RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KIAA1109Q2LD37 5005 aa9.11□□□□□ -0.95
USB1-201ENST00000219281 Q5VSD8 79 aa9.11□□□□□ -0.95
USB1-201ENST00000219281 COX6B2Q6YFQ2 88 aa9.1□□□□□ -0.95
USB1-201ENST00000219281 KRTAP10-8P60410 259 aa9.07□□□□□ -0.96
USB1-201ENST00000219281 EPPK1P58107 5090 aaKnown RBP9.04□□□□□ -0.96
USB1-201ENST00000219281 DMBT1Q9UGM3 2413 aaPredicted RBP8.98□□□□□ -0.97
USB1-201ENST00000219281 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
USB1-201ENST00000219281 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
USB1-201ENST00000219281 KRTAP25-1Q3LHN0 102 aa8.89□□□□□ -0.99
USB1-201ENST00000219281 K7ERS5 55 aa8.88□□□□□ -0.99
USB1-201ENST00000219281 MT1HL1P0DM35 61 aa8.88□□□□□ -0.99
USB1-201ENST00000219281 RPL37P61927 97 aaKnown RBP8.88□□□□□ -0.99
USB1-201ENST00000219281 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
USB1-201ENST00000219281 XP32Q5T750 250 aa8.83□□□□□ -1
USB1-201ENST00000219281 CRIPTQ9P021 101 aa8.8□□□□□ -1
USB1-201ENST00000219281 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
USB1-201ENST00000219281 S4R3F8 94 aa8.79□□□□□ -1
USB1-201ENST00000219281 KRTAP3-2Q9BYR7 98 aa8.78□□□□□ -1
USB1-201ENST00000219281 A0A0D9SG42 100 aa8.75□□□□□ -1.01
USB1-201ENST00000219281 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
USB1-201ENST00000219281 ROMO1P60602 79 aa8.71□□□□□ -1.02
USB1-201ENST00000219281 ABCA13Q86UQ4 5058 aa8.69□□□□□ -1.02
USB1-201ENST00000219281 P0C880 135 aa8.68□□□□□ -1.02
USB1-201ENST00000219281 LRP2P98164 4655 aa8.63□□□□□ -1.03
USB1-201ENST00000219281 LPAP08519 4548 aa8.63□□□□□ -1.03
USB1-201ENST00000219281 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
USB1-201ENST00000219281 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
USB1-201ENST00000219281 HERC2O95714 4834 aa8.51□□□□□ -1.05
USB1-201ENST00000219281 H3BS24 57 aa8.45□□□□□ -1.06
USB1-201ENST00000219281 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
USB1-201ENST00000219281 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
USB1-201ENST00000219281 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
USB1-201ENST00000219281 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
USB1-201ENST00000219281 M0QZ58 72 aa8.36□□□□□ -1.07
USB1-201ENST00000219281 J3QL48 77 aa8.32□□□□□ -1.08
USB1-201ENST00000219281 MUC17Q685J3 4493 aa8.26□□□□□ -1.09
USB1-201ENST00000219281 SEC61BP60468 96 aaKnown RBP8.19□□□□□ -1.1
USB1-201ENST00000219281 KRTAP4-1Q9BYQ7 146 aa8.19□□□□□ -1.1
USB1-201ENST00000219281 PCLOQ9Y6V0 5065 aa8.18□□□□□ -1.1
USB1-201ENST00000219281 R4GN34 69 aa8.17□□□□□ -1.1
USB1-201ENST00000219281 HERC1Q15751 4861 aa8.13□□□□□ -1.11
USB1-201ENST00000219281 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
USB1-201ENST00000219281 MUC2Q02817 5179 aa8.09□□□□□ -1.11
USB1-201ENST00000219281 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
USB1-201ENST00000219281 HMCN2Q8NDA2 5059 aa8.03□□□□□ -1.12
USB1-201ENST00000219281 KRTAP19-2Q3LHN2 52 aa8.02□□□□□ -1.13
USB1-201ENST00000219281 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
USB1-201ENST00000219281 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
USB1-201ENST00000219281 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
USB1-201ENST00000219281 PLAC4Q8WY50 150 aa7.75□□□□□ -1.17
USB1-201ENST00000219281 FAT4Q6V0I7 4981 aa7.72□□□□□ -1.17
USB1-201ENST00000219281 UBR4Q5T4S7 5183 aa7.7□□□□□ -1.18
USB1-201ENST00000219281 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
USB1-201ENST00000219281 LCE2CQ5TA81 110 aa7.66□□□□□ -1.18
USB1-201ENST00000219281 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
USB1-201ENST00000219281 TNP1P09430 55 aa7.48□□□□□ -1.21
USB1-201ENST00000219281 MT1HP80294 61 aa7.44□□□□□ -1.22
USB1-201ENST00000219281 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
USB1-201ENST00000219281 KRTAP23-1A1A580 65 aa7.35□□□□□ -1.23
USB1-201ENST00000219281 M0R2T5 61 aa7.35□□□□□ -1.23
USB1-201ENST00000219281 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
USB1-201ENST00000219281 KRTAP19-1Q8IUB9 90 aa7.28□□□□□ -1.24
USB1-201ENST00000219281 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
USB1-201ENST00000219281 MT2AP02795 61 aa7.24□□□□□ -1.25
USB1-201ENST00000219281 MT1FP04733 61 aa7.23□□□□□ -1.25
USB1-201ENST00000219281 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
USB1-201ENST00000219281 SPRR5A0A1B0GTR4 108 aa7.17□□□□□ -1.26
USB1-201ENST00000219281 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
USB1-201ENST00000219281 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
USB1-201ENST00000219281 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
USB1-201ENST00000219281 KRTAP9-3Q9BYQ3 159 aa6.96□□□□□ -1.3
USB1-201ENST00000219281 MT1BP07438 61 aa6.93□□□□□ -1.3
USB1-201ENST00000219281 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
USB1-201ENST00000219281 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
USB1-201ENST00000219281 MT1XP80297 61 aa6.87□□□□□ -1.31
USB1-201ENST00000219281 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
USB1-201ENST00000219281 KRTAP10-12P60413 245 aa6.76□□□□□ -1.33
USB1-201ENST00000219281 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
USB1-201ENST00000219281 LCE2BO14633 110 aa6.73□□□□□ -1.33
USB1-201ENST00000219281 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.33
USB1-201ENST00000219281 USH2AO75445 5202 aa6.7□□□□□ -1.34
USB1-201ENST00000219281 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
USB1-201ENST00000219281 KRTAP19-5Q3LI72 72 aa6.45□□□□□ -1.38
USB1-201ENST00000219281 KMT2DO14686 5537 aa6.41□□□□□ -1.38
USB1-201ENST00000219281 INE1O15225 51 aa6.37□□□□□ -1.39
USB1-201ENST00000219281 LCE3CQ5T5A8 94 aa6.35□□□□□ -1.39
USB1-201ENST00000219281 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
USB1-201ENST00000219281 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
USB1-201ENST00000219281 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
USB1-201ENST00000219281 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
USB1-201ENST00000219281 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
USB1-201ENST00000219281 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
USB1-201ENST00000219281 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
USB1-201ENST00000219281 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
USB1-201ENST00000219281 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
USB1-201ENST00000219281 LCE2DQ5TA82 110 aaPredicted RBP6.03□□□□□ -1.44
USB1-201ENST00000219281 KRTAP9-6A0A140TA67 174 aa6.01□□□□□ -1.45
USB1-201ENST00000219281 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
USB1-201ENST00000219281 MT1LQ93083 61 aa5.95□□□□□ -1.46
USB1-201ENST00000219281 MT1EP04732 61 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms