RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 ALMS1Q8TCU4 4167 aa5.89□□□□□ -1.47
ACTN1-201ENST00000193403 HECTD4Q9Y4D8 3996 aa5.89□□□□□ -1.47
ACTN1-201ENST00000193403 DYNC1H1Q14204 4646 aaKnown RBP5.89□□□□□ -1.47
ACTN1-201ENST00000193403 RYR3Q15413 4870 aa5.86□□□□□ -1.47
ACTN1-201ENST00000193403 RPS29P62273 56 aaKnown RBP5.85□□□□□ -1.47
ACTN1-201ENST00000193403 A0A1B0GVY2 172 aa5.83□□□□□ -1.48
ACTN1-201ENST00000193403 NDUFAF8A1L188 74 aa5.82□□□□□ -1.48
ACTN1-201ENST00000193403 RYR2Q92736 4967 aa5.8□□□□□ -1.48
ACTN1-201ENST00000193403 VPS13BQ7Z7G8 4022 aa5.8□□□□□ -1.48
ACTN1-201ENST00000193403 P0C880 135 aa5.8□□□□□ -1.48
ACTN1-201ENST00000193403 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
ACTN1-201ENST00000193403 APOBP04114 4563 aaKnown RBP5.77□□□□□ -1.49
ACTN1-201ENST00000193403 LRP1Q07954 4544 aaKnown RBP5.77□□□□□ -1.49
ACTN1-201ENST00000193403 FAT2Q9NYQ8 4349 aa5.76□□□□□ -1.49
ACTN1-201ENST00000193403 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
ACTN1-201ENST00000193403 RYR1P21817 5038 aa5.75□□□□□ -1.49
ACTN1-201ENST00000193403 EPPK1P58107 5090 aaKnown RBP5.75□□□□□ -1.49
ACTN1-201ENST00000193403 TPRXLQ17RH7 258 aa5.75□□□□□ -1.49
ACTN1-201ENST00000193403 R4GN34 69 aa5.75□□□□□ -1.49
ACTN1-201ENST00000193403 M0QZ58 72 aa5.75□□□□□ -1.49
ACTN1-201ENST00000193403 FAT3Q8TDW7 4589 aa5.74□□□□□ -1.49
ACTN1-201ENST00000193403 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
ACTN1-201ENST00000193403 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
ACTN1-201ENST00000193403 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
ACTN1-201ENST00000193403 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.5
ACTN1-201ENST00000193403 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
ACTN1-201ENST00000193403 PKD1P98161 4303 aa5.69□□□□□ -1.5
ACTN1-201ENST00000193403 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
ACTN1-201ENST00000193403 XP32Q5T750 250 aa5.66□□□□□ -1.5
ACTN1-201ENST00000193403 KRTAP17-1Q9BYP8 105 aa5.64□□□□□ -1.51
ACTN1-201ENST00000193403 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
ACTN1-201ENST00000193403 HSPG2P98160 4391 aa5.54□□□□□ -1.52
ACTN1-201ENST00000193403 KRTAP10-4P60372 401 aaPredicted RBP5.54□□□□□ -1.52
ACTN1-201ENST00000193403 M0R2T5 61 aa5.52□□□□□ -1.53
ACTN1-201ENST00000193403 HERC2O95714 4834 aa5.5□□□□□ -1.53
ACTN1-201ENST00000193403 LCE2AQ5TA79 106 aaPredicted RBP5.5□□□□□ -1.53
ACTN1-201ENST00000193403 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
ACTN1-201ENST00000193403 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
ACTN1-201ENST00000193403 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
ACTN1-201ENST00000193403 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
ACTN1-201ENST00000193403 LRP2P98164 4655 aa5.41□□□□□ -1.54
ACTN1-201ENST00000193403 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
ACTN1-201ENST00000193403 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
ACTN1-201ENST00000193403 LPAP08519 4548 aa5.38□□□□□ -1.55
ACTN1-201ENST00000193403 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
ACTN1-201ENST00000193403 HERC1Q15751 4861 aa5.36□□□□□ -1.55
ACTN1-201ENST00000193403 PKHD1L1Q86WI1 4243 aa5.31□□□□□ -1.56
ACTN1-201ENST00000193403 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
ACTN1-201ENST00000193403 MUC2Q02817 5179 aa5.28□□□□□ -1.56
ACTN1-201ENST00000193403 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
ACTN1-201ENST00000193403 PCLOQ9Y6V0 5065 aa5.25□□□□□ -1.57
ACTN1-201ENST00000193403 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
ACTN1-201ENST00000193403 TNXBP22105 4242 aa5.19□□□□□ -1.58
ACTN1-201ENST00000193403 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.58
ACTN1-201ENST00000193403 TNP1P09430 55 aa5.14□□□□□ -1.59
ACTN1-201ENST00000193403 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
ACTN1-201ENST00000193403 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
ACTN1-201ENST00000193403 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
ACTN1-201ENST00000193403 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
ACTN1-201ENST00000193403 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
ACTN1-201ENST00000193403 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
ACTN1-201ENST00000193403 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
ACTN1-201ENST00000193403 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
ACTN1-201ENST00000193403 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
ACTN1-201ENST00000193403 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
ACTN1-201ENST00000193403 MUC17Q685J3 4493 aa4.65□□□□□ -1.67
ACTN1-201ENST00000193403 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
ACTN1-201ENST00000193403 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
ACTN1-201ENST00000193403 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
ACTN1-201ENST00000193403 MT1HP80294 61 aa4.6□□□□□ -1.67
ACTN1-201ENST00000193403 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
ACTN1-201ENST00000193403 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
ACTN1-201ENST00000193403 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
ACTN1-201ENST00000193403 USH2AO75445 5202 aa4.55□□□□□ -1.68
ACTN1-201ENST00000193403 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
ACTN1-201ENST00000193403 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
ACTN1-201ENST00000193403 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
ACTN1-201ENST00000193403 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
ACTN1-201ENST00000193403 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
ACTN1-201ENST00000193403 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
ACTN1-201ENST00000193403 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
ACTN1-201ENST00000193403 MT1FP04733 61 aa4.47□□□□□ -1.69
ACTN1-201ENST00000193403 MT2AP02795 61 aa4.44□□□□□ -1.7
ACTN1-201ENST00000193403 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
ACTN1-201ENST00000193403 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
ACTN1-201ENST00000193403 INE1O15225 51 aa4.38□□□□□ -1.71
ACTN1-201ENST00000193403 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
ACTN1-201ENST00000193403 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
ACTN1-201ENST00000193403 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
ACTN1-201ENST00000193403 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
ACTN1-201ENST00000193403 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
ACTN1-201ENST00000193403 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
ACTN1-201ENST00000193403 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
ACTN1-201ENST00000193403 MT1XP80297 61 aa4.28□□□□□ -1.72
ACTN1-201ENST00000193403 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
ACTN1-201ENST00000193403 MT1BP07438 61 aa4.25□□□□□ -1.73
ACTN1-201ENST00000193403 KMT2DO14686 5537 aa4.24□□□□□ -1.73
ACTN1-201ENST00000193403 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
ACTN1-201ENST00000193403 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
ACTN1-201ENST00000193403 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms