RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
SRP54-201ENST00000216774 XP32Q5T750 250 aa6.83□□□□□ -1.32
SRP54-201ENST00000216774 Q5VSD8 79 aa6.83□□□□□ -1.32
SRP54-201ENST00000216774 RYR3Q15413 4870 aa6.82□□□□□ -1.32
SRP54-201ENST00000216774 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
SRP54-201ENST00000216774 LRP1Q07954 4544 aaKnown RBP6.81□□□□□ -1.32
SRP54-201ENST00000216774 S4R3F8 94 aa6.79□□□□□ -1.32
SRP54-201ENST00000216774 HSPG2P98160 4391 aa6.78□□□□□ -1.32
SRP54-201ENST00000216774 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
SRP54-201ENST00000216774 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
SRP54-201ENST00000216774 ROMO1P60602 79 aa6.71□□□□□ -1.33
SRP54-201ENST00000216774 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.34
SRP54-201ENST00000216774 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
SRP54-201ENST00000216774 RYR1P21817 5038 aa6.66□□□□□ -1.34
SRP54-201ENST00000216774 A0A0D9SG42 100 aa6.66□□□□□ -1.34
SRP54-201ENST00000216774 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
SRP54-201ENST00000216774 P0C880 135 aa6.65□□□□□ -1.35
SRP54-201ENST00000216774 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
SRP54-201ENST00000216774 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
SRP54-201ENST00000216774 CRIPTQ9P021 101 aa6.62□□□□□ -1.35
SRP54-201ENST00000216774 EPPK1P58107 5090 aaKnown RBP6.59□□□□□ -1.35
SRP54-201ENST00000216774 TPRXLQ17RH7 258 aa6.59□□□□□ -1.36
SRP54-201ENST00000216774 KRTAP12-2P59991 146 aa6.52□□□□□ -1.37
SRP54-201ENST00000216774 KIAA1109Q2LD37 5005 aa6.51□□□□□ -1.37
SRP54-201ENST00000216774 M0QZ58 72 aa6.51□□□□□ -1.37
SRP54-201ENST00000216774 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
SRP54-201ENST00000216774 LPAP08519 4548 aa6.46□□□□□ -1.38
SRP54-201ENST00000216774 LRP2P98164 4655 aa6.45□□□□□ -1.38
SRP54-201ENST00000216774 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
SRP54-201ENST00000216774 H3BS24 57 aa6.41□□□□□ -1.38
SRP54-201ENST00000216774 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
SRP54-201ENST00000216774 HERC2O95714 4834 aa6.4□□□□□ -1.38
SRP54-201ENST00000216774 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
SRP54-201ENST00000216774 ABCA13Q86UQ4 5058 aa6.3□□□□□ -1.4
SRP54-201ENST00000216774 R4GN34 69 aa6.3□□□□□ -1.4
SRP54-201ENST00000216774 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
SRP54-201ENST00000216774 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
SRP54-201ENST00000216774 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
SRP54-201ENST00000216774 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
SRP54-201ENST00000216774 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
SRP54-201ENST00000216774 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
SRP54-201ENST00000216774 J3QL48 77 aa6.13□□□□□ -1.43
SRP54-201ENST00000216774 KRTAP19-2Q3LHN2 52 aa6.13□□□□□ -1.43
SRP54-201ENST00000216774 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
SRP54-201ENST00000216774 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
SRP54-201ENST00000216774 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
SRP54-201ENST00000216774 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
SRP54-201ENST00000216774 FLGP20930 4061 aaPredicted RBP5.91□□□□□ -1.46
SRP54-201ENST00000216774 HERC1Q15751 4861 aa5.87□□□□□ -1.47
SRP54-201ENST00000216774 MUC2Q02817 5179 aa5.84□□□□□ -1.47
SRP54-201ENST00000216774 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
SRP54-201ENST00000216774 TNP1P09430 55 aa5.78□□□□□ -1.48
SRP54-201ENST00000216774 LCE2CQ5TA81 110 aa5.72□□□□□ -1.49
SRP54-201ENST00000216774 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
SRP54-201ENST00000216774 LUZP6Q538Z0 58 aa5.71□□□□□ -1.5
SRP54-201ENST00000216774 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
SRP54-201ENST00000216774 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
SRP54-201ENST00000216774 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
SRP54-201ENST00000216774 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
SRP54-201ENST00000216774 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
SRP54-201ENST00000216774 M0R2T5 61 aa5.57□□□□□ -1.52
SRP54-201ENST00000216774 MT1HP80294 61 aa5.56□□□□□ -1.52
SRP54-201ENST00000216774 MT2AP02795 61 aa5.49□□□□□ -1.53
SRP54-201ENST00000216774 MT1FP04733 61 aa5.49□□□□□ -1.53
SRP54-201ENST00000216774 KRTAP10-10P60014 251 aa5.48□□□□□ -1.53
SRP54-201ENST00000216774 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
SRP54-201ENST00000216774 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
SRP54-201ENST00000216774 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
SRP54-201ENST00000216774 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
SRP54-201ENST00000216774 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
SRP54-201ENST00000216774 LCE2DQ5TA82 110 aaPredicted RBP5.4□□□□□ -1.55
SRP54-201ENST00000216774 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
SRP54-201ENST00000216774 MT1BP07438 61 aa5.32□□□□□ -1.56
SRP54-201ENST00000216774 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
SRP54-201ENST00000216774 MT1XP80297 61 aa5.31□□□□□ -1.56
SRP54-201ENST00000216774 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
SRP54-201ENST00000216774 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
SRP54-201ENST00000216774 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
SRP54-201ENST00000216774 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
SRP54-201ENST00000216774 KRTAP9-6A0A140TA67 174 aa5.2□□□□□ -1.58
SRP54-201ENST00000216774 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
SRP54-201ENST00000216774 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
SRP54-201ENST00000216774 LCE2AQ5TA79 106 aaPredicted RBP5.11□□□□□ -1.59
SRP54-201ENST00000216774 LCE2BO14633 110 aa4.98□□□□□ -1.61
SRP54-201ENST00000216774 INE1O15225 51 aa4.96□□□□□ -1.62
SRP54-201ENST00000216774 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
SRP54-201ENST00000216774 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
SRP54-201ENST00000216774 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
SRP54-201ENST00000216774 USH2AO75445 5202 aa4.79□□□□□ -1.64
SRP54-201ENST00000216774 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
SRP54-201ENST00000216774 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
SRP54-201ENST00000216774 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
SRP54-201ENST00000216774 KMT2DO14686 5537 aa4.73□□□□□ -1.65
SRP54-201ENST00000216774 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
SRP54-201ENST00000216774 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
SRP54-201ENST00000216774 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
SRP54-201ENST00000216774 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
SRP54-201ENST00000216774 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
SRP54-201ENST00000216774 MT1LQ93083 61 aa4.61□□□□□ -1.67
SRP54-201ENST00000216774 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms