RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 STARD9Q9P2P6 4700 aa5.98□□□□□ -1.45
CCND1-201ENST00000227507 LRP1BQ9NZR2 4599 aa5.94□□□□□ -1.46
CCND1-201ENST00000227507 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
CCND1-201ENST00000227507 HECTD4Q9Y4D8 3996 aa5.92□□□□□ -1.46
CCND1-201ENST00000227507 DNAH2Q9P225 4427 aa5.91□□□□□ -1.46
CCND1-201ENST00000227507 DNAH6Q9C0G6 4158 aa5.9□□□□□ -1.46
CCND1-201ENST00000227507 VPS13DQ5THJ4 4388 aa5.88□□□□□ -1.47
CCND1-201ENST00000227507 KRTAP10-6P60371 365 aaPredicted RBP5.85□□□□□ -1.47
CCND1-201ENST00000227507 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
CCND1-201ENST00000227507 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
CCND1-201ENST00000227507 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
CCND1-201ENST00000227507 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
CCND1-201ENST00000227507 VPS13BQ7Z7G8 4022 aa5.78□□□□□ -1.48
CCND1-201ENST00000227507 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
CCND1-201ENST00000227507 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
CCND1-201ENST00000227507 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
CCND1-201ENST00000227507 FAT1Q14517 4588 aa5.71□□□□□ -1.5
CCND1-201ENST00000227507 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
CCND1-201ENST00000227507 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
CCND1-201ENST00000227507 MYCBP2O75592 4640 aa5.65□□□□□ -1.51
CCND1-201ENST00000227507 PKD1P98161 4303 aa5.64□□□□□ -1.51
CCND1-201ENST00000227507 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
CCND1-201ENST00000227507 FAT2Q9NYQ8 4349 aa5.62□□□□□ -1.51
CCND1-201ENST00000227507 DYNC1H1Q14204 4646 aaKnown RBP5.58□□□□□ -1.52
CCND1-201ENST00000227507 PKHD1P08F94 4074 aa5.54□□□□□ -1.52
CCND1-201ENST00000227507 KRTAP10-10P60014 251 aa5.53□□□□□ -1.52
CCND1-201ENST00000227507 SACSQ9NZJ4 4579 aa5.51□□□□□ -1.53
CCND1-201ENST00000227507 TNP1P09430 55 aa5.49□□□□□ -1.53
CCND1-201ENST00000227507 KMT2CQ8NEZ4 4911 aaKnown RBP5.47□□□□□ -1.53
CCND1-201ENST00000227507 KIAA1109Q2LD37 5005 aa5.46□□□□□ -1.53
CCND1-201ENST00000227507 LRP1Q07954 4544 aaKnown RBP5.46□□□□□ -1.54
CCND1-201ENST00000227507 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
CCND1-201ENST00000227507 RYR3Q15413 4870 aa5.45□□□□□ -1.54
CCND1-201ENST00000227507 RYR1P21817 5038 aa5.43□□□□□ -1.54
CCND1-201ENST00000227507 RYR2Q92736 4967 aa5.38□□□□□ -1.55
CCND1-201ENST00000227507 FAT3Q8TDW7 4589 aa5.37□□□□□ -1.55
CCND1-201ENST00000227507 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
CCND1-201ENST00000227507 HSPG2P98160 4391 aa5.35□□□□□ -1.55
CCND1-201ENST00000227507 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
CCND1-201ENST00000227507 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
CCND1-201ENST00000227507 KRTAP17-1Q9BYP8 105 aa5.29□□□□□ -1.56
CCND1-201ENST00000227507 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
CCND1-201ENST00000227507 LRP2P98164 4655 aa5.26□□□□□ -1.57
CCND1-201ENST00000227507 BIRC6Q9NR09 4857 aa5.23□□□□□ -1.57
CCND1-201ENST00000227507 LPAP08519 4548 aa5.18□□□□□ -1.58
CCND1-201ENST00000227507 HERC2O95714 4834 aa5.17□□□□□ -1.58
CCND1-201ENST00000227507 EPPK1P58107 5090 aaKnown RBP5.13□□□□□ -1.59
CCND1-201ENST00000227507 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
CCND1-201ENST00000227507 TNXBP22105 4242 aa5.03□□□□□ -1.6
CCND1-201ENST00000227507 INE1O15225 51 aa5.02□□□□□ -1.61
CCND1-201ENST00000227507 MT1HP80294 61 aa4.97□□□□□ -1.61
CCND1-201ENST00000227507 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
CCND1-201ENST00000227507 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
CCND1-201ENST00000227507 MT2AP02795 61 aa4.83□□□□□ -1.64
CCND1-201ENST00000227507 MUC2Q02817 5179 aa4.83□□□□□ -1.64
CCND1-201ENST00000227507 HERC1Q15751 4861 aa4.82□□□□□ -1.64
CCND1-201ENST00000227507 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
CCND1-201ENST00000227507 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
CCND1-201ENST00000227507 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
CCND1-201ENST00000227507 MT1FP04733 61 aa4.75□□□□□ -1.65
CCND1-201ENST00000227507 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
CCND1-201ENST00000227507 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
CCND1-201ENST00000227507 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
CCND1-201ENST00000227507 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
CCND1-201ENST00000227507 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
CCND1-201ENST00000227507 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
CCND1-201ENST00000227507 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.68
CCND1-201ENST00000227507 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
CCND1-201ENST00000227507 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
CCND1-201ENST00000227507 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
CCND1-201ENST00000227507 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
CCND1-201ENST00000227507 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
CCND1-201ENST00000227507 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
CCND1-201ENST00000227507 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
CCND1-201ENST00000227507 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
CCND1-201ENST00000227507 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
CCND1-201ENST00000227507 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
CCND1-201ENST00000227507 MT1BP07438 61 aa4.38□□□□□ -1.71
CCND1-201ENST00000227507 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
CCND1-201ENST00000227507 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
CCND1-201ENST00000227507 KRTAP10-5P60370 271 aa4.34□□□□□ -1.72
CCND1-201ENST00000227507 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
CCND1-201ENST00000227507 MT1XP80297 61 aa4.3□□□□□ -1.72
CCND1-201ENST00000227507 LCE2BO14633 110 aa4.29□□□□□ -1.72
CCND1-201ENST00000227507 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
CCND1-201ENST00000227507 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
CCND1-201ENST00000227507 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
CCND1-201ENST00000227507 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
CCND1-201ENST00000227507 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
CCND1-201ENST00000227507 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
CCND1-201ENST00000227507 KMT2DO14686 5537 aa4.14□□□□□ -1.75
CCND1-201ENST00000227507 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
CCND1-201ENST00000227507 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
CCND1-201ENST00000227507 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
CCND1-201ENST00000227507 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
CCND1-201ENST00000227507 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
CCND1-201ENST00000227507 USH2AO75445 5202 aa4.08□□□□□ -1.76
CCND1-201ENST00000227507 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
CCND1-201ENST00000227507 SPRR2EP22531 72 aa4.04□□□□□ -1.76
CCND1-201ENST00000227507 SPRR2BP35325 72 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms