RFX4-201ENST00000229387 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
RFX4-201ENST00000229387 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
RFX4-201ENST00000229387 KRTAP10-4P60372 401 aaPredicted RBP2.85□□□□□ -1.95
RFX4-201ENST00000229387 KRTAP9-3Q9BYQ3 159 aa2.85□□□□□ -1.95
RFX4-201ENST00000229387 Q5VSD8 79 aa2.84□□□□□ -1.95
RFX4-201ENST00000229387 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.96
RFX4-201ENST00000229387 RYR1P21817 5038 aa2.83□□□□□ -1.96
RFX4-201ENST00000229387 INE1O15225 51 aa2.83□□□□□ -1.96
RFX4-201ENST00000229387 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
RFX4-201ENST00000229387 LPAP08519 4548 aa2.82□□□□□ -1.96
RFX4-201ENST00000229387 R4GN34 69 aa2.82□□□□□ -1.96
RFX4-201ENST00000229387 PKHD1L1Q86WI1 4243 aa2.81□□□□□ -1.96
RFX4-201ENST00000229387 HSPG2P98160 4391 aa2.8□□□□□ -1.96
RFX4-201ENST00000229387 LRP2P98164 4655 aa2.78□□□□□ -1.97
RFX4-201ENST00000229387 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
RFX4-201ENST00000229387 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
RFX4-201ENST00000229387 KRTAP10-8P60410 259 aa2.76□□□□□ -1.97
RFX4-201ENST00000229387 PP632Q6XCG6 107 aa2.75□□□□□ -1.97
RFX4-201ENST00000229387 RPS29P62273 56 aaKnown RBP2.74□□□□□ -1.97
RFX4-201ENST00000229387 TNXBP22105 4242 aa2.73□□□□□ -1.97
RFX4-201ENST00000229387 MUC2Q02817 5179 aa2.72□□□□□ -1.97
RFX4-201ENST00000229387 M0QZ58 72 aa2.72□□□□□ -1.97
RFX4-201ENST00000229387 MT1HL1P0DM35 61 aa2.71□□□□□ -1.98
RFX4-201ENST00000229387 HERC2O95714 4834 aa2.66□□□□□ -1.98
RFX4-201ENST00000229387 HERC1Q15751 4861 aa2.62□□□□□ -1.99
RFX4-201ENST00000229387 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
RFX4-201ENST00000229387 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
RFX4-201ENST00000229387 PCLOQ9Y6V0 5065 aa2.57□□□□□ -2
RFX4-201ENST00000229387 RNF213Q63HN8 5207 aa2.57□□□□□ -2
RFX4-201ENST00000229387 LCE1FQ5T754 118 aa2.55□□□□□ -2
RFX4-201ENST00000229387 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
RFX4-201ENST00000229387 BIRC6Q9NR09 4857 aa2.5□□□□□ -2.01
RFX4-201ENST00000229387 MUC17Q685J3 4493 aa2.47□□□□□ -2.01
RFX4-201ENST00000229387 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
RFX4-201ENST00000229387 HMCN2Q8NDA2 5059 aa2.44□□□□□ -2.02
RFX4-201ENST00000229387 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
RFX4-201ENST00000229387 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
RFX4-201ENST00000229387 M0R2T5 61 aa2.41□□□□□ -2.02
RFX4-201ENST00000229387 TNP1P09430 55 aa2.4□□□□□ -2.02
RFX4-201ENST00000229387 KRTAP19-2Q3LHN2 52 aa2.4□□□□□ -2.02
RFX4-201ENST00000229387 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
RFX4-201ENST00000229387 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
RFX4-201ENST00000229387 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
RFX4-201ENST00000229387 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
RFX4-201ENST00000229387 FLGP20930 4061 aaPredicted RBP2.33□□□□□ -2.04
RFX4-201ENST00000229387 USH2AO75445 5202 aa2.32□□□□□ -2.04
RFX4-201ENST00000229387 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms