RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 PKHD1L1Q86WI1 4243 aa7.83□□□□□ -1.16
TMEM38A-201ENST00000187762 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
TMEM38A-201ENST00000187762 A0A0D9SG42 100 aa7.79□□□□□ -1.16
TMEM38A-201ENST00000187762 KRTAP10-4P60372 401 aaPredicted RBP7.78□□□□□ -1.16
TMEM38A-201ENST00000187762 KRTAP13-4Q3LI77 160 aa7.78□□□□□ -1.16
TMEM38A-201ENST00000187762 A0A1B0GVY2 172 aa7.77□□□□□ -1.17
TMEM38A-201ENST00000187762 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
TMEM38A-201ENST00000187762 RYR2Q92736 4967 aa7.73□□□□□ -1.17
TMEM38A-201ENST00000187762 KRTAP21-3Q3LHN1 58 aa7.7□□□□□ -1.18
TMEM38A-201ENST00000187762 KMT2CQ8NEZ4 4911 aaKnown RBP7.68□□□□□ -1.18
TMEM38A-201ENST00000187762 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
TMEM38A-201ENST00000187762 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
TMEM38A-201ENST00000187762 S4R3F8 94 aa7.63□□□□□ -1.19
TMEM38A-201ENST00000187762 FAT3Q8TDW7 4589 aa7.62□□□□□ -1.19
TMEM38A-201ENST00000187762 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
TMEM38A-201ENST00000187762 LUZP6Q538Z0 58 aa7.58□□□□□ -1.2
TMEM38A-201ENST00000187762 TNXBP22105 4242 aa7.58□□□□□ -1.2
TMEM38A-201ENST00000187762 KRTAP12-2P59991 146 aa7.57□□□□□ -1.2
TMEM38A-201ENST00000187762 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
TMEM38A-201ENST00000187762 HSPG2P98160 4391 aa7.53□□□□□ -1.2
TMEM38A-201ENST00000187762 XP32Q5T750 250 aa7.52□□□□□ -1.21
TMEM38A-201ENST00000187762 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
TMEM38A-201ENST00000187762 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
TMEM38A-201ENST00000187762 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
TMEM38A-201ENST00000187762 Q5VSD8 79 aa7.45□□□□□ -1.22
TMEM38A-201ENST00000187762 RYR3Q15413 4870 aa7.43□□□□□ -1.22
TMEM38A-201ENST00000187762 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.22
TMEM38A-201ENST00000187762 RYR1P21817 5038 aa7.4□□□□□ -1.23
TMEM38A-201ENST00000187762 KIAA1109Q2LD37 5005 aa7.34□□□□□ -1.23
TMEM38A-201ENST00000187762 PLAC4Q8WY50 150 aa7.32□□□□□ -1.24
TMEM38A-201ENST00000187762 LPAP08519 4548 aa7.29□□□□□ -1.24
TMEM38A-201ENST00000187762 MT1HL1P0DM35 61 aa7.25□□□□□ -1.25
TMEM38A-201ENST00000187762 LRP2P98164 4655 aa7.21□□□□□ -1.25
TMEM38A-201ENST00000187762 M0QZ58 72 aa7.2□□□□□ -1.26
TMEM38A-201ENST00000187762 EPPK1P58107 5090 aaKnown RBP7.18□□□□□ -1.26
TMEM38A-201ENST00000187762 ABCA13Q86UQ4 5058 aa7.11□□□□□ -1.27
TMEM38A-201ENST00000187762 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
TMEM38A-201ENST00000187762 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
TMEM38A-201ENST00000187762 R4GN34 69 aa6.9□□□□□ -1.31
TMEM38A-201ENST00000187762 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
TMEM38A-201ENST00000187762 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
TMEM38A-201ENST00000187762 KRTAP4-1Q9BYQ7 146 aa6.8□□□□□ -1.32
TMEM38A-201ENST00000187762 HERC2O95714 4834 aa6.74□□□□□ -1.33
TMEM38A-201ENST00000187762 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
TMEM38A-201ENST00000187762 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.34
TMEM38A-201ENST00000187762 J3QL48 77 aa6.71□□□□□ -1.34
TMEM38A-201ENST00000187762 CAMK2N1Q7Z7J9 78 aa6.68□□□□□ -1.34
TMEM38A-201ENST00000187762 MUC2Q02817 5179 aa6.65□□□□□ -1.34
TMEM38A-201ENST00000187762 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
TMEM38A-201ENST00000187762 KRTAP19-2Q3LHN2 52 aa6.63□□□□□ -1.35
TMEM38A-201ENST00000187762 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
TMEM38A-201ENST00000187762 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
TMEM38A-201ENST00000187762 TNP1P09430 55 aa6.46□□□□□ -1.38
TMEM38A-201ENST00000187762 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.38
TMEM38A-201ENST00000187762 HERC1Q15751 4861 aa6.45□□□□□ -1.38
TMEM38A-201ENST00000187762 PCLOQ9Y6V0 5065 aa6.44□□□□□ -1.38
TMEM38A-201ENST00000187762 INE1O15225 51 aa6.42□□□□□ -1.38
TMEM38A-201ENST00000187762 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
TMEM38A-201ENST00000187762 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
TMEM38A-201ENST00000187762 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
TMEM38A-201ENST00000187762 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
TMEM38A-201ENST00000187762 UBR4Q5T4S7 5183 aa6.13□□□□□ -1.43
TMEM38A-201ENST00000187762 M0R2T5 61 aa6.11□□□□□ -1.43
TMEM38A-201ENST00000187762 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
TMEM38A-201ENST00000187762 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
TMEM38A-201ENST00000187762 MT1HP80294 61 aa6.07□□□□□ -1.44
TMEM38A-201ENST00000187762 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
TMEM38A-201ENST00000187762 MT1FP04733 61 aa5.99□□□□□ -1.45
TMEM38A-201ENST00000187762 MT2AP02795 61 aa5.98□□□□□ -1.45
TMEM38A-201ENST00000187762 KRTAP10-10P60014 251 aa5.96□□□□□ -1.45
TMEM38A-201ENST00000187762 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
TMEM38A-201ENST00000187762 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
TMEM38A-201ENST00000187762 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
TMEM38A-201ENST00000187762 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
TMEM38A-201ENST00000187762 MT1BP07438 61 aa5.78□□□□□ -1.48
TMEM38A-201ENST00000187762 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
TMEM38A-201ENST00000187762 KRTAP10-5P60370 271 aa5.75□□□□□ -1.49
TMEM38A-201ENST00000187762 MT1XP80297 61 aa5.74□□□□□ -1.49
TMEM38A-201ENST00000187762 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
TMEM38A-201ENST00000187762 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
TMEM38A-201ENST00000187762 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
TMEM38A-201ENST00000187762 USH2AO75445 5202 aa5.52□□□□□ -1.53
TMEM38A-201ENST00000187762 LCE2BO14633 110 aa5.48□□□□□ -1.53
TMEM38A-201ENST00000187762 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
TMEM38A-201ENST00000187762 KMT2DO14686 5537 aa5.43□□□□□ -1.54
TMEM38A-201ENST00000187762 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
TMEM38A-201ENST00000187762 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
TMEM38A-201ENST00000187762 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
TMEM38A-201ENST00000187762 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
TMEM38A-201ENST00000187762 LCE2AQ5TA79 106 aaPredicted RBP5.33□□□□□ -1.56
TMEM38A-201ENST00000187762 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
TMEM38A-201ENST00000187762 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
TMEM38A-201ENST00000187762 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
TMEM38A-201ENST00000187762 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
TMEM38A-201ENST00000187762 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
TMEM38A-201ENST00000187762 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
TMEM38A-201ENST00000187762 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
TMEM38A-201ENST00000187762 MT1EP04732 61 aa4.95□□□□□ -1.62
TMEM38A-201ENST00000187762 MT1LQ93083 61 aa4.95□□□□□ -1.62
TMEM38A-201ENST00000187762 FSIP2Q5CZC0 6907 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms