RNA–Protein interactions for RNA: ENST00000215730.11

SNAP29-201, Transcript of synaptosome associated protein 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAP29, Length 4,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-201ENST00000215730 KIAA1109Q2LD37 5005 aa7.42□□□□□ -1.22
SNAP29-201ENST00000215730 VPS13BQ7Z7G8 4022 aa7.42□□□□□ -1.22
SNAP29-201ENST00000215730 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.22
SNAP29-201ENST00000215730 RYR3Q15413 4870 aa7.37□□□□□ -1.23
SNAP29-201ENST00000215730 BIRC6Q9NR09 4857 aa7.33□□□□□ -1.24
SNAP29-201ENST00000215730 DYNC1H1Q14204 4646 aaKnown RBP7.32□□□□□ -1.24
SNAP29-201ENST00000215730 PKD1P98161 4303 aa7.29□□□□□ -1.24
SNAP29-201ENST00000215730 RYR1P21817 5038 aa7.29□□□□□ -1.24
SNAP29-201ENST00000215730 RYR2Q92736 4967 aa7.27□□□□□ -1.25
SNAP29-201ENST00000215730 FAT2Q9NYQ8 4349 aa7.26□□□□□ -1.25
SNAP29-201ENST00000215730 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
SNAP29-201ENST00000215730 KRTAP10-6P60371 365 aaPredicted RBP7.24□□□□□ -1.25
SNAP29-201ENST00000215730 KRTAP13-4Q3LI77 160 aa7.24□□□□□ -1.25
SNAP29-201ENST00000215730 SACSQ9NZJ4 4579 aa7.23□□□□□ -1.25
SNAP29-201ENST00000215730 KMT2CQ8NEZ4 4911 aaKnown RBP7.23□□□□□ -1.25
SNAP29-201ENST00000215730 R4GN34 69 aa7.22□□□□□ -1.25
SNAP29-201ENST00000215730 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
SNAP29-201ENST00000215730 FAT1Q14517 4588 aa7.21□□□□□ -1.26
SNAP29-201ENST00000215730 P0C880 135 aa7.19□□□□□ -1.26
SNAP29-201ENST00000215730 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
SNAP29-201ENST00000215730 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
SNAP29-201ENST00000215730 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
SNAP29-201ENST00000215730 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
SNAP29-201ENST00000215730 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
SNAP29-201ENST00000215730 PKHD1P08F94 4074 aa7.12□□□□□ -1.27
SNAP29-201ENST00000215730 HERC2O95714 4834 aa7.11□□□□□ -1.27
SNAP29-201ENST00000215730 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
SNAP29-201ENST00000215730 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
SNAP29-201ENST00000215730 M0QZ58 72 aa7.06□□□□□ -1.28
SNAP29-201ENST00000215730 NDUFAF8A1L188 74 aa7.02□□□□□ -1.29
SNAP29-201ENST00000215730 APOBP04114 4563 aaKnown RBP7□□□□□ -1.29
SNAP29-201ENST00000215730 PKHD1L1Q86WI1 4243 aa6.99□□□□□ -1.29
SNAP29-201ENST00000215730 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
SNAP29-201ENST00000215730 EPPK1P58107 5090 aaKnown RBP6.93□□□□□ -1.3
SNAP29-201ENST00000215730 FAT3Q8TDW7 4589 aa6.91□□□□□ -1.3
SNAP29-201ENST00000215730 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
SNAP29-201ENST00000215730 MYCBP2O75592 4640 aa6.88□□□□□ -1.31
SNAP29-201ENST00000215730 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
SNAP29-201ENST00000215730 HSPG2P98160 4391 aa6.81□□□□□ -1.32
SNAP29-201ENST00000215730 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
SNAP29-201ENST00000215730 TNXBP22105 4242 aa6.72□□□□□ -1.33
SNAP29-201ENST00000215730 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
SNAP29-201ENST00000215730 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
SNAP29-201ENST00000215730 PCLOQ9Y6V0 5065 aa6.62□□□□□ -1.35
SNAP29-201ENST00000215730 LUZP6Q538Z0 58 aa6.6□□□□□ -1.35
SNAP29-201ENST00000215730 KRTAP4-1Q9BYQ7 146 aa6.59□□□□□ -1.35
SNAP29-201ENST00000215730 LRP2P98164 4655 aa6.56□□□□□ -1.36
SNAP29-201ENST00000215730 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
SNAP29-201ENST00000215730 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
SNAP29-201ENST00000215730 LPAP08519 4548 aa6.51□□□□□ -1.37
SNAP29-201ENST00000215730 HERC1Q15751 4861 aa6.5□□□□□ -1.37
SNAP29-201ENST00000215730 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
SNAP29-201ENST00000215730 MT1HP80294 61 aa6.48□□□□□ -1.37
SNAP29-201ENST00000215730 TNP1P09430 55 aa6.35□□□□□ -1.39
SNAP29-201ENST00000215730 MT2AP02795 61 aa6.22□□□□□ -1.41
SNAP29-201ENST00000215730 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
SNAP29-201ENST00000215730 MUC17Q685J3 4493 aa6.13□□□□□ -1.43
SNAP29-201ENST00000215730 RNF213Q63HN8 5207 aa6.12□□□□□ -1.43
SNAP29-201ENST00000215730 MT1FP04733 61 aa6.11□□□□□ -1.43
SNAP29-201ENST00000215730 HMCN2Q8NDA2 5059 aa6.1□□□□□ -1.43
SNAP29-201ENST00000215730 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
SNAP29-201ENST00000215730 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
SNAP29-201ENST00000215730 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
SNAP29-201ENST00000215730 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
SNAP29-201ENST00000215730 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
SNAP29-201ENST00000215730 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
SNAP29-201ENST00000215730 FAT4Q6V0I7 4981 aa5.92□□□□□ -1.46
SNAP29-201ENST00000215730 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
SNAP29-201ENST00000215730 KRTAP9-8Q9BYQ0 159 aa5.9□□□□□ -1.47
SNAP29-201ENST00000215730 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
SNAP29-201ENST00000215730 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
SNAP29-201ENST00000215730 MUC2Q02817 5179 aa5.87□□□□□ -1.47
SNAP29-201ENST00000215730 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
SNAP29-201ENST00000215730 KRTAP9-6A0A140TA67 174 aa5.86□□□□□ -1.47
SNAP29-201ENST00000215730 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
SNAP29-201ENST00000215730 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.48
SNAP29-201ENST00000215730 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
SNAP29-201ENST00000215730 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
SNAP29-201ENST00000215730 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
SNAP29-201ENST00000215730 LCE2BO14633 110 aa5.67□□□□□ -1.5
SNAP29-201ENST00000215730 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
SNAP29-201ENST00000215730 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.51
SNAP29-201ENST00000215730 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
SNAP29-201ENST00000215730 INE1O15225 51 aa5.57□□□□□ -1.52
SNAP29-201ENST00000215730 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
SNAP29-201ENST00000215730 MT1BP07438 61 aa5.54□□□□□ -1.52
SNAP29-201ENST00000215730 MT1XP80297 61 aa5.48□□□□□ -1.53
SNAP29-201ENST00000215730 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
SNAP29-201ENST00000215730 SPRR2EP22531 72 aa5.43□□□□□ -1.54
SNAP29-201ENST00000215730 SPRR2BP35325 72 aa5.43□□□□□ -1.54
SNAP29-201ENST00000215730 SPRR2AP35326 72 aa5.43□□□□□ -1.54
SNAP29-201ENST00000215730 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
SNAP29-201ENST00000215730 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.55
SNAP29-201ENST00000215730 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
SNAP29-201ENST00000215730 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
SNAP29-201ENST00000215730 SPRR2DP22532 72 aa5.25□□□□□ -1.57
SNAP29-201ENST00000215730 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
SNAP29-201ENST00000215730 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
SNAP29-201ENST00000215730 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
SNAP29-201ENST00000215730 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms