RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
PDZD4-201ENST00000164640 DNHD1Q96M86 4753 aa7.56□□□□□ -1.2
PDZD4-201ENST00000164640 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
PDZD4-201ENST00000164640 FAT1Q14517 4588 aa7.53□□□□□ -1.2
PDZD4-201ENST00000164640 M0QZ58 72 aa7.53□□□□□ -1.2
PDZD4-201ENST00000164640 LUZP6Q538Z0 58 aa7.51□□□□□ -1.21
PDZD4-201ENST00000164640 R4GN34 69 aa7.49□□□□□ -1.21
PDZD4-201ENST00000164640 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
PDZD4-201ENST00000164640 XP32Q5T750 250 aa7.47□□□□□ -1.21
PDZD4-201ENST00000164640 HYDINQ4G0P3 5121 aa7.45□□□□□ -1.22
PDZD4-201ENST00000164640 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
PDZD4-201ENST00000164640 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
PDZD4-201ENST00000164640 PKHD1P08F94 4074 aa7.38□□□□□ -1.23
PDZD4-201ENST00000164640 DYNC1H1Q14204 4646 aaKnown RBP7.35□□□□□ -1.23
PDZD4-201ENST00000164640 SACSQ9NZJ4 4579 aa7.33□□□□□ -1.24
PDZD4-201ENST00000164640 PKD1P98161 4303 aa7.32□□□□□ -1.24
PDZD4-201ENST00000164640 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
PDZD4-201ENST00000164640 Q5VSD8 79 aa7.3□□□□□ -1.24
PDZD4-201ENST00000164640 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
PDZD4-201ENST00000164640 APOBP04114 4563 aaKnown RBP7.23□□□□□ -1.25
PDZD4-201ENST00000164640 LRP1Q07954 4544 aaKnown RBP7.22□□□□□ -1.25
PDZD4-201ENST00000164640 KRTAP21-3Q3LHN1 58 aa7.2□□□□□ -1.26
PDZD4-201ENST00000164640 HSPG2P98160 4391 aa7.16□□□□□ -1.26
PDZD4-201ENST00000164640 A0A1B0GVY2 172 aa7.15□□□□□ -1.26
PDZD4-201ENST00000164640 FAT3Q8TDW7 4589 aa7.06□□□□□ -1.28
PDZD4-201ENST00000164640 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
PDZD4-201ENST00000164640 LPAP08519 4548 aa6.97□□□□□ -1.29
PDZD4-201ENST00000164640 PP632Q6XCG6 107 aa6.97□□□□□ -1.29
PDZD4-201ENST00000164640 LRP2P98164 4655 aa6.97□□□□□ -1.29
PDZD4-201ENST00000164640 PKHD1L1Q86WI1 4243 aa6.97□□□□□ -1.29
PDZD4-201ENST00000164640 KMT2CQ8NEZ4 4911 aaKnown RBP6.9□□□□□ -1.3
PDZD4-201ENST00000164640 SEC61BP60468 96 aaKnown RBP6.86□□□□□ -1.31
PDZD4-201ENST00000164640 TNP1P09430 55 aa6.85□□□□□ -1.31
PDZD4-201ENST00000164640 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
PDZD4-201ENST00000164640 TNXBP22105 4242 aa6.77□□□□□ -1.33
PDZD4-201ENST00000164640 J3QL48 77 aa6.71□□□□□ -1.33
PDZD4-201ENST00000164640 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
PDZD4-201ENST00000164640 RYR1P21817 5038 aa6.69□□□□□ -1.34
PDZD4-201ENST00000164640 KRTAP17-1Q9BYP8 105 aa6.69□□□□□ -1.34
PDZD4-201ENST00000164640 RYR2Q92736 4967 aa6.59□□□□□ -1.35
PDZD4-201ENST00000164640 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
PDZD4-201ENST00000164640 RYR3Q15413 4870 aa6.56□□□□□ -1.36
PDZD4-201ENST00000164640 M0R2T5 61 aa6.48□□□□□ -1.37
PDZD4-201ENST00000164640 ABCA13Q86UQ4 5058 aa6.47□□□□□ -1.37
PDZD4-201ENST00000164640 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.37
PDZD4-201ENST00000164640 MUC2Q02817 5179 aa6.37□□□□□ -1.39
PDZD4-201ENST00000164640 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
PDZD4-201ENST00000164640 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
PDZD4-201ENST00000164640 LCE3AQ5TA76 89 aa6.33□□□□□ -1.4
PDZD4-201ENST00000164640 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
PDZD4-201ENST00000164640 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
PDZD4-201ENST00000164640 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
PDZD4-201ENST00000164640 INE1O15225 51 aa6.19□□□□□ -1.42
PDZD4-201ENST00000164640 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
PDZD4-201ENST00000164640 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.42
PDZD4-201ENST00000164640 HERC2O95714 4834 aa6.09□□□□□ -1.43
PDZD4-201ENST00000164640 BIRC6Q9NR09 4857 aa6.08□□□□□ -1.44
PDZD4-201ENST00000164640 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
PDZD4-201ENST00000164640 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
PDZD4-201ENST00000164640 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
PDZD4-201ENST00000164640 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
PDZD4-201ENST00000164640 PCLOQ9Y6V0 5065 aa5.98□□□□□ -1.45
PDZD4-201ENST00000164640 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
PDZD4-201ENST00000164640 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
PDZD4-201ENST00000164640 HERC1Q15751 4861 aa5.94□□□□□ -1.46
PDZD4-201ENST00000164640 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
PDZD4-201ENST00000164640 MT1FP04733 61 aa5.82□□□□□ -1.48
PDZD4-201ENST00000164640 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
PDZD4-201ENST00000164640 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
PDZD4-201ENST00000164640 MT2AP02795 61 aa5.77□□□□□ -1.49
PDZD4-201ENST00000164640 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
PDZD4-201ENST00000164640 LCE2CQ5TA81 110 aa5.75□□□□□ -1.49
PDZD4-201ENST00000164640 MT1HP80294 61 aa5.73□□□□□ -1.49
PDZD4-201ENST00000164640 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
PDZD4-201ENST00000164640 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
PDZD4-201ENST00000164640 MT1XP80297 61 aa5.7□□□□□ -1.5
PDZD4-201ENST00000164640 MT1BP07438 61 aa5.61□□□□□ -1.51
PDZD4-201ENST00000164640 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
PDZD4-201ENST00000164640 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
PDZD4-201ENST00000164640 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
PDZD4-201ENST00000164640 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
PDZD4-201ENST00000164640 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
PDZD4-201ENST00000164640 KMT2DO14686 5537 aa5.48□□□□□ -1.53
PDZD4-201ENST00000164640 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.54
PDZD4-201ENST00000164640 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
PDZD4-201ENST00000164640 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
PDZD4-201ENST00000164640 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
PDZD4-201ENST00000164640 USH2AO75445 5202 aa5.36□□□□□ -1.55
PDZD4-201ENST00000164640 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
PDZD4-201ENST00000164640 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
PDZD4-201ENST00000164640 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
PDZD4-201ENST00000164640 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
PDZD4-201ENST00000164640 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
PDZD4-201ENST00000164640 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.59
PDZD4-201ENST00000164640 LCE2BO14633 110 aa5.11□□□□□ -1.59
PDZD4-201ENST00000164640 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
PDZD4-201ENST00000164640 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
PDZD4-201ENST00000164640 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
PDZD4-201ENST00000164640 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
PDZD4-201ENST00000164640 MT1LQ93083 61 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms