RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 XP32Q5T750 250 aa7.3□□□□□ -1.24
PRDM4-201ENST00000228437 A0A0A0MQY5 61 aa7.28□□□□□ -1.24
PRDM4-201ENST00000228437 KRTAP12-1P59990 96 aa7.27□□□□□ -1.25
PRDM4-201ENST00000228437 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
PRDM4-201ENST00000228437 KRTAP3-2Q9BYR7 98 aa7.26□□□□□ -1.25
PRDM4-201ENST00000228437 FAT1Q14517 4588 aa7.26□□□□□ -1.25
PRDM4-201ENST00000228437 DNAH3Q8TD57 4116 aa7.24□□□□□ -1.25
PRDM4-201ENST00000228437 HECTD4Q9Y4D8 3996 aa7.24□□□□□ -1.25
PRDM4-201ENST00000228437 KRTAP15-1Q3LI76 137 aa7.24□□□□□ -1.25
PRDM4-201ENST00000228437 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
PRDM4-201ENST00000228437 DNAH5Q8TE73 4624 aa7.2□□□□□ -1.26
PRDM4-201ENST00000228437 MYCBP2O75592 4640 aa7.19□□□□□ -1.26
PRDM4-201ENST00000228437 VPS13BQ7Z7G8 4022 aa7.17□□□□□ -1.26
PRDM4-201ENST00000228437 DYNC1H1Q14204 4646 aaKnown RBP7□□□□□ -1.29
PRDM4-201ENST00000228437 A0A1B0GVY2 172 aa7□□□□□ -1.29
PRDM4-201ENST00000228437 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
PRDM4-201ENST00000228437 M0R2T5 61 aa6.96□□□□□ -1.3
PRDM4-201ENST00000228437 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
PRDM4-201ENST00000228437 APOBP04114 4563 aaKnown RBP6.92□□□□□ -1.3
PRDM4-201ENST00000228437 HYDINQ4G0P3 5121 aa6.92□□□□□ -1.3
PRDM4-201ENST00000228437 LRP1Q07954 4544 aaKnown RBP6.9□□□□□ -1.31
PRDM4-201ENST00000228437 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
PRDM4-201ENST00000228437 SACSQ9NZJ4 4579 aa6.87□□□□□ -1.31
PRDM4-201ENST00000228437 PKHD1P08F94 4074 aa6.86□□□□□ -1.31
PRDM4-201ENST00000228437 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.32
PRDM4-201ENST00000228437 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
PRDM4-201ENST00000228437 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
PRDM4-201ENST00000228437 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
PRDM4-201ENST00000228437 TNP1P09430 55 aa6.78□□□□□ -1.32
PRDM4-201ENST00000228437 KRTAP4-5Q9BYR2 181 aa6.76□□□□□ -1.33
PRDM4-201ENST00000228437 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
PRDM4-201ENST00000228437 KMT2CQ8NEZ4 4911 aaKnown RBP6.74□□□□□ -1.33
PRDM4-201ENST00000228437 RYR1P21817 5038 aa6.7□□□□□ -1.34
PRDM4-201ENST00000228437 RYR3Q15413 4870 aa6.67□□□□□ -1.34
PRDM4-201ENST00000228437 HSPG2P98160 4391 aa6.65□□□□□ -1.34
PRDM4-201ENST00000228437 MT1HL1P0DM35 61 aa6.64□□□□□ -1.35
PRDM4-201ENST00000228437 LRP2P98164 4655 aa6.64□□□□□ -1.35
PRDM4-201ENST00000228437 PKD1P98161 4303 aa6.63□□□□□ -1.35
PRDM4-201ENST00000228437 RYR2Q92736 4967 aa6.49□□□□□ -1.37
PRDM4-201ENST00000228437 LPAP08519 4548 aa6.44□□□□□ -1.38
PRDM4-201ENST00000228437 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
PRDM4-201ENST00000228437 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
PRDM4-201ENST00000228437 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
PRDM4-201ENST00000228437 EPPK1P58107 5090 aaKnown RBP6.35□□□□□ -1.39
PRDM4-201ENST00000228437 HERC2O95714 4834 aa6.31□□□□□ -1.4
PRDM4-201ENST00000228437 KRTAP10-10P60014 251 aa6.24□□□□□ -1.41
PRDM4-201ENST00000228437 TNXBP22105 4242 aa6.19□□□□□ -1.42
PRDM4-201ENST00000228437 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
PRDM4-201ENST00000228437 ABCA13Q86UQ4 5058 aa6.09□□□□□ -1.43
PRDM4-201ENST00000228437 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
PRDM4-201ENST00000228437 MUC2Q02817 5179 aa6.04□□□□□ -1.44
PRDM4-201ENST00000228437 PCLOQ9Y6V0 5065 aa6.01□□□□□ -1.45
PRDM4-201ENST00000228437 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
PRDM4-201ENST00000228437 HERC1Q15751 4861 aa5.98□□□□□ -1.45
PRDM4-201ENST00000228437 RNF213Q63HN8 5207 aa5.93□□□□□ -1.46
PRDM4-201ENST00000228437 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
PRDM4-201ENST00000228437 INE1O15225 51 aa5.91□□□□□ -1.46
PRDM4-201ENST00000228437 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
PRDM4-201ENST00000228437 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
PRDM4-201ENST00000228437 KRTAP10-12P60413 245 aa5.84□□□□□ -1.47
PRDM4-201ENST00000228437 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
PRDM4-201ENST00000228437 UBR4Q5T4S7 5183 aa5.8□□□□□ -1.48
PRDM4-201ENST00000228437 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
PRDM4-201ENST00000228437 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
PRDM4-201ENST00000228437 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
PRDM4-201ENST00000228437 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
PRDM4-201ENST00000228437 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
PRDM4-201ENST00000228437 MT1FP04733 61 aa5.67□□□□□ -1.5
PRDM4-201ENST00000228437 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
PRDM4-201ENST00000228437 MT2AP02795 61 aa5.63□□□□□ -1.51
PRDM4-201ENST00000228437 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
PRDM4-201ENST00000228437 MT1HP80294 61 aa5.59□□□□□ -1.52
PRDM4-201ENST00000228437 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
PRDM4-201ENST00000228437 HMCN2Q8NDA2 5059 aa5.52□□□□□ -1.53
PRDM4-201ENST00000228437 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
PRDM4-201ENST00000228437 MT1XP80297 61 aa5.47□□□□□ -1.53
PRDM4-201ENST00000228437 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
PRDM4-201ENST00000228437 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
PRDM4-201ENST00000228437 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
PRDM4-201ENST00000228437 MT1BP07438 61 aa5.4□□□□□ -1.55
PRDM4-201ENST00000228437 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
PRDM4-201ENST00000228437 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
PRDM4-201ENST00000228437 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
PRDM4-201ENST00000228437 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
PRDM4-201ENST00000228437 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
PRDM4-201ENST00000228437 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
PRDM4-201ENST00000228437 KMT2DO14686 5537 aa5.25□□□□□ -1.57
PRDM4-201ENST00000228437 USH2AO75445 5202 aa5.18□□□□□ -1.58
PRDM4-201ENST00000228437 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
PRDM4-201ENST00000228437 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
PRDM4-201ENST00000228437 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
PRDM4-201ENST00000228437 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
PRDM4-201ENST00000228437 LCE2BO14633 110 aa4.96□□□□□ -1.62
PRDM4-201ENST00000228437 FCGBPQ9Y6R7 5405 aaPredicted RBP4.94□□□□□ -1.62
PRDM4-201ENST00000228437 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
PRDM4-201ENST00000228437 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
PRDM4-201ENST00000228437 MT1GP13640 62 aa4.9□□□□□ -1.63
PRDM4-201ENST00000228437 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
PRDM4-201ENST00000228437 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
PRDM4-201ENST00000228437 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms