RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 LOC101927531A0A1B0GV80 90 aa9.63□□□□□ -0.87
VTI1B-201ENST00000216456 H0Y9P7 68 aa9.55□□□□□ -0.88
VTI1B-201ENST00000216456 HIST1H4AP62805 103 aaKnown RBP9.55□□□□□ -0.88
VTI1B-201ENST00000216456 IMUPQ9GZP8 106 aa9.55□□□□□ -0.88
VTI1B-201ENST00000216456 CRIPTQ9P021 101 aa9.55□□□□□ -0.88
VTI1B-201ENST00000216456 KMT2DO14686 5537 aa9.52□□□□□ -0.88
VTI1B-201ENST00000216456 KRTAP5-9P26371 169 aa9.52□□□□□ -0.89
VTI1B-201ENST00000216456 UQCRQO14949 82 aa9.5□□□□□ -0.89
VTI1B-201ENST00000216456 NDUFC1O43677 76 aa9.49□□□□□ -0.89
VTI1B-201ENST00000216456 MDN1Q9NU22 5596 aa9.49□□□□□ -0.89
VTI1B-201ENST00000216456 ACYP1P07311 99 aa9.48□□□□□ -0.89
VTI1B-201ENST00000216456 ATP5EP2Q5VTU8 51 aa9.45□□□□□ -0.9
VTI1B-201ENST00000216456 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
VTI1B-201ENST00000216456 H0YAA0 97 aa9.44□□□□□ -0.9
VTI1B-201ENST00000216456 KRTAP20-1Q3LI63 56 aa9.44□□□□□ -0.9
VTI1B-201ENST00000216456 FAM240AA0A1B0GVK7 77 aa9.43□□□□□ -0.9
VTI1B-201ENST00000216456 ATOX1O00244 68 aa9.42□□□□□ -0.9
VTI1B-201ENST00000216456 LINC00208Q96KT6 92 aa9.38□□□□□ -0.91
VTI1B-201ENST00000216456 A8MUN3 132 aa9.34□□□□□ -0.91
VTI1B-201ENST00000216456 MT1XP80297 61 aa9.34□□□□□ -0.91
VTI1B-201ENST00000216456 LINC00643Q86TS7 51 aa9.29□□□□□ -0.92
VTI1B-201ENST00000216456 OCR1Q9BZK8 76 aa9.28□□□□□ -0.92
VTI1B-201ENST00000216456 P0C880 135 aa9.26□□□□□ -0.93
VTI1B-201ENST00000216456 SPRR2FQ96RM1 72 aa9.24□□□□□ -0.93
VTI1B-201ENST00000216456 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
VTI1B-201ENST00000216456 MP68P56378 58 aa9.2□□□□□ -0.94
VTI1B-201ENST00000216456 PRO2289Q9P1D8 64 aa9.2□□□□□ -0.94
VTI1B-201ENST00000216456 PLAC4Q8WY50 150 aa9.19□□□□□ -0.94
VTI1B-201ENST00000216456 R4GN34 69 aa9.16□□□□□ -0.94
VTI1B-201ENST00000216456 SPRR2EP22531 72 aa9.15□□□□□ -0.94
VTI1B-201ENST00000216456 SPRR2BP35325 72 aa9.15□□□□□ -0.94
VTI1B-201ENST00000216456 SPRR2AP35326 72 aa9.15□□□□□ -0.94
VTI1B-201ENST00000216456 M0QZ58 72 aa9.13□□□□□ -0.95
VTI1B-201ENST00000216456 A0A1B0GV90 55 aa9.11□□□□□ -0.95
VTI1B-201ENST00000216456 KRTAP8-1Q8IUC2 63 aa9.11□□□□□ -0.95
VTI1B-201ENST00000216456 KRTAP2-3P0C7H8 128 aa9.1□□□□□ -0.95
VTI1B-201ENST00000216456 KRTAP2-4Q9BYR9 128 aa9.1□□□□□ -0.95
VTI1B-201ENST00000216456 DMAC1Q96GE9 116 aa9.08□□□□□ -0.96
VTI1B-201ENST00000216456 KRTAP4-8A0A0G2JLE6 195 aa9.07□□□□□ -0.96
VTI1B-201ENST00000216456 KRTAP4-8Q9BYQ9 185 aa9.07□□□□□ -0.96
VTI1B-201ENST00000216456 LINC01554Q52M75 96 aa9.06□□□□□ -0.96
VTI1B-201ENST00000216456 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
VTI1B-201ENST00000216456 LCE1AQ5T7P2 110 aa9.01□□□□□ -0.97
VTI1B-201ENST00000216456 C20orf197Q8N268 126 aa9.01□□□□□ -0.97
VTI1B-201ENST00000216456 H3BPC8 53 aa8.99□□□□□ -0.97
VTI1B-201ENST00000216456 KRTAP10-7P60409 375 aaPredicted RBP8.95□□□□□ -0.98
VTI1B-201ENST00000216456 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
VTI1B-201ENST00000216456 SPRR2DP22532 72 aa8.84□□□□□ -0.99
VTI1B-201ENST00000216456 TRAV7A0A075B6U4 112 aa8.82□□□□□ -1
VTI1B-201ENST00000216456 J3QR89 54 aa8.81□□□□□ -1
VTI1B-201ENST00000216456 KRTAP10-12P60413 245 aa8.81□□□□□ -1
VTI1B-201ENST00000216456 KRTAP2-2Q9BYT5 123 aa8.8□□□□□ -1
VTI1B-201ENST00000216456 KRTAP2-1Q9BYU5 128 aa8.8□□□□□ -1
VTI1B-201ENST00000216456 ACYP2P14621 99 aa8.77□□□□□ -1.01
VTI1B-201ENST00000216456 MT-ATP8P03928 68 aa8.74□□□□□ -1.01
VTI1B-201ENST00000216456 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
VTI1B-201ENST00000216456 SPTSSBQ8NFR3 76 aa8.63□□□□□ -1.03
VTI1B-201ENST00000216456 LCE3BQ5TA77 95 aa8.62□□□□□ -1.03
VTI1B-201ENST00000216456 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
VTI1B-201ENST00000216456 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
VTI1B-201ENST00000216456 SMIM20Q8N5G0 67 aa8.54□□□□□ -1.04
VTI1B-201ENST00000216456 K7ERU9 68 aa8.4□□□□□ -1.06
VTI1B-201ENST00000216456 CAMK2N1Q7Z7J9 78 aa8.39□□□□□ -1.07
VTI1B-201ENST00000216456 SPANXA2-OT1Q8N9U9 137 aa8.38□□□□□ -1.07
VTI1B-201ENST00000216456 KRTAP19-7Q3SYF9 63 aa8.35□□□□□ -1.07
VTI1B-201ENST00000216456 A0A0D9SG42 100 aa8.28□□□□□ -1.08
VTI1B-201ENST00000216456 MT1EP04732 61 aa8.27□□□□□ -1.09
VTI1B-201ENST00000216456 LCE5AQ5TCM9 118 aa8.27□□□□□ -1.09
VTI1B-201ENST00000216456 SERP2Q8N6R1 65 aa8.27□□□□□ -1.09
VTI1B-201ENST00000216456 COA5Q86WW8 74 aa8.26□□□□□ -1.09
VTI1B-201ENST00000216456 DSTQ03001 7570 aaKnown RBP8.26□□□□□ -1.09
VTI1B-201ENST00000216456 SPATA8Q6RVD6 105 aa8.22□□□□□ -1.09
VTI1B-201ENST00000216456 KRTAP19-3Q7Z4W3 81 aa8.21□□□□□ -1.1
VTI1B-201ENST00000216456 KRTAP4-9Q9BYQ8 210 aa8.16□□□□□ -1.1
VTI1B-201ENST00000216456 SPINT4Q6UDR6 99 aa8.13□□□□□ -1.11
VTI1B-201ENST00000216456 KRTAP19-5Q3LI72 72 aa8.1□□□□□ -1.11
VTI1B-201ENST00000216456 SERP1Q9Y6X1 66 aa8.1□□□□□ -1.11
VTI1B-201ENST00000216456 GPR98Q8WXG9 6306 aa8.07□□□□□ -1.12
VTI1B-201ENST00000216456 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
VTI1B-201ENST00000216456 SEC61GP60059 68 aa8.07□□□□□ -1.12
VTI1B-201ENST00000216456 A0A1B0GU33 70 aa8.05□□□□□ -1.12
VTI1B-201ENST00000216456 CYSTM1Q9H1C7 97 aa8.05□□□□□ -1.12
VTI1B-201ENST00000216456 COX7CP15954 63 aa7.96□□□□□ -1.14
VTI1B-201ENST00000216456 MT1GP13640 62 aa7.95□□□□□ -1.14
VTI1B-201ENST00000216456 H7BZZ5 65 aa7.94□□□□□ -1.14
VTI1B-201ENST00000216456 LCE1DQ5T752 114 aa7.9□□□□□ -1.14
VTI1B-201ENST00000216456 A8MU10 97 aa7.89□□□□□ -1.15
VTI1B-201ENST00000216456 MT1MQ8N339 61 aa7.89□□□□□ -1.15
VTI1B-201ENST00000216456 MT1LQ93083 61 aa7.87□□□□□ -1.15
VTI1B-201ENST00000216456 KRTAP4-3Q9BYR4 195 aa7.84□□□□□ -1.15
VTI1B-201ENST00000216456 PP632Q6XCG6 107 aa7.83□□□□□ -1.16
VTI1B-201ENST00000216456 MT4P47944 62 aa7.81□□□□□ -1.16
VTI1B-201ENST00000216456 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
VTI1B-201ENST00000216456 A0A1B0GU69 56 aa7.79□□□□□ -1.16
VTI1B-201ENST00000216456 C10orf95Q9H7T3 257 aa7.79□□□□□ -1.16
VTI1B-201ENST00000216456 HMCN1Q96RW7 5635 aa7.77□□□□□ -1.17
VTI1B-201ENST00000216456 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
VTI1B-201ENST00000216456 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
VTI1B-201ENST00000216456 TNP1P09430 55 aa7.65□□□□□ -1.18
VTI1B-201ENST00000216456 KRTAP5-4Q6L8H1 288 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms